Gene ontology annotations for RPS15A
Experiment description of studies that identified RPS15A in sEVs
1
Experiment ID
79
MISEV standards
✘
Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20458337
Organism
Homo sapiens
Experiment description
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors
"Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name
ICB
Publication year
2010
Sample
B cells
Sample name
RN (HLA-DR15)
Isolation/purification methods
Differential centrifugation Sucrose density gradient Immunobeads (MHC Class II)
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [FT-ICR] Western blotting
2
Experiment ID
80
MISEV standards
✘
Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20458337
Organism
Homo sapiens
Experiment description
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis -Sample 2
Authors
"Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name
ICB
Publication year
2010
Sample
B cells
Sample name
RN (HLA-DR15)
Isolation/purification methods
Differential centrifugation Sucrose density gradient Immunobeads (MHC Class II)
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [FT-ICR] Western blotting
3
Experiment ID
81
MISEV standards
✘
Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20458337
Organism
Homo sapiens
Experiment description
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors
"Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name
ICB
Publication year
2010
Sample
B cells
Sample name
RN (HLA-DR15)
Isolation/purification methods
Differential centrifugation Sucrose density gradient Immunobeads (MHC Class II)
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [FT-ICR] Western blotting
4
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
7
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
8
Experiment ID
412
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Breast cancer cells
Sample name
MCF7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
9
Experiment ID
414
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Breast cancer cells
Sample name
MDA-MB-231
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
10
Experiment ID
426
MISEV standards
✘
Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Breast cancer cells
Sample name
MDA-MB-231 - Exo-rich fractions 7-10 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
11
Experiment ID
427
MISEV standards
✘
Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Breast cancer cells
Sample name
MDA-MB-231 - Exo-rich fractions 1-6 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
12
Experiment ID
497
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
13
Experiment ID
498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
14
Experiment ID
20
MISEV standards
✔
EM
Biophysical techniques
✔
HSP90|CD63|CD81|LAMP1
Enriched markers
✔
GOLGA2|cytochrome c
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
17956143
Organism
Homo sapiens
Experiment description
Proteomic analysis of microvesicles derived from human colorectal cancer cells.
Authors
"Choi DS, Lee JM, Park GW, Lim HW, Bang JY, Kim YK, Kwon KH, Kwon HJ, Kim KP, Gho YS"
Journal name
JPR
Publication year
2007
Sample
Colorectal cancer cells
Sample name
HT29
Isolation/purification methods
Differential centrifugation Sucrose density gradient Diafiltration
Flotation density
1.16 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LTQ] Western blotting
15
Experiment ID
21
MISEV standards
✔
EM|IEM
Biophysical techniques
✔
Alix|TSG101|HSP70|CD63
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
PubMed ID
19837982
Organism
Homo sapiens
Experiment description
Proteomic and bioinformatic analysis of immunoaffinity-purified exosomes derived from the human colon tumor cell line LIM1215.
Authors
"Suresh Mathivanan, Justin W.E. Lim, Bow J. Tauro, Hong Ji, Robert L. Moritz and Richard J. Simpson"
Journal name
MCP
Publication year
2009
Sample
Colorectal cancer cells
Sample name
LIM1215
Isolation/purification methods
Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.10-1.12 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [Orbitrap] Western blotting
16
Experiment ID
282
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘
Negative markers
✔
DLS
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25890246
Organism
Homo sapiens
Experiment description
Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors
"Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name
Methods
Publication year
2015
Sample
Colorectal cancer cells
Sample name
LIM1863 - Ultracentrifugation - Rep 1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Centrifugal concentration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry Western blotting
17
Experiment ID
283
MISEV standards
✔
CEM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81|EpCAM
Enriched markers
✘
Negative markers
✔
DLS
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25890246
Organism
Homo sapiens
Experiment description
Highly-purified exosomes and shed microvesicles isolated from the human colon cancer cell line LIM1863 by sequential centrifugal ultrafiltration are biochemically and functionally distinct.
Authors
"Xu R, Greening DW, Rai A, Ji H, Simpson RJ."
