Gene ontology annotations for PAPSS1
Experiment description of studies that identified PAPSS1 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
IGROV1
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
10
Experiment ID
212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
OVCAR-3
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
11
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for PAPSS1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Ppp2r1a
51792
Affinity Capture-MS
Mus musculus
2
PAFAH1B1
5048
Co-fractionation
Homo sapiens
3
ARHGAP17
55114
Co-fractionation
Homo sapiens
4
DHX15
1665
Co-fractionation
Homo sapiens
5
NAPRT
93100
Co-fractionation
Homo sapiens
6
GLS
2744
Co-fractionation
Homo sapiens
7
CTPS1
1503
Co-fractionation
Homo sapiens
8
TFCP2
7024
Affinity Capture-MS
Homo sapiens
9
FASN
2194
Negative Genetic
Homo sapiens
10
Tyw3
Affinity Capture-MS
Mus musculus
11
NCK1
4690
Affinity Capture-MS
Homo sapiens
12
FANCG
2189
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
13
AHCY
191
Co-fractionation
Homo sapiens
14
GPX7
2882
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
15
KPNA1
3836
Affinity Capture-MS
Homo sapiens
16
FAM24B
Affinity Capture-MS
Homo sapiens
17
NSFL1C
55968
Co-fractionation
Homo sapiens
18
HMGB3
3149
Co-fractionation
Homo sapiens
19
CCDC116
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
20
PTMA
5757
Co-fractionation
Homo sapiens
21
ASNS
440
Co-fractionation
Homo sapiens
22
PSME2
5721
Co-fractionation
Homo sapiens
23
DYNC1I2
1781
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
MTRR
Co-fractionation
Homo sapiens
25
FERMT2
10979
Co-fractionation
Homo sapiens
26
Papss1
Affinity Capture-MS
Mus musculus
27
ACAT2
39
Co-fractionation
Homo sapiens
28
NAE1
8883
Co-fractionation
Homo sapiens
29
IDE
3416
Co-fractionation
Homo sapiens
30
PPP5C
5536
Co-fractionation
Homo sapiens
31
TUBB3
10381
Co-fractionation
Homo sapiens
32
C4orf26
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
33
FANCI
55215
Affinity Capture-MS
Homo sapiens
34
RNASEH2A
10535
Affinity Capture-MS
Homo sapiens
35
FBLIM1
54751
Affinity Capture-MS
Homo sapiens
36
SREBF2
6721
Negative Genetic
Homo sapiens
37
GNL1
2794
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
38
FAM195A
Affinity Capture-MS
Homo sapiens
39
PPP1R16A
84988
Two-hybrid
Homo sapiens
40
PRPS2
5634
Affinity Capture-MS
Homo sapiens
41
TRIM29
23650
Co-fractionation
Homo sapiens
42
FGB
2244
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
43
MAPKAPK3
7867
Co-fractionation
Homo sapiens
44
CAPZB
832
Co-fractionation
Homo sapiens
45
GALNT3
2591
Affinity Capture-MS
Homo sapiens
46
PARK2
Affinity Capture-MS
Homo sapiens
47
FBXW7
Affinity Capture-MS
Homo sapiens
48
ALKBH5
54890
Co-fractionation
Homo sapiens
49
TMEM132A
54972
Affinity Capture-MS
Homo sapiens
50
RPA3
6119
Proximity Label-MS
Homo sapiens
51
ERRFI1
54206
Two-hybrid
Homo sapiens
52
NTRK1
4914
Affinity Capture-MS
Homo sapiens
53
Rhoa
11848
Affinity Capture-MS
Mus musculus
54
RPL35A
6165
Affinity Capture-MS
Homo sapiens
55
TBC1D13
54662
Co-fractionation
Homo sapiens
56
XPOT
11260
Co-fractionation
Homo sapiens
57
FH
2271
Co-fractionation
Homo sapiens
58
UNC119
9094
Two-hybrid
Homo sapiens
59
PARP1
142
Affinity Capture-MS
Homo sapiens
60
SNRNP27
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
61
UBA3
9039
Co-fractionation
Homo sapiens
62
MSN
4478
Co-fractionation
Homo sapiens
63
ASMTL
8623
Affinity Capture-MS
Homo sapiens
64
YAF2
Affinity Capture-MS
Homo sapiens
65
CNDP2
55748
Co-fractionation
Homo sapiens
66
SMOC1
64093
Affinity Capture-MS
Homo sapiens
67
C2orf44
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
68
PAPSS2
9060
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Cross-Linking-MS (XL-MS)
Homo sapiens
69
ATIC
471
Co-fractionation
Homo sapiens
70
TATDN1
83940
Co-fractionation
Homo sapiens
71
CAPN2
824
Co-fractionation
Homo sapiens
72
EEF1A1
1915
Two-hybrid
Homo sapiens
View the network
image/svg+xml
Pathways in which PAPSS1 is involved