Gene ontology annotations for PELO
Experiment description of studies that identified PELO in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for PELO
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
UBE2H
7328
Affinity Capture-MS
Homo sapiens
2
CLPP
8192
Proximity Label-MS
Homo sapiens
3
MCM7
4176
Affinity Capture-MS
Homo sapiens
4
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
5
FASN
2194
Positive Genetic
Homo sapiens
6
SPRTN
Affinity Capture-MS
Homo sapiens
7
PARP1
142
Proximity Label-MS
Homo sapiens
8
FLNA
2316
Two-hybrid
Homo sapiens
9
LRRC20
Cross-Linking-MS (XL-MS)
Homo sapiens
10
PAXIP1
Affinity Capture-MS
Homo sapiens
11
DYNLT1
6993
Two-hybrid
Homo sapiens
12
EGFR
1956
Affinity Capture-MS
Homo sapiens
Negative Genetic
Homo sapiens
13
TP53BP1
7158
Affinity Capture-MS
Homo sapiens
14
HSPA8
3312
Affinity Capture-MS
Homo sapiens
15
XPO1
7514
Affinity Capture-MS
Homo sapiens
16
ARRDC4
Affinity Capture-MS
Homo sapiens
17
AMBRA1
Affinity Capture-MS
Homo sapiens
18
ECT2
1894
Affinity Capture-MS
Homo sapiens
19
COPG2
26958
Cross-Linking-MS (XL-MS)
Homo sapiens
20
SMYD2
56950
Affinity Capture-MS
Homo sapiens
21
FAS
355
Proximity Label-MS
Homo sapiens
22
TIMM50
92609
Affinity Capture-MS
Homo sapiens
23
TRIM66
Affinity Capture-MS
Homo sapiens
24
NOP56
10528
Co-fractionation
Homo sapiens
25
ZKSCAN1
Affinity Capture-MS
Homo sapiens
26
CUL3
8452
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
TRIM33
51592
Affinity Capture-MS
Homo sapiens
28
LMO4
Two-hybrid
Homo sapiens
29
SLC25A1
6576
Affinity Capture-MS
Homo sapiens
30
HSPB1
3315
Two-hybrid
Homo sapiens
31
TRIM55
Two-hybrid
Homo sapiens
32
PARK2
Affinity Capture-MS
Homo sapiens
33
HIST1H4A
8359
Cross-Linking-MS (XL-MS)
Homo sapiens
34
DDX58
23586
Affinity Capture-RNA
Homo sapiens
35
RIPK4
Affinity Capture-MS
Homo sapiens
36
HACD3
51495
Affinity Capture-MS
Homo sapiens
37
HBS1L
10767
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
38
SEPT9
10801
Proximity Label-MS
Homo sapiens
39
PRMT6
Two-hybrid
Homo sapiens
40
SMARCA4
6597
Co-fractionation
Homo sapiens
41
PCBP1
5093
Affinity Capture-MS
Homo sapiens
42
RUVBL1
8607
Affinity Capture-MS
Homo sapiens
43
MYC
Affinity Capture-MS
Homo sapiens
44
C9orf72
Affinity Capture-MS
Homo sapiens
45
AIFM1
9131
Affinity Capture-MS
Homo sapiens
46
KRTAP12-2
Two-hybrid
Homo sapiens
47
C16orf72
29035
Affinity Capture-MS
Homo sapiens
48
YBX3
8531
Co-fractionation
Homo sapiens
49
CDK9
1025
Affinity Capture-MS
Homo sapiens
50
IFI16
3428
Affinity Capture-MS
Homo sapiens
51
DNAJB11
51726
Affinity Capture-MS
Homo sapiens
52
L3MBTL1
Affinity Capture-MS
Homo sapiens
53
BRD1
23774
Affinity Capture-MS
Homo sapiens
54
MEOX2
Two-hybrid
Homo sapiens
55
LDLR
3949
Positive Genetic
Homo sapiens
56
FBXL6
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
57
CAP1
10487
Cross-Linking-MS (XL-MS)
Homo sapiens
58
KRAS
3845
Negative Genetic
Homo sapiens
59
MDC1
Affinity Capture-MS
Homo sapiens
60
ITGA4
3676
Cross-Linking-MS (XL-MS)
Homo sapiens
61
ABCD3
5825
Affinity Capture-MS
Homo sapiens
62
POC1B
282809
Affinity Capture-MS
Homo sapiens
63
PKM
5315
Cross-Linking-MS (XL-MS)
Homo sapiens
64
SREBF2
6721
Positive Genetic
Homo sapiens
65
HEATR1
55127
Affinity Capture-MS
Homo sapiens
66
MYO1D
4642
Affinity Capture-MS
Homo sapiens
67
SLC25A12
8604
Affinity Capture-MS
Homo sapiens
68
HSP90B1
7184
Cross-Linking-MS (XL-MS)
Homo sapiens
69
Ksr1
Affinity Capture-MS
Mus musculus
70
HUWE1
10075
Affinity Capture-MS
Homo sapiens
71
FANCI
55215
Affinity Capture-MS
Homo sapiens
72
TRIM63
Two-hybrid
Homo sapiens
73
EP300
2033
Affinity Capture-MS
Homo sapiens
74
CDC5L
988
Affinity Capture-MS
Homo sapiens
75
HIF1A
3091
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which PELO is involved
No pathways found