Gene description for SREBF2
Gene name sterol regulatory element binding transcription factor 2
Gene symbol SREBF2
Other names/aliases SREBP-2
SREBP2
bHLHd2
Species Homo sapiens
 Database cross references - SREBF2
ExoCarta ExoCarta_6721
Vesiclepedia VP_6721
Entrez Gene 6721
HGNC 11290
MIM 600481
UniProt Q12772  
 SREBF2 identified in exosomes derived from the following tissue/cell type
Hepatocytes 26054723    
 Gene ontology annotations for SREBF2
Molecular Function
    C-8 sterol isomerase activity GO:0000247 IDA
    RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IBA
    RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000978 IDA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IBA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IDA
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 IMP
    DNA-binding transcription factor activity, RNA polymerase II-specific GO:0000981 ISA
    DNA-binding transcription repressor activity, RNA polymerase II-specific GO:0001227 IDA
    protein binding GO:0005515 IPI
    protein dimerization activity GO:0046983 IEA
    E-box binding GO:0070888 IDA
    sequence-specific double-stranded DNA binding GO:1990837 IDA
Biological Process
    negative regulation of transcription by RNA polymerase II GO:0000122 IDA
    regulation of transcription by RNA polymerase II GO:0006357 IDA
    lipid metabolic process GO:0006629 TAS
    cholesterol metabolic process GO:0008203 IEA
    regulation of Notch signaling pathway GO:0008593 ISS
    cellular response to starvation GO:0009267 IMP
    positive regulation of cholesterol storage GO:0010886 IBA
    positive regulation of cholesterol storage GO:0010886 IDA
    SREBP signaling pathway GO:0032933 IDA
    SREBP signaling pathway GO:0032933 IMP
    cholesterol homeostasis GO:0042632 IEA
    positive regulation of cholesterol biosynthetic process GO:0045542 IDA
    positive regulation of cholesterol biosynthetic process GO:0045542 IMP
    positive regulation of transcription by RNA polymerase II GO:0045944 IBA
    positive regulation of transcription by RNA polymerase II GO:0045944 IDA
    positive regulation of transcription by RNA polymerase II GO:0045944 IDA
    cellular response to low-density lipoprotein particle stimulus GO:0071404 IEP
    cellular response to laminar fluid shear stress GO:0071499 NAS
    negative regulation of cholesterol efflux GO:0090370 IDA
    regulation of mitophagy GO:1901524 HMP
    positive regulation of miRNA transcription GO:1902895 IEA
    positive regulation of protein targeting to mitochondrion GO:1903955 HMP
Subcellular Localization
    Golgi membrane GO:0000139 TAS
    chromatin GO:0000785 ISA
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IDA
    nucleus GO:0005634 IMP
    nucleoplasm GO:0005654 IDA
    nucleoplasm GO:0005654 TAS
    cytoplasm GO:0005737 IDA
    endoplasmic reticulum GO:0005783 IDA
    endoplasmic reticulum membrane GO:0005789 TAS
    cytosol GO:0005829 TAS
    ER to Golgi transport vesicle membrane GO:0012507 IEA
    SREBP-SCAP-Insig complex GO:0032937 IDA
    intracellular membrane-bounded organelle GO:0043231 IDA
 Experiment description of studies that identified SREBF2 in exosomes
1
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
 Protein-protein interactions for SREBF2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ATAD1 84896
Positive Genetic Homo sapiens
2 ZNF37A 7587
Negative Genetic Homo sapiens
3 INSIG1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
