Gene description for NIPSNAP3B
Gene name nipsnap homolog 3B (C. elegans)
Gene symbol NIPSNAP3B
Other names/aliases FP944
NIPSNAP3
SNAP1
Species Homo sapiens
 Database cross references - NIPSNAP3B
ExoCarta ExoCarta_55335
Vesiclepedia VP_55335
Entrez Gene 55335
HGNC 23641
MIM 608872
UniProt Q9BS92  
 NIPSNAP3B identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
 Gene ontology annotations for NIPSNAP3B
Biological Process
    mitophagy GO:0000423 IEA
Subcellular Localization
    mitochondrion GO:0005739 HTP
    mitochondrion GO:0005739 IBA
 Experiment description of studies that identified NIPSNAP3B in exosomes
1
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for NIPSNAP3B
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 CYP24A1  
Affinity Capture-MS Homo sapiens
2 NIPSNAP3A  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
3 PDK3 5165
Affinity Capture-MS Homo sapiens
4 GLS 2744
Affinity Capture-MS Homo sapiens
5 TMLHE 55217
Affinity Capture-MS Homo sapiens
6 ALDH7A1 501
Co-fractionation Homo sapiens
7 DBT 1629
Affinity Capture-MS Homo sapiens
8 HSPD1 3329
Affinity Capture-MS Homo sapiens
9 C14orf159 80017
Affinity Capture-MS Homo sapiens
10 PRPS1L1 221823
Affinity Capture-MS Homo sapiens
11 PDK1 5163
Affinity Capture-MS Homo sapiens
12 CLUH 23277
Affinity Capture-MS Homo sapiens
13 ACSF2 80221
Affinity Capture-MS Homo sapiens
14 CPS1 1373
Affinity Capture-MS Homo sapiens
15 PDK2 5164
Affinity Capture-MS Homo sapiens
16 MTIF2 4528
Affinity Capture-MS Homo sapiens
17 BCKDHA 593
Affinity Capture-MS Homo sapiens
18 LACTB 114294
Affinity Capture-MS Homo sapiens
19 MCCC1 56922
Affinity Capture-MS Homo sapiens
20 TARS2 80222
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which NIPSNAP3B is involved
No pathways found





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