Gene ontology annotations for B4GALT5
Experiment description of studies that identified B4GALT5 in exosomes
1
Experiment ID
494
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD151|CD63|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
Osteoarthritic cartilage
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
496
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|SDCBP|TFRC|TSG101
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
Healthy cartilage
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
497
MISEV standards
✘
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
498
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35931686
Organism
Homo sapiens
Experiment description
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression
Authors
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD."
Journal name
Cell Death Dis
Publication year
2022
Sample
Chondrocytes
Sample name
T/C-28a2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
235
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule
mRNA
Identification method
RNA Sequencing
PubMed ID
26054723
Organism
Homo sapiens
Experiment description
Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors
"He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name
Carcinogenesis
Publication year
2015
Sample
Hepatocellular carcinoma cells
Sample name
HKCI-8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.19 g/mL
Molecules identified in the study
Protein RNA
Methods used in the study
Western blotting Mass spectrometry RT-PCR RNA Sequencing
6
Experiment ID
211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
IGROV1
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
7
Experiment ID
212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
OVCAR-3
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
8
Experiment ID
191
MISEV standards
✘
Biophysical techniques
✔
Alix|CD81|CD9
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20124223
Organism
Homo sapiens
Experiment description
Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors
"Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name
Mol Cell Proteomics
Publication year
2010
Sample
Squamous carcinoma cells
Sample name
Squamous carcinoma cell (A431)
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for B4GALT5
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
HNRNPH1
3187
Affinity Capture-RNA
Homo sapiens
2
CCL3
Affinity Capture-MS
Homo sapiens
3
CSTL1
Affinity Capture-MS
Homo sapiens
4
HS3ST1
Affinity Capture-MS
Homo sapiens
5
IL13RA2
3598
Affinity Capture-MS
Homo sapiens
6
TMEM59
9528
Affinity Capture-MS
Homo sapiens
7
PCDH20
Affinity Capture-MS
Homo sapiens
8
LIPH
200879
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
9
VTI1A
143187
Affinity Capture-MS
Homo sapiens
10
ATG9A
79065
Affinity Capture-MS
Homo sapiens
11
TNF
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
NRSN1
Affinity Capture-MS
Homo sapiens
13
FCGRT
2217
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
14
IL20RB
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
15
CHST8
64377
Affinity Capture-MS
Homo sapiens
16
PMCH
Affinity Capture-MS
Homo sapiens
17
HSPA13
6782
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
18
NAPA
8775
Affinity Capture-MS
Homo sapiens
19
IFNE
Affinity Capture-MS
Homo sapiens
20
ERP27
Affinity Capture-MS
Homo sapiens
21
ELAVL1
1994
Affinity Capture-RNA
Homo sapiens
22
TMX1
81542
Affinity Capture-MS
Homo sapiens
23
MGAT4C
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
GPR114
Affinity Capture-MS
Homo sapiens
25
OMA1
Affinity Capture-MS
Homo sapiens
26
PGLYRP3
114771
Affinity Capture-MS
Homo sapiens
27
C16orf92
Affinity Capture-MS
Homo sapiens
28
IL27RA
9466
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
29
SLC39A9
55334
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
30
KIAA1467
57613
Affinity Capture-MS
Homo sapiens
31
EDDM3A
Affinity Capture-MS
Homo sapiens
32
GABRG2
Affinity Capture-MS
Homo sapiens
33
B4GALT6
Affinity Capture-MS
Homo sapiens
34
HLA-DQA1
3117
Affinity Capture-MS
Homo sapiens
35
OPTC
Affinity Capture-MS
Homo sapiens
36
IDS
Affinity Capture-MS
Homo sapiens
37
AVP
Affinity Capture-MS
Homo sapiens
38
B3GNT7
Affinity Capture-MS
Homo sapiens
39
CTLA4
Affinity Capture-MS
Homo sapiens
40
NXPH2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
ADIPOQ
9370
Affinity Capture-MS
Homo sapiens
42
CRP
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
43
IGF2R
3482
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
44
GINM1
116254
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
45
EPO
2056
Affinity Capture-MS
Homo sapiens
46
KERA
Affinity Capture-MS
Homo sapiens
47
TPCN2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
48
CSF2
1437
Affinity Capture-MS
Homo sapiens
49
SYT12
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
50
HLA-DPA1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
51
CORT
Affinity Capture-MS
Homo sapiens
52
TMPRSS13
Affinity Capture-MS
Homo sapiens
View the network
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Pathways in which B4GALT5 is involved