Journal name
Methods
Publication year
2015
Sample
Colorectal cancer cells
Sample name
LIM1863 - Ultracentrifugation - Rep 2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Centrifugal concentration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry Western blotting
18
Experiment ID
1203
MISEV standards
✔
EM
Biophysical techniques
✔
SDCBP|FLOT1|CD9|CD81|CD63|EPCAM|GAPDH|LAMP1|TFRC|CD151|CD82|LAMP2|RAB35|TSG101|FLOT2|RAB5B|ICAM1|RAB5A
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34887515
Organism
Homo sapiens
Experiment description
Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets
Authors
"Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Colorectal cancer cells
Sample name
DiFi
Isolation/purification methods
Differential centrifugation Filtration Centrifugal ultrafiltration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein miRNA
Methods used in the study
Western blotting Mass spectrometry RNA sequencing
19
Experiment ID
407
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|TSG101|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Embryonic kidney cells
Sample name
HEK293T
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
20
Experiment ID
419
MISEV standards
✘
Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Embryonic kidney cells
Sample name
HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
21
Experiment ID
419
MISEV standards
✘
Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Embryonic kidney cells
Sample name
HEK293T - Exo-rich fractions 7-10 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
22
Experiment ID
420
MISEV standards
✘
Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Embryonic kidney cells
Sample name
HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
23
Experiment ID
420
MISEV standards
✘
Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Embryonic kidney cells
Sample name
HEK293T - Exo-rich fractions 1-6 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
24
Experiment ID
405
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Foreskin fibroblasts
Sample name
BJ
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
25
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
26
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
27
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
28
Experiment ID
417
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Lymphoma cells
Sample name
Raji
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
29
Experiment ID
411
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Mammary cancer-associated fibroblasts
Sample name
mCAF
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
30
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
31
Experiment ID
418
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Monocytic leukemia cells
Sample name
THP-1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
32
Experiment ID
224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25944692
Organism
Homo sapiens
Experiment description
Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors
"Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name
Oncotarget
Publication year
2015
Sample
Neuroblastoma cells
Sample name
SH-SY5Y
Isolation/purification methods
Differential centrifugation Ultracentrifugation OptiPrep density gradient
Flotation density
1.10 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry Western blotting
33
Experiment ID
413
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Normal mammary epithelial cells
Sample name
MCF10A
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
34
Experiment ID
406
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35|CD81
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic cancer cells
Sample name
BxPC3
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
35
Experiment ID
415
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic cancer cells
Sample name
PANC-1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
36
Experiment ID
434
MISEV standards
✘
Biophysical techniques
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic cancer cells
Sample name
PANC-1 - Exo-rich fractions 7-10 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
37
Experiment ID
435
MISEV standards
✘
Biophysical techniques
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
Enriched markers
✔
CANX
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic cancer cells
Sample name
PANC-1 - Exo-rich fractions 1-6 pooled
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
38
Experiment ID
408
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD63|CD81|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX|ACTB
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic duct epithalial cells
Sample name
HPDE
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
39
Experiment ID
409
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pancreatic duct epithalial cells
Sample name
HPNE
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
40
Experiment ID
416
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD9|CD63|SDCBP|LAMP1|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Pluripotent stem cells
Sample name
PSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
41
Experiment ID
834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
42
Experiment ID
835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
43
Experiment ID
410
MISEV standards
✔
EM
Biophysical techniques
✔
CD81|CD63|SDCBP|LAMP1|CD9|GAPDH|FLOT1|TFRC|FLOT2|TSG101|RAB35
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
34108659
Organism
Homo sapiens
Experiment description
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker
Authors
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R."
