Gene ontology annotations for CLIC3
Experiment description of studies that identified CLIC3 in exosomes
1
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
3
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
4
Experiment ID
63
MISEV standards
✘
Biophysical techniques
✔
AQP2
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19056867
Organism
Homo sapiens
Experiment description
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Authors
"Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA"
Journal name
JASN
Publication year
2009
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LTQ] Western blotting
Protein-protein interactions for CLIC3
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
APP
351
Reconstituted Complex
Homo sapiens
2
KRT85
Two-hybrid
Homo sapiens
3
ALX1
Two-hybrid
Homo sapiens
4
TBC1D3
Two-hybrid
Homo sapiens
5
KATNBL1
Two-hybrid
Homo sapiens
6
EFHC2
Two-hybrid
Homo sapiens
7
C18orf21
Affinity Capture-MS
Homo sapiens
8
C9orf24
Two-hybrid
Homo sapiens
9
C11orf84
Affinity Capture-MS
Homo sapiens
10
POT1
Two-hybrid
Homo sapiens
11
SCML4
Two-hybrid
Homo sapiens
12
AGPAT1
10554
Affinity Capture-MS
Homo sapiens
13
DDAH1
23576
Co-fractionation
Homo sapiens
14
ANKRD55
Two-hybrid
Homo sapiens
15
PAN3
255967
Affinity Capture-MS
Homo sapiens
16
AES
166
Two-hybrid
Homo sapiens
17
CNOT4
4850
Affinity Capture-MS
Homo sapiens
18
INCA1
Two-hybrid
Homo sapiens
19
PCDH12
51294
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
20
FKBP5
2289
Affinity Capture-MS
Homo sapiens
21
SEPHS2
Co-fractionation
Homo sapiens
22
MIA2
Affinity Capture-MS
Homo sapiens
23
RFX1
Affinity Capture-MS
Homo sapiens
24
DDIT4L
Two-hybrid
Homo sapiens
25
MSX2
Two-hybrid
Homo sapiens
26
UBE2R2
54926
Affinity Capture-MS
Homo sapiens
27
FNDC5
Affinity Capture-MS
Homo sapiens
28
STMN3
Two-hybrid
Homo sapiens
29
GDI2
2665
Co-fractionation
Homo sapiens
30
ESR1
Affinity Capture-MS
Homo sapiens
31
C7orf31
Two-hybrid
Homo sapiens
32
HADH
3033
Co-fractionation
Homo sapiens
33
PAN2
Affinity Capture-MS
Homo sapiens
34
MBNL1
4154
Affinity Capture-MS
Homo sapiens
35
SSUH2
Affinity Capture-MS
Homo sapiens
36
ZNF620
Two-hybrid
Homo sapiens
37
TAGLN2
8407
Co-fractionation
Homo sapiens
38
TBC1D3K
Two-hybrid
Homo sapiens
39
SARAF
Affinity Capture-MS
Homo sapiens
40
C11orf53
Affinity Capture-MS
Homo sapiens
41
FAM166B
Two-hybrid
Homo sapiens
42
GOT1
2805
Affinity Capture-MS
Homo sapiens
43
TBC1D3C
Two-hybrid
Homo sapiens
44
MIA3
375056
Two-hybrid
Homo sapiens
45
GLYR1
84656
Two-hybrid
Homo sapiens
46
AGR2
10551
Two-hybrid
Homo sapiens
47
LELP1
Two-hybrid
Homo sapiens
48
MBD3L1
Two-hybrid
Homo sapiens
49
KRTAP13-3
Two-hybrid
Homo sapiens
50
ZBTB42
Two-hybrid
Homo sapiens
51
ANKRD23
200539
Two-hybrid
Homo sapiens
52
ZC2HC1C
Two-hybrid
Homo sapiens
53
CCR1
Affinity Capture-MS
Homo sapiens
54
ENTHD2
Two-hybrid
Homo sapiens
55
MAPK15
Affinity Capture-Western
Homo sapiens
56
AGBL3
340351
Affinity Capture-MS
Homo sapiens
57
STX17
55014
Affinity Capture-MS
Homo sapiens
58
IL1A
Affinity Capture-MS
Homo sapiens
59
VPS4A
27183
Two-hybrid
Homo sapiens
60
PROSER2
254427
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which CLIC3 is involved
No pathways found