4 SLC39A12  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 Scap  
Affinity Capture-Western Mus musculus
6 SLC25A39 51629
Negative Genetic Homo sapiens
7 UBE2H 7328
Negative Genetic Homo sapiens
8 ARMC5 79798
Negative Genetic Homo sapiens
9 PRDX5 25824
Negative Genetic Homo sapiens
10 EIF2AK4 440275
Negative Genetic Homo sapiens
11 AGPAT5 55326
Negative Genetic Homo sapiens
12 SERPINB4 6318
Positive Genetic Homo sapiens
13 LGR4 55366
Affinity Capture-MS Homo sapiens
14 ABHD17C 58489
Positive Genetic Homo sapiens
15 CCT5 22948
Negative Genetic Homo sapiens
16 EGR1  
Two-hybrid Homo sapiens
17 CD3D 915
Affinity Capture-MS Homo sapiens
18 SACM1L 22908
Affinity Capture-Western Homo sapiens
19 TRRAP 8295
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
20 SMURF1 57154
Negative Genetic Homo sapiens
21 SLC39A4 55630
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
22 HCST  
Affinity Capture-MS Homo sapiens
23 MCM9 254394
Positive Genetic Homo sapiens
24 IL13RA1  
Positive Genetic Homo sapiens
25 SP1  
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
26 CYP26B1  
Affinity Capture-MS Homo sapiens
27 KPNB1 3837
Reconstituted Complex Homo sapiens
28 SUB1 10923
Negative Genetic Homo sapiens
29 VPS52 6293
Negative Genetic Homo sapiens
30 KIAA0020 9933
Positive Genetic Homo sapiens
31 IGHM 3507
Affinity Capture-MS Homo sapiens
32 ECEL1  
Positive Genetic Homo sapiens
33 HK2 3099
Negative Genetic Homo sapiens
34 TMEM9B 56674
Affinity Capture-MS Homo sapiens
35 SLC25A1 6576
Negative Genetic Homo sapiens
36 CREM  
Negative Genetic Homo sapiens
37 XRN1 54464
Positive Genetic Homo sapiens
38 FGF3  
Negative Genetic Homo sapiens
39 MBTPS2  
Negative Genetic Homo sapiens
40 PARK7 11315
Affinity Capture-Western Homo sapiens
41 FAXC  
Affinity Capture-MS Homo sapiens
42 TNPO1 3842
Positive Genetic Homo sapiens
43 MTRF1  
Negative Genetic Homo sapiens
44 KDM2A  
Negative Genetic Homo sapiens
45 SC5D 6309
Positive Genetic Homo sapiens
46 APEX1 328
Affinity Capture-RNA Homo sapiens
47 TCEB3 6924
Negative Genetic Homo sapiens
48 EXOC3L2  
Positive Genetic Homo sapiens
49 MS4A15  
Affinity Capture-MS Homo sapiens
50 HDAC3 8841
Affinity Capture-Western Homo sapiens
Negative Genetic Homo sapiens
51 FIS1 51024
Positive Genetic Homo sapiens
52 MEAF6  
Negative Genetic Homo sapiens
53 TBCB 1155
Negative Genetic Homo sapiens
54 TBC1D20  
Negative Genetic Homo sapiens
55 ABLIM1 3983
Two-hybrid Homo sapiens
56 CASP3 836
Biochemical Activity Homo sapiens
57 H1FX 8971
Negative Genetic Homo sapiens
58 RD3  
Negative Genetic Homo sapiens
59 EMC4 51234
Negative Genetic Homo sapiens
60 ABCC3 8714
Negative Genetic Homo sapiens
61 CYP19A1  
Affinity Capture-MS Homo sapiens
62 COPS5 10987
Two-hybrid Homo sapiens
63 FBXW7  
Positive Genetic Homo sapiens
64 CLDN23  
Positive Genetic Homo sapiens
65 GDI1 2664
Positive Genetic Homo sapiens
66 TMEM151B  
Positive Genetic Homo sapiens
67 ZFAT  
Negative Genetic Homo sapiens
68 OS9 10956
Two-hybrid Homo sapiens
69 PSMC6 5706
Negative Genetic Homo sapiens
70 FTSJ2 29960
Negative Genetic Homo sapiens
71 RER1 11079
Positive Genetic Homo sapiens
72 TINF2  
Positive Genetic Homo sapiens
73 PIGH  
Affinity Capture-MS Homo sapiens
74 HAUS6  
Negative Genetic Homo sapiens
75 SYS1  
Negative Genetic Homo sapiens
76 C3orf52  
Affinity Capture-MS Homo sapiens
77 HINFP  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
78 EPC2  
Negative Genetic Homo sapiens
79 ABHD14A  
Negative Genetic Homo sapiens
80 FBXO5  
Negative Genetic Homo sapiens