Journal name
Nat Cell Biol
Publication year
2021
Sample
T lymphocytes
Sample name
Jurkat
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein mRNA
Methods used in the study
RT-qPCR Western blotting Mass spectrometry Flow cytometry
44
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for RPS15A
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
RPSA
3921
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
2
SRP19
6728
Affinity Capture-MS
Homo sapiens
3
RIT1
6016
Negative Genetic
Homo sapiens
4
RPSAP58
388524
Affinity Capture-MS
Homo sapiens
5
UBE2H
7328
Affinity Capture-MS
Homo sapiens
6
RIOK1
83732
Co-crystal Structure
Homo sapiens
7
SPRTN
Affinity Capture-MS
Homo sapiens
8
NOP58
51602
Co-fractionation
Homo sapiens
9
UBL4A
8266
Affinity Capture-MS
Homo sapiens
10
RPS28
6234
Co-fractionation
Homo sapiens
11
COIL
Proximity Label-MS
Homo sapiens
12
RPS3A
6189
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
13
VAPA
9218
Co-fractionation
Homo sapiens
14
EIF2S3
1968
Affinity Capture-MS
Homo sapiens
15
RPS4X
6191
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
16
RPL30
6156
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
17
RIN3
Affinity Capture-MS
Homo sapiens
18
PSMD11
5717
Co-fractionation
Homo sapiens
19
RPS26
6231
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
20
CSNK1A1
1452
Affinity Capture-MS
Homo sapiens
21
RPL13A
23521
Co-fractionation
Homo sapiens
22
RPL37A
6168
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
23
RPS15
6209
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
24
NOP56
10528
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
25
RPS19
6223
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
26
RPL10
6134
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
27
RPL15
6138
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
28
RPL14
9045
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
29
SSB
6741
Affinity Capture-MS
Homo sapiens
30
RPL12
6136
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
31
CALM1
801
Reconstituted Complex
Homo sapiens
32
CAND1
55832
Affinity Capture-MS
Homo sapiens
33
ZBTB1
Affinity Capture-MS
Homo sapiens
34
WDR26
80232
Co-fractionation
Homo sapiens
35
SOX2
Affinity Capture-MS
Homo sapiens
36
MPHOSPH10
10199
Co-fractionation
Homo sapiens
37
FAU
2197
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
38
RPS3
6188
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
39
ILF2
3608
Co-fractionation
Homo sapiens
40
GSK3A
2931
Affinity Capture-MS
Homo sapiens
41
ATG13
9776
Affinity Capture-MS
Homo sapiens
42
RPS18
6222
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
43
DIMT1
27292
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
44
RPS6
6194
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
45
PARK2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
46
RPL10A
4736
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
47
METAP2
10988
Affinity Capture-MS
Homo sapiens
48
BTF3
689
Affinity Capture-MS
Homo sapiens
49
B3GNT2
10678
Affinity Capture-MS
Homo sapiens
50
PRC1
9055
Affinity Capture-MS
Homo sapiens
51
RBM39
9584
Affinity Capture-MS
Homo sapiens
52
TGFB1
7040
Affinity Capture-MS
Homo sapiens
53
KIF23
9493
Affinity Capture-MS
Homo sapiens
54
PCK1
5105
Affinity Capture-MS
Homo sapiens
55
COPS6
10980
Affinity Capture-MS
Homo sapiens
56
IMP3
55272
Co-fractionation
Homo sapiens
57
EIF3B
8662
Affinity Capture-MS
Homo sapiens
58
COPS5
10987
Affinity Capture-MS
Homo sapiens
59
FBXW7
Affinity Capture-MS
Homo sapiens
60
RPL24
6152
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
61
CALD1
800
Affinity Capture-MS
Homo sapiens
62
PSMD9
5715
Affinity Capture-MS
Homo sapiens
63
NPM1
4869
Affinity Capture-MS
Homo sapiens
64
CALM3
808
Affinity Capture-MS
Homo sapiens
65
RPS8
6202
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
66
FBL
2091
Co-fractionation
Homo sapiens
67
PSMC6
5706
Co-fractionation
Homo sapiens
68
EWSR1
2130
Two-hybrid
Homo sapiens
69
RPS9
6203
