Experiment description of studies that identified Sf3b1 in sEVs

1 Experiment ID 907 MISEV standards ✔ EM Biophysical techniques ✔ Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a Enriched markers ✔ HSPA5 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 37309723     Organism Mus musculus Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." Journal name Proteomics Publication year 2023 Sample Colon cancer cells Sample name C26 Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

2 Experiment ID 908 MISEV standards ✔ EM Biophysical techniques ✔ Tsg101|Sdcbp|Cd151|Gapdh|Lamp2|Cd81|Cd82|Cd9|Cd63|Cd80|Flot2|Tfrc|Rab35|Rab5a Enriched markers ✔ HSPA5 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 37309723     Organism Mus musculus Experiment description Proteomic analysis of the small extracellular vesicles and soluble secretory proteins from cachexia inducing and non-inducing cancer cells Authors "Chitti SV, Kang T, Fonseka P, Marzan AL, Stewart S, Shahi S, Bramich K, Ang CS, Pathan M, Gummadi S, Mathivanan S." Journal name Proteomics Publication year 2023 Sample T-cell lymphoma cells Sample name EL4 Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

Protein-protein interactions for Sf3b1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 Ddx5 13207 Co-fractionation Mus musculus 2 Hspd1 15510 Co-fractionation Mus musculus 3 Fancd2   Affinity Capture-MS Mus musculus 4 Mycbp2 105689 Affinity Capture-MS Mus musculus 5 Hspa8 15481 Co-fractionation Mus musculus 6 Snrpd1 20641 Co-fractionation Mus musculus 7 Srrm1 51796 Co-fractionation Mus musculus 8 Cdc5l 71702 Co-fractionation Mus musculus 9 Plrg1   Co-fractionation Mus musculus 10 Alyref   Co-fractionation Mus musculus 11 Cul3   Affinity Capture-MS Mus musculus 12 Ybx1 22608 Co-fractionation Mus musculus 13 Kctd13   Affinity Capture-MS Mus musculus 14 Hnrnpu 51810 Co-fractionation Mus musculus 15 Prpf19 28000 Co-fractionation Mus musculus 16 Rbm8a   Co-fractionation Mus musculus 17 Sf3b3 101943 Co-fractionation Mus musculus 18 Mettl21e   Affinity Capture-MS Mus musculus 19 Snrpe 20643 Co-fractionation Mus musculus 20 Pabpc1 18458 Co-fractionation Mus musculus 21 Srrm2   Co-fractionation Mus musculus 22 Puf60 67959 Co-fractionation Mus musculus 23 Unk   Affinity Capture-RNA Mus musculus 24 Syncrip 56403 Co-fractionation Mus musculus 25 Ppwd1   Co-fractionation Mus musculus 26 Sfpq 71514 Co-fractionation Mus musculus 27 Dhx15 13204 Co-fractionation Mus musculus 28 Hnrnpa2b1 53379 Co-fractionation Mus musculus 29 Hnrnpk 15387 Co-fractionation Mus musculus 30 Ddx42 72047 Co-fractionation Mus musculus 31 Eed   Affinity Capture-MS Mus musculus 32 U2af2 22185 Co-fractionation Mus musculus 33 Skiv2l2   Co-fractionation Mus musculus 34 Eftud2 20624 Co-fractionation Mus musculus 35 Ppie   Co-fractionation Mus musculus View the network

Pathways in which Sf3b1 is involved

No pathways found