Gene description for HDAC8
Gene name histone deacetylase 8
Gene symbol HDAC8
Other names/aliases CDA07
CDLS5
HD8
HDACL1
MRXS6
RPD3
WTS
Species Homo sapiens
 Database cross references - HDAC8
ExoCarta ExoCarta_55869
Entrez Gene 55869
HGNC 13315
MIM 300269
UniProt Q9BY41  
 HDAC8 identified in exosomes derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for HDAC8
Molecular Function
    metal ion binding GO:0046872 IEA
    NAD-dependent histone deacetylase activity (H4-K16 specific) GO:0046970 IEA
    NAD-dependent histone deacetylase activity (H3-K14 specific) GO:0032041 IEA
    NAD-dependent histone deacetylase activity (H3-K9 specific) GO:0046969 IEA
    NAD-dependent histone deacetylase activity (H3-K18 specific) GO:0097372 IEA
    transcription factor binding GO:0008134 TAS
    histone deacetylase activity GO:0004407 TAS
Biological Process
    mitotic cell cycle GO:0000278 TAS
    chromatin modification GO:0016568 TAS
    histone H3-K9 deacetylation GO:1990619 IEA
    histone H3-K9 modification GO:0061647 IEA
    chromatin organization GO:0006325 TAS
    histone H4 deacetylation GO:0070933 IEA
    regulation of cohesin localization to chromatin GO:0071922 IMP
    chromatin assembly or disassembly GO:0006333 TAS
    sister chromatid cohesion GO:0007062 IMP
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 TAS
    transcription, DNA-templated GO:0006351 IEA
Subcellular Localization
    nucleoplasm GO:0005654 TAS
    cytosol GO:0005829 TAS
    nucleus GO:0005634 TAS
    nuclear chromosome GO:0000228 TAS
    histone deacetylase complex GO:0000118 TAS
    cytoplasm GO:0005737 TAS
    plasma membrane GO:0005886 IDA
 Experiment description of studies that identified HDAC8 in exosomes
1
Experiment ID 234
ISEV standards
EM
EV Biophysical techniques
TSG101|Alix|HSC70|GAPDH
EV Cytosolic markers
EV Membrane markers
HSP90B1
EV Negative markers
qNano
EV Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for HDAC8
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 RUNX1T1  
Affinity Capture-Western Homo sapiens
2 CBFA2T3  
Affinity Capture-Western Homo sapiens
3 MDC1  
Protein-peptide Homo sapiens
View the network image/svg+xml



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