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
70
GSPT1
2935
Affinity Capture-MS
Homo sapiens
71
KRAS
3845
Negative Genetic
Homo sapiens
72
BAG5
9529
Affinity Capture-MS
Homo sapiens
73
RC3H1
149041
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
74
ITGA4
3676
Affinity Capture-MS
Homo sapiens
75
SRP68
6730
Affinity Capture-MS
Homo sapiens
76
RPL29
6159
Co-fractionation
Homo sapiens
77
DDX18
8886
Co-fractionation
Homo sapiens
78
VCAM1
7412
Affinity Capture-MS
Homo sapiens
79
CEP57
Affinity Capture-MS
Homo sapiens
80
SFN
2810
Affinity Capture-MS
Homo sapiens
81
ZNF346
Affinity Capture-MS
Homo sapiens
82
MRPS7
51081
Co-fractionation
Homo sapiens
83
Eif3i
54709
Affinity Capture-MS
Mus musculus
84
MECP2
4204
Affinity Capture-MS
Homo sapiens
85
Eif3a
13669
Affinity Capture-MS
Mus musculus
86
CUL1
8454
Affinity Capture-MS
Homo sapiens
87
TFCP2
7024
Affinity Capture-MS
Homo sapiens
88
ARIH2
10425
Affinity Capture-MS
Homo sapiens
89
RBM42
Affinity Capture-MS
Homo sapiens
90
RPS11
6205
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
91
EEF1A1
1915
Co-fractionation
Homo sapiens
92
CTCF
Affinity Capture-MS
Homo sapiens
93
KIF14
9928
Affinity Capture-MS
Homo sapiens
94
RPL10L
140801
Co-fractionation
Homo sapiens
95
HSPA8
3312
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
96
ADSL
158
Affinity Capture-MS
Homo sapiens
97
EMC9
Affinity Capture-MS
Homo sapiens
98
PDZD8
118987
Affinity Capture-MS
Homo sapiens
99
TUBB4B
10383
Co-fractionation
Homo sapiens
100
CHMP4C
92421
Affinity Capture-MS
Homo sapiens
101
RPS23
6228
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
102
ACTA2
59
Co-fractionation
Homo sapiens
103
RPL27
6155
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
104
VRK3
51231
Affinity Capture-MS
Homo sapiens
105
ATP5A1
498
Co-fractionation
Homo sapiens
106
PNO1
56902
Co-fractionation
Homo sapiens
107
HNRNPA0
10949
Co-fractionation
Homo sapiens
108
RPS17
6218
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
109
DDX21
9188
Affinity Capture-MS
Homo sapiens
110
RPL9
6133
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
111
SRP14
6727
Affinity Capture-MS
Homo sapiens
112
KIF20A
10112
Affinity Capture-MS
Homo sapiens
113
TRIM31
Affinity Capture-MS
Homo sapiens
114
RPL4
6124
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
115
TUBG1
7283
Affinity Capture-MS
Homo sapiens
116
COPE
11316
Affinity Capture-MS
Homo sapiens
117
RPS10
6204
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
118
PSMC1
5700
Co-fractionation
Homo sapiens
119
PSMD14
10213
Affinity Capture-MS
Homo sapiens
120
TUFM
7284
Co-fractionation
Homo sapiens
121
FAT4
79633
Affinity Capture-MS
Homo sapiens
122
NOP2
4839
Co-fractionation
Homo sapiens
123
VRK1
7443
Affinity Capture-MS
Homo sapiens
124
RPL5
6125
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
125
TUBB2B
347733
Co-fractionation
Homo sapiens
126
RPL18A
6142
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
127
UBR5
51366
Affinity Capture-MS
Homo sapiens
128
Srp72
Affinity Capture-MS
Mus musculus
129
TUBB
203068
Co-fractionation
Homo sapiens
130
YAP1
10413
Affinity Capture-MS
Homo sapiens
131
TRIM21
6737
Affinity Capture-MS
Homo sapiens
132
GNL3
26354
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
133
RPL31
6160
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
134
MED12
Affinity Capture-MS
Homo sapiens
135
CTNNB1
1499
Affinity Capture-MS
Homo sapiens
136
API5
8539
Affinity Capture-MS
Homo sapiens
137
RPL36
25873
Co-fractionation
Homo sapiens
138
RPA4
Proximity Label-MS
Homo sapiens
139
RPLP1
6176
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
140
Rrbp1
Affinity Capture-MS
Mus musculus
141
HECTD1
25831
Affinity Capture-MS
Homo sapiens
142
ENY2
56943
Affinity Capture-MS
Homo sapiens
143
RPLP0
6175
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
144
CEP76
Affinity Capture-MS
Homo sapiens
145
RPLP0P6
220717
Co-fractionation
Homo sapiens
146
CDK9
1025
Affinity Capture-MS
Homo sapiens
147
ATG4B
23192
Affinity Capture-MS
