Gene description for NOD2
Gene name nucleotide-binding oligomerization domain containing 2
Gene symbol NOD2
Other names/aliases ACUG
BLAU
CARD15
CD
CLR16.3
IBD1
NLRC2
NOD2B
PSORAS1
Species Homo sapiens
 Database cross references - NOD2
ExoCarta ExoCarta_64127
Entrez Gene 64127
HGNC 5331
MIM 605956
UniProt Q9HC29  
 NOD2 identified in exosomes derived from the following tissue/cell type
Hepatocytes 26054723    
 Gene ontology annotations for NOD2
Molecular Function
    CARD domain binding GO:0050700 IPI
    peptidoglycan binding GO:0042834 IDA
    protein kinase binding GO:0019901 IPI
    enzyme binding GO:0019899 IPI
    muramyl dipeptide binding GO:0032500 IDA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
Biological Process
    positive regulation of interleukin-1 beta production GO:0032731 IMP
    toll-like receptor TLR1:TLR2 signaling pathway GO:0038123 TAS
    maintenance of gastrointestinal epithelium GO:0030277 IMP
    nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway GO:0035872 TAS
    activation of MAPK activity GO:0000187 TAS
    positive regulation of ERK1 and ERK2 cascade GO:0070374 ISS
    toll-like receptor 4 signaling pathway GO:0034142 TAS
    negative regulation of interleukin-2 production GO:0032703 IEA
    negative regulation of interleukin-12 production GO:0032695 IEA
    detection of muramyl dipeptide GO:0032498 IDA
    MyD88-independent toll-like receptor signaling pathway GO:0002756 TAS
    toll-like receptor 10 signaling pathway GO:0034166 TAS
    positive regulation of epithelial cell proliferation GO:0050679 ISS
    TRIF-dependent toll-like receptor signaling pathway GO:0035666 TAS
    regulation of neutrophil chemotaxis GO:0090022 IEA
    response to lipopolysaccharide GO:0032496 IEA
    detection of biotic stimulus GO:0009595 TAS
    regulation of inflammatory response GO:0050727 IC
    positive regulation of type 2 immune response GO:0002830 IMP
    negative regulation of growth of symbiont in host GO:0044130 IEA
    negative regulation of T cell mediated immunity GO:0002710 IEA
    positive regulation of stress-activated MAPK cascade GO:0032874 IDA
    positive regulation of dendritic cell antigen processing and presentation GO:0002606 ISS
    innate immune response GO:0045087 TAS
    negative regulation of toll-like receptor 2 signaling pathway GO:0034136 IEA
    protein oligomerization GO:0051259 TAS
    positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria GO:0006965 IEA
    cellular response to organic cyclic compound GO:0071407 IEA
    positive regulation of I-kappaB kinase/NF-kappaB signaling GO:0043123 IDA
    negative regulation of interferon-gamma production GO:0032689 IEA
    nucleotide-binding oligomerization domain containing signaling pathway GO:0070423 TAS
    positive regulation of phosphatidylinositol 3-kinase activity GO:0043552 ISS
    immunoglobulin production involved in immunoglobulin mediated immune response GO:0002381 IEA
    negative regulation of NF-kappaB transcription factor activity GO:0032088 IEA
    positive regulation of nitric-oxide synthase biosynthetic process GO:0051770 ISS
    positive regulation of B cell activation GO:0050871 IDA
    positive regulation of interleukin-1 beta secretion GO:0050718 IDA
    positive regulation of NF-kappaB transcription factor activity GO:0051092 TAS
    toll-like receptor 5 signaling pathway GO:0034146 TAS
    positive regulation of interleukin-6 production GO:0032755 IDA
    positive regulation of interleukin-12 production GO:0032735 IEA
    defense response to bacterium GO:0042742 IDA
    positive regulation of humoral immune response mediated by circulating immunoglobulin GO:0002925 IEA
    activation of MAPK activity involved in innate immune response GO:0035419 ISS
    nucleotide-binding oligomerization domain containing 2 signaling pathway GO:0070431 IDA
    defense response GO:0006952 TAS
    cytokine production involved in immune response GO:0002367 IMP
    intracellular signal transduction GO:0035556 IDA
    positive regulation of tumor necrosis factor production GO:0032760 IMP
    stress-activated MAPK cascade GO:0051403 TAS
    positive regulation of transcription from RNA polymerase II promoter GO:0045944 IDA
    positive regulation of peptidyl-tyrosine phosphorylation GO:0050731 IEA
    positive regulation of phagocytosis GO:0050766 IEA
    positive regulation of Notch signaling pathway GO:0045747 ISS
    negative regulation of macrophage apoptotic process GO:2000110 ISS
    positive regulation of gamma-delta T cell activation GO:0046645 ISS
    defense response to Gram-positive bacterium GO:0050830 IEA
    positive regulation of prostaglandin-endoperoxide synthase activity GO:0060585 ISS
    response to nutrient GO:0007584 IEA
    positive regulation of interleukin-10 production GO:0032733 ISS
    macrophage inflammatory protein-1 alpha production GO:0071608 IEA
    response to muramyl dipeptide GO:0032495 IDA
    negative regulation of tumor necrosis factor production GO:0032720 IEA
    JNK cascade GO:0007254 TAS
    negative regulation of inflammatory response to antigenic stimulus GO:0002862 IEA
    positive regulation of cytokine production involved in inflammatory response GO:1900017 IDA
    toll-like receptor 2 signaling pathway GO:0034134 TAS
    MyD88-dependent toll-like receptor signaling pathway GO:0002755 TAS
    positive regulation of oxidoreductase activity GO:0051353 ISS
    toll-like receptor 9 signaling pathway GO:0034162 TAS
    negative regulation of interleukin-18 production GO:0032701 IEA
    toll-like receptor signaling pathway GO:0002224 TAS
    toll-like receptor TLR6:TLR2 signaling pathway GO:0038124 TAS
    innate immune response in mucosa GO:0002227 IEA
    positive regulation of JNK cascade GO:0046330 IDA
    positive regulation of dendritic cell cytokine production GO:0002732 IEA
    cellular response to muramyl dipeptide GO:0071225 IDA
    response to exogenous dsRNA GO:0043330 IEA
    cellular response to peptidoglycan GO:0071224 IEA
    detection of bacterium GO:0016045 IDA
    cytokine secretion involved in immune response GO:0002374 IMP
    positive regulation of prostaglandin-E synthase activity GO:2000363 ISS
    positive regulation of interleukin-17 production GO:0032740 IMP
    toll-like receptor 3 signaling pathway GO:0034138 TAS
Subcellular Localization
    cell surface GO:0009986 IDA
    basolateral plasma membrane GO:0016323 IEA
    cytoskeleton GO:0005856 IDA
    plasma membrane GO:0005886 IDA
    cytosol GO:0005829 TAS
    protein complex GO:0043234 IDA
    COP9 signalosome GO:0008180 IDA
    vesicle GO:0031982 IDA
    cytoplasm GO:0005737 TAS
 Experiment description of studies that identified NOD2 in exosomes
1
Experiment ID 237
ISEV standards
EM
EV Biophysical techniques
TSG101|Alix|HSC70|GAPDH
EV Cytosolic markers
EV Membrane markers
HSP90B1
EV Negative markers
qNano
EV Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for NOD2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 RIPK2  
Invivo Homo sapiens
2 CARD12  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
3 CASP1  
Affinity Capture-Western Homo sapiens
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