81 CEP135  
Positive Genetic Homo sapiens
82 PCM1 5108
Positive Genetic Homo sapiens
83 TPPP3 51673
Positive Genetic Homo sapiens
84 IL17RA 23765
Affinity Capture-MS Homo sapiens
85 VPS16 64601
Negative Genetic Homo sapiens
86 ARL1 400
Negative Genetic Homo sapiens
87 GJC2  
Negative Genetic Homo sapiens
88 TMEM106A  
Negative Genetic Homo sapiens
89 USP7 7874
Negative Genetic Homo sapiens
90 SLC7A11 23657
Positive Genetic Homo sapiens
91 PTH1R  
Affinity Capture-MS Homo sapiens
92 TMEM59 9528
Affinity Capture-MS Homo sapiens
93 PES1 23481
Positive Genetic Homo sapiens
94 SUV420H1  
Negative Genetic Homo sapiens
95 MTNR1B  
Two-hybrid Homo sapiens
96 TNFRSF17  
Positive Genetic Homo sapiens
97 MAPK1 5594
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
98 HEXIM1 10614
Negative Genetic Homo sapiens
99 KCNG4  
Affinity Capture-MS Homo sapiens
100 AURKA 6790
Reconstituted Complex Homo sapiens
101 ZDHHC17 23390
Two-hybrid Homo sapiens
102 INPP4A 3631
Negative Genetic Homo sapiens
103 FAM96A  
Affinity Capture-MS Homo sapiens
104 TFAP2C 7022
Positive Genetic Homo sapiens
105 JMJD6 23210
Positive Genetic Homo sapiens
106 NAE1 8883
Two-hybrid Homo sapiens
107 ATF7IP 55729
Two-hybrid Homo sapiens
108 MAPK3 5595
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
109 TPR 7175
Negative Genetic Homo sapiens
110 MARCH7  
Negative Genetic Homo sapiens
111 FHL3 2275
Two-hybrid Homo sapiens
112 PSMD4 5710
Two-hybrid Homo sapiens
113 PELO 53918
Positive Genetic Homo sapiens
114 FOXK1 221937
Positive Genetic Homo sapiens
115 PTCHD1  
Positive Genetic Homo sapiens
116 EMC6 83460
Negative Genetic Homo sapiens
117 SCAP  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
118 SLC4A4 8671
Two-hybrid Homo sapiens
119 OSBP 5007
Affinity Capture-Western Homo sapiens
120 UBE2I 7329
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
121 MCM8 84515
Positive Genetic Homo sapiens
122 VSIG4  
Affinity Capture-MS Homo sapiens
123 ARHGEF1 9138
Two-hybrid Homo sapiens
124 ULK2  
Negative Genetic Homo sapiens
125 ACACA 31
Negative Genetic Homo sapiens
126 CHRNB2  
Affinity Capture-MS Homo sapiens
127 C12orf49  
Negative Genetic Homo sapiens
Proximity Label-MS Homo sapiens
128 UBR5 51366
Positive Genetic Homo sapiens
129 CCDC51 79714
Positive Genetic Homo sapiens
130 CXCR2  
Positive Genetic Homo sapiens
131 SREBF2 6721
Reconstituted Complex Homo sapiens
FRET Homo sapiens
Reconstituted Complex Homo sapiens
FRET Homo sapiens
132 TMED5 50999
Affinity Capture-MS Homo sapiens
133 PCDHGC4  
Affinity Capture-MS Homo sapiens
134 VAPA 9218
Affinity Capture-Western Homo sapiens
135 MRPS6  
Two-hybrid Homo sapiens
136 SMAD3 4088
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
137 GPR182  
Affinity Capture-MS Homo sapiens
138 SLC4A8 9498
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
139 LDLRAP1 26119
Negative Genetic Homo sapiens
140 ZNF655  
Negative Genetic Homo sapiens
141 DICER1  
Positive Genetic Homo sapiens
142 KLHL6  
Positive Genetic Homo sapiens
143 ZBTB49 166793
Positive Genetic Homo sapiens
144 NFYC 4802
Two-hybrid Homo sapiens
145 RBBP7 5931
Positive Genetic Homo sapiens
146 IL17RC 84818
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
147 LZTR1 8216
Two-hybrid Homo sapiens
148 CRMP1 1400
Negative Genetic Homo sapiens
149 MEX3A  
Negative Genetic Homo sapiens
150 UROS 7390
Positive Genetic Homo sapiens
151 UCP1  
Negative Genetic Homo sapiens
152 ADCK2  
Negative Genetic Homo sapiens
153 PRKAR1A 5573
Negative Genetic Homo sapiens