Homo sapiens
148
Ksr1
Affinity Capture-MS
Mus musculus
149
MCM2
4171
Affinity Capture-MS
Homo sapiens
150
RAD21
5885
Affinity Capture-Western
Homo sapiens
151
LOC101929876
101929876
Co-fractionation
Homo sapiens
152
HMGB2
3148
Affinity Capture-MS
Homo sapiens
153
SLC25A5
292
Co-fractionation
Homo sapiens
154
MGMT
4255
Affinity Capture-MS
Homo sapiens
155
RPL11
6135
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
156
ANLN
54443
Affinity Capture-MS
Homo sapiens
157
MRPL14
64928
Co-fractionation
Homo sapiens
158
HIST1H2AD
3013
Co-fractionation
Homo sapiens
159
TMPO
7112
Affinity Capture-MS
Homo sapiens
160
RPL32
6161
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
161
DDX6
1656
Affinity Capture-MS
Homo sapiens
162
RHOU
58480
Reconstituted Complex
Homo sapiens
163
RPLP2
6181
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
164
FANCD2
Affinity Capture-MS
Homo sapiens
165
METTL14
Affinity Capture-MS
Homo sapiens
166
RPL23
9349
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
167
RPS2
6187
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
168
UBE3A
7337
Reconstituted Complex
Homo sapiens
169
EIF6
3692
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
170
RC3H2
Affinity Capture-MS
Homo sapiens
171
ECT2
1894
Affinity Capture-MS
Homo sapiens
172
DNAJC2
27000
Affinity Capture-MS
Homo sapiens
173
RPL35
11224
Co-fractionation
Homo sapiens
174
JADE1
Cross-Linking-MS (XL-MS)
Homo sapiens
175
SEC61B
10952
Affinity Capture-MS
Homo sapiens
176
EEF2
1938
Co-fractionation
Homo sapiens
177
UBE2L6
9246
Affinity Capture-MS
Homo sapiens
178
MRPS14
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
179
MRPL16
Co-fractionation
Homo sapiens
180
RLIM
51132
Affinity Capture-MS
Homo sapiens
181
CUL3
8452
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
182
RPS7
6201
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
183
RPL21
6144
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
184
RPL3
6122
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
185
EGFR
1956
Affinity Capture-MS
Homo sapiens
Negative Genetic
Homo sapiens
186
ACO2
50
Affinity Capture-MS
Homo sapiens
187
HNRNPA1
3178
Affinity Capture-MS
Homo sapiens
188
RIOK3
8780
Affinity Capture-MS
Homo sapiens
189
MYC
Affinity Capture-MS
Homo sapiens
190
RPL7
6129
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
191
WIBG
84305
Co-fractionation
Homo sapiens
192
VHL
Affinity Capture-MS
Homo sapiens
Reconstituted Complex
Homo sapiens
193
LARS
51520
Affinity Capture-MS
Homo sapiens
194
FN1
2335
Affinity Capture-MS
Homo sapiens
195
RPS27
6232
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
196
CDK2
1017
Affinity Capture-MS
Homo sapiens
197
CEP250
11190
Affinity Capture-MS
Homo sapiens
198
NCAPH
23397
Affinity Capture-MS
Homo sapiens
199
PCBP1
5093
Affinity Capture-MS
Homo sapiens
200
UBA2
10054
Co-fractionation
Homo sapiens
201
PSPC1
55269
Affinity Capture-MS
Homo sapiens
202
RPA3
6119
Proximity Label-MS
Homo sapiens
203
RPS13
6207
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
204
UBA52
7311
Co-fractionation
Homo sapiens
205
RPS14
6208
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
206
RPL35A
6165
Co-fractionation
Homo sapiens
207
NHP2L1
4809
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
208
RPL27A
6157
Co-fractionation
Homo sapiens
209
RPL22
6146
Co-fractionation
Homo sapiens
210
AUH
549
Proximity Label-MS
Homo sapiens
211
MYCN
Affinity Capture-MS
Homo sapiens
212
DHFRL1
Proximity Label-MS
Homo sapiens
213
RPL18
6141
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
214
ADSS
159
Affinity Capture-MS
Homo sapiens
215
RNF2
Affinity Capture-MS
Homo sapiens
216
GALNT2
2590
Co-fractionation
Homo sapiens
217
Rpl35
66489
Affinity Capture-MS
Mus musculus
218
Eif3e
16341
Affinity Capture-MS
Mus musculus
219
TSR1
55720
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
220
BMP4
652
Affinity Capture-MS
Homo sapiens
221
PSMB1
5689
Co-fractionation
Homo sapiens
222
C9orf72
Affinity Capture-MS
Homo sapiens
