Gene ontology annotations for HDGFRP3
Experiment description of studies that identified HDGFRP3 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
Protein-protein interactions for HDGFRP3
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
CDK17
5128
Affinity Capture-MS
Homo sapiens
2
BSCL2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
3
FAM161A
Affinity Capture-MS
Homo sapiens
4
RBM42
Affinity Capture-MS
Homo sapiens
5
PARP1
142
Affinity Capture-MS
Homo sapiens
6
GRB2
2885
Affinity Capture-MS
Homo sapiens
7
SLC30A6
55676
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
8
ZNF280A
Affinity Capture-MS
Homo sapiens
9
TMEM128
Affinity Capture-MS
Homo sapiens
10
BAZ2B
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
11
CDKL5
Affinity Capture-MS
Homo sapiens
12
TERF2IP
54386
Two-hybrid
Homo sapiens
13
CPXCR1
Affinity Capture-MS
Homo sapiens
14
BRD3
8019
Affinity Capture-MS
Homo sapiens
15
NOD2
64127
Affinity Capture-MS
Homo sapiens
16
SF3B2
10992
Affinity Capture-MS
Homo sapiens
17
VPS37A
137492
Affinity Capture-MS
Homo sapiens
18
GPANK1
Affinity Capture-MS
Homo sapiens
19
HDGFRP2
84717
Affinity Capture-MS
Homo sapiens
20
SENP8
Affinity Capture-MS
Homo sapiens
21
TRIM21
6737
Co-fractionation
Homo sapiens
22
ZNF23
Affinity Capture-MS
Homo sapiens
23
ZRANB3
Affinity Capture-MS
Homo sapiens
24
DPF3
Affinity Capture-MS
Homo sapiens
25
HSPA1A
3303
Cross-Linking-MS (XL-MS)
Homo sapiens
26
RNF13
11342
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
MTERF2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
28
ZIC2
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which HDGFRP3 is involved
No pathways found