Gene description for Sdhb
Gene name
succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
Gene symbol
Sdhb
Other names/aliases
0710008N11Rik
Species
Mus musculus
Database cross references - Sdhb
ExoCarta
ExoCarta_67680
Vesiclepedia
VP_67680
Entrez Gene
67680
UniProt
Q9CQA3
Sdhb identified in sEVs derived from the following tissue/cell type
Melanoma cells
34957415
Melanoma cells
34957415
Pancreatic cells
19351151
Gene ontology annotations for Sdhb
Experiment description of studies that identified Sdhb in sEVs
1
Experiment ID
1117
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
1118
MISEV standards
✘
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✔
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34957415
Organism
Mus musculus
Experiment description
Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors
"GarcÃa-Silva S, Benito-MartÃn A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÃ, Torres-Ruiz R, RodrÃguez-Perales S, MartÃnez L, Pérez-MartÃnez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, MartÃnez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, MegÃas D, Mehrara BJ, Lyden D, Peinado H."
Journal name
Nat Cancer
Publication year
2021
Sample
Melanoma cells
Sample name
B16-F1R2
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
3
Experiment ID
188
MISEV standards
✔
Biophysical techniques
✔
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19351151
Organism
Mus musculus
Experiment description
Characterization of vesicles secreted from insulinoma NIT-1 cells.
Authors
"Lee HS, Jeong J, Lee KJ."
Journal name
J Proteome Res
Publication year
2009
Sample
Pancreatic cells
Sample name
Pancreatic beta cell (NIT-1)
Isolation/purification methods
Differential centrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for Sdhb
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Got2
14719
Co-fractionation
Mus musculus
2
Pdha1
Co-fractionation
Mus musculus
3
Atp5j
Co-fractionation
Mus musculus
4
Ndufv3
Co-fractionation
Mus musculus
5
Ndufa6
Co-fractionation
Mus musculus
6
Ndufb5
Co-fractionation
Mus musculus
7
Coq9
Co-fractionation
Mus musculus
8
Cox6c
Co-fractionation
Mus musculus
9
Hadha
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
10
Slc25a4
11739
Co-fractionation
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
11
Cox5a
Co-fractionation
Mus musculus
12
Ndufa9
66108
Cross-Linking-MS (XL-MS)
Mus musculus
13
Ogdh
18293
Co-fractionation
Mus musculus
14
Cycs
13063
Co-fractionation
Mus musculus
15
Kcnma1
Affinity Capture-MS
Mus musculus
16
Atp5e
Co-fractionation
Mus musculus
17
Ndufa12
Co-fractionation
Mus musculus
18
Atxn1
Affinity Capture-MS
Mus musculus
19
Ndufc2
Co-fractionation
Mus musculus
20
Uqcrc1
Co-fractionation
Mus musculus
21
Cox6b1
Co-fractionation
Mus musculus
22
Aco2
11429
Co-fractionation
Mus musculus
23
HSD17B10
3028
Affinity Capture-MS
Homo sapiens
24
Atp5l
Co-fractionation
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
25
Sucla2
Co-fractionation
Mus musculus
26
Atp5b
11947
Co-fractionation
Mus musculus
27
Ndufs2
Co-fractionation
Mus musculus
28
Dlst
Co-fractionation
Mus musculus
29
Atp5k
Co-fractionation
Mus musculus
30
Ndufs5
Co-fractionation
Mus musculus
31
Ndufs1
Co-fractionation
Mus musculus
32
Atp5j2
Co-fractionation
Mus musculus
33
Atp5a1
11946
Co-fractionation
Mus musculus
34
Cox7a1
Cross-Linking-MS (XL-MS)
Mus musculus
35
Fh1
14194
Co-fractionation
Mus musculus
36
Sdha
66945
Co-fractionation
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
37
Slc25a5
11740
Co-fractionation
Mus musculus
38
Suclg1
Co-fractionation
Mus musculus
39
Cartpt
Two-hybrid
Mus musculus
40
Chchd3
Co-fractionation
Mus musculus
41
Uqcr10
Co-fractionation
Mus musculus
42
Ndufa4
Co-fractionation
Mus musculus
43
Sdhb
67680
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
Cross-Linking-MS (XL-MS)
Mus musculus
44
Ndufa10
Co-fractionation
Mus musculus
45
Uqcrc2
67003
Co-fractionation
Mus musculus
46
Dld
13382
Co-fractionation
Mus musculus
47
Ndufb6
Co-fractionation
Mus musculus
48
Idh3g
Co-fractionation
Mus musculus
49
Atp5c1
Co-fractionation
Mus musculus
50
Fancd2
Affinity Capture-MS
Mus musculus
51
Mdh2
17448
Co-fractionation
Mus musculus
52
Uqcrfs1
66694
Co-fractionation
Mus musculus
53
Dlat
Co-fractionation
Mus musculus
View the network
image/svg+xml
Pathways in which Sdhb is involved