223
ELF5
Two-hybrid
Homo sapiens
224
HUWE1
10075
Affinity Capture-MS
Homo sapiens
225
RPS16
6217
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
226
RPL19
6143
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
227
G3BP2
9908
Affinity Capture-MS
Homo sapiens
228
AHSA1
10598
Affinity Capture-MS
Homo sapiens
229
RPL13
6137
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
230
RPL37
6167
Co-fractionation
Homo sapiens
231
RPS27A
6233
Co-fractionation
Homo sapiens
232
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
233
FASN
2194
Positive Genetic
Homo sapiens
234
NEDD8
4738
Affinity Capture-MS
Homo sapiens
235
RPS25
6230
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
236
LAMTOR1
55004
Proximity Label-MS
Homo sapiens
237
ILF3
3609
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
238
CUL2
8453
Affinity Capture-MS
Homo sapiens
239
RPL6
6128
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
240
FOLR1
2348
Affinity Capture-MS
Homo sapiens
241
RPS21
6227
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
242
Cbx1
Affinity Capture-MS
Mus musculus
243
ZEB1
Affinity Capture-MS
Homo sapiens
244
ZNF746
Affinity Capture-MS
Homo sapiens
245
FOXP1
27086
Protein-RNA
Homo sapiens
246
CDC37
11140
Two-hybrid
Homo sapiens
247
CUL5
8065
Affinity Capture-MS
Homo sapiens
248
RPS12
6206
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
249
HNRNPM
4670
Co-fractionation
Homo sapiens
250
SMURF1
57154
Affinity Capture-MS
Homo sapiens
251
G3BP1
10146
Affinity Capture-MS
Homo sapiens
252
SRP72
6731
Affinity Capture-MS
Homo sapiens
253
CAPRIN1
4076
Affinity Capture-MS
Homo sapiens
254
CAPZB
832
Affinity Capture-MS
Homo sapiens
255
HSP90AA1
3320
Co-fractionation
Homo sapiens
256
HDGF
3068
Affinity Capture-MS
Homo sapiens
257
MRPL22
Co-fractionation
Homo sapiens
258
GNL1
2794
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
259
RPS5
6193
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
260
NIFK
84365
Co-fractionation
Homo sapiens
261
RPL34
6164
Co-fractionation
Homo sapiens
262
TOP2A
7153
Affinity Capture-MS
Homo sapiens
263
ESR1
Affinity Capture-MS
Homo sapiens
264
DRG1
4733
Affinity Capture-MS
Homo sapiens
265
UFL1
23376
Affinity Capture-MS
Homo sapiens
266
RPS20
6224
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
267
KIAA1429
25962
Affinity Capture-MS
Homo sapiens
268
LONP1
9361
Proximity Label-MS
Homo sapiens
269
RPL38
6169
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
270
RPS24
6229
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
271
MOV10
4343
Co-fractionation
Homo sapiens
272
BCL2L1
598
Affinity Capture-MS
Homo sapiens
273
EIF4B
1975
Affinity Capture-MS
Homo sapiens
274
CYLD
Affinity Capture-MS
Homo sapiens
275
RPL7A
6130
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
276
PINK1
Affinity Capture-MS
Homo sapiens
277
RBM8A
9939
Affinity Capture-MS
Homo sapiens
278
CUL4A
8451
Affinity Capture-MS
Homo sapiens
279
RPL8
6132
Co-fractionation
Homo sapiens
280
BYSL
705
Affinity Capture-MS
Homo sapiens
Co-crystal Structure
Homo sapiens
281
RPL28
6158
Co-fractionation
Homo sapiens
282
RPS27L
51065
Co-fractionation
Homo sapiens
283
RPL23A
6147
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
284
RPS29
6235
Co-fractionation
Homo sapiens
285
HNRNPU
3192
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
286
GNB2L1
10399
Affinity Capture-MS
Homo sapiens
287
FAM207A
Co-crystal Structure
Homo sapiens
288
SRP9
6726
Affinity Capture-MS
Homo sapiens
289
PSMD1
5707
Co-fractionation
Homo sapiens
290
ATXN3
4287
Affinity Capture-MS
Homo sapiens
291
DDX3X
1654
Co-fractionation
Homo sapiens
292
DDX58
23586
Affinity Capture-RNA
Homo sapiens
293
EXOSC1
51013
Affinity Capture-MS
Homo sapiens
294
DDRGK1
65992
Affinity Capture-MS
Homo sapiens
295
RPL17
6139
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
296
EIF5
1983
Affinity Capture-MS
Homo sapiens
297
PSMD3
5709
Co-fractionation
Homo sapiens
View the network
image/svg+xml
Pathways in which RPS15A is involved