Experiment description of studies that identified TATDN1 in exosomes

1 Experiment ID 363 MISEV standards ✘ Biophysical techniques ✔ TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1 Enriched markers ✔ DCLK1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 33991177     Organism Homo sapiens Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M." Journal name Proteomics Publication year 2021 Sample Gastric cancer cells Sample name MKN1 - 100K pellet Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

2 Experiment ID 364 MISEV standards ✘ Biophysical techniques ✔ TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1 Enriched markers ✔ DCLK1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 33991177     Organism Homo sapiens Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M." Journal name Proteomics Publication year 2021 Sample Gastric cancer cells Sample name MKN1 - 100K pellet Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

3 Experiment ID 365 MISEV standards ✘ Biophysical techniques ✔ TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1 Enriched markers ✔ DCLK1 Negative markers ✔ NTA Particle analysis Identified molecule Protein Identification method Mass spectrometry PubMed ID 33991177     Organism Homo sapiens Experiment description Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells Authors "Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M." Journal name Proteomics Publication year 2021 Sample Gastric cancer cells Sample name MKN1 - 100K pellet Isolation/purification methods Differential centrifugation Ultracentrifugation Flotation density - Molecules identified in the study Protein Methods used in the study Western blotting Mass spectrometry

Protein-protein interactions for TATDN1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 HNRNPH1 3187 Affinity Capture-RNA Homo sapiens 2 PAFAH1B1 5048 Co-fractionation Homo sapiens 3 UBE2I 7329 Co-fractionation Homo sapiens 4 NSFL1C 55968 Co-fractionation Homo sapiens 5 XAF1   Affinity Capture-MS Homo sapiens 6 HSD17B6   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 7 HSPB2   Two-hybrid Homo sapiens 8 CCT3 7203 Affinity Capture-MS Homo sapiens 9 PDCL3 79031 Affinity Capture-MS Homo sapiens 10 GMDS 2762 Co-fractionation Homo sapiens 11 PTMA 5757 Co-fractionation Homo sapiens 12 CCT2 10576 Affinity Capture-MS Homo sapiens 13 PDIA4 9601 Co-fractionation Homo sapiens 14 TAZ   Affinity Capture-MS Homo sapiens 15 LONP1 9361 Co-fractionation Homo sapiens 16 ARFGAP2 84364 Co-fractionation Homo sapiens 17 ALDH1B1 219 Co-fractionation Homo sapiens 18 CMPK1 51727 Co-fractionation Homo sapiens 19 TSG101 7251 Co-fractionation Homo sapiens 20 PPP5C 5536 Co-fractionation Homo sapiens 21 UBR7   Co-fractionation Homo sapiens 22 YARS 8565 Co-fractionation Homo sapiens 23 SH3PXD2B 285590 Co-fractionation Homo sapiens 24 KIAA0368 23392 Co-fractionation Homo sapiens 25 HIP1R 9026 Co-fractionation Homo sapiens 26 CCT7 10574 Affinity Capture-MS Homo sapiens 27 CCT5 22948 Affinity Capture-MS Homo sapiens 28 PAFAH1B2 5049 Co-fractionation Homo sapiens 29 PDCD10 11235 Co-fractionation Homo sapiens 30 USP8 9101 Co-fractionation Homo sapiens 31 HSP90AA4P 3323 Co-fractionation Homo sapiens 32 PPP1R2 5504 Co-fractionation Homo sapiens 33 PSPC1 55269 Co-fractionation Homo sapiens 34 TRMU   Affinity Capture-MS Homo sapiens 35 IL12RB1   Affinity Capture-MS Homo sapiens 36 RAP1GDS1 5910 Co-fractionation Homo sapiens 37 PAPSS1 9061 Co-fractionation Homo sapiens 38 IRF2BP1 26145 Co-fractionation Homo sapiens 39 FBXO17 115290 Affinity Capture-MS Homo sapiens 40 FH 2271 Co-fractionation Homo sapiens 41 CFB 629 Co-fractionation Homo sapiens 42 HEXB 3074 Co-fractionation Homo sapiens 43 PDSS1   Affinity Capture-MS Homo sapiens 44 MSN 4478 Co-fractionation Homo sapiens 45 WARS 7453 Co-fractionation Homo sapiens 46 PROSC 11212 Co-fractionation Homo sapiens 47 PIGR 5284 Affinity Capture-MS Homo sapiens 48 ATIC 471 Co-fractionation Homo sapiens 49 NAE1 8883 Co-fractionation Homo sapiens 50 CAPN2 824 Co-fractionation Homo sapiens 51 GART 2618 Co-fractionation Homo sapiens View the network

Pathways in which TATDN1 is involved

No pathways found