154 TMCO3 55002
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
155 SF3A3 10946
Negative Genetic Homo sapiens
156 CHRND  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
157 GPS2  
Negative Genetic Homo sapiens
158 MAP2K7 5609
Negative Genetic Homo sapiens
159 NKAIN1  
Affinity Capture-MS Homo sapiens
160 BBC3  
Negative Genetic Homo sapiens
161 ATXN1 6310
Two-hybrid Homo sapiens
162 DKK3 27122
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
163 NRG1 3084
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
164 HSPA5 3309
Two-hybrid Homo sapiens
165 RAMP2  
Affinity Capture-MS Homo sapiens
166 GLUL 2752
Positive Genetic Homo sapiens
167 BAX 581
Negative Genetic Homo sapiens
168 TTYH1  
Affinity Capture-MS Homo sapiens
169 HTRA2 27429
Negative Genetic Homo sapiens
170 EAF1  
Negative Genetic Homo sapiens
171 ATF6  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
172 CD79B 974
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
173 RNF170 81790
Affinity Capture-MS Homo sapiens
174 Rab11b 79434
Two-hybrid Rattus norvegicus
175 SLC44A1 23446
Positive Genetic Homo sapiens
176 BEND6  
Negative Genetic Homo sapiens
177 PIAS2  
Two-hybrid Homo sapiens
178 SREBF1 6720
FRET Homo sapiens
Negative Genetic Homo sapiens
Negative Genetic Homo sapiens
179 CCDC107  
Affinity Capture-MS Homo sapiens
180 ABLIM2  
Two-hybrid Homo sapiens
181 ZC4H2 55906
Positive Genetic Homo sapiens
182 PTGDR2  
Positive Genetic Homo sapiens
183 C16orf72 29035
Negative Genetic Homo sapiens
184 PIAS3  
Two-hybrid Homo sapiens
185 AZIN1 51582
Negative Genetic Homo sapiens
186 PDGFRA 5156
Positive Genetic Homo sapiens
187 TMEM242  
Positive Genetic Homo sapiens
188 SPTBN1 6711
Two-hybrid Homo sapiens
189 RTKN2  
Positive Genetic Homo sapiens
190 NR5A2  
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
191 EIF4E2  
Positive Genetic Homo sapiens
192 HNF4A  
Reconstituted Complex Homo sapiens
193 KLLN  
Positive Genetic Homo sapiens
194 SLC7A3  
Positive Genetic Homo sapiens
195 PIAS1 8554
Two-hybrid Homo sapiens
Positive Genetic Homo sapiens
196 THAP3  
Positive Genetic Homo sapiens
197 RBL2 5934
Positive Genetic Homo sapiens
198 USF2 7392
Positive Genetic Homo sapiens
199 TRAF5  
Negative Genetic Homo sapiens
200 ITGB4 3691
Two-hybrid Homo sapiens
201 EED  
Positive Genetic Homo sapiens
202 CDH5  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
203 WSB2 55884
Positive Genetic Homo sapiens
204 MFN2 9927
Negative Genetic Homo sapiens
205 PARP1 142
Positive Genetic Homo sapiens
206 CLPB 81570
Negative Genetic Homo sapiens
207 PARL  
Negative Genetic Homo sapiens
208 ATP6V0B 533
Negative Genetic Homo sapiens
209 NFYA 4800
Two-hybrid Homo sapiens
210 AZGP1 563
Negative Genetic Homo sapiens
211 TMEM88B  
Negative Genetic Homo sapiens
212 C9orf91 203197
Affinity Capture-MS Homo sapiens
213 PCDHA13  
Negative Genetic Homo sapiens
214 FHL2 2274
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
215 ZMYM2  
Two-hybrid Homo sapiens
216 ATIC 471
Positive Genetic Homo sapiens
217 GOLGB1 2804
Two-hybrid Homo sapiens
218 KLF13  
Reconstituted Complex Homo sapiens
219 FTL 2512
Negative Genetic Homo sapiens
220 TAF6 6878
Negative Genetic Homo sapiens
221 NUDT21 11051
Negative Genetic Homo sapiens
222 NR0B1  
Positive Genetic Homo sapiens
223 FASN 2194
Negative Genetic Homo sapiens
Negative Genetic Homo sapiens
224 CTR9 9646
Negative Genetic Homo sapiens
225 TTC1 7265
Two-hybrid Homo sapiens
226 KCNA2  
Affinity Capture-MS Homo sapiens
227 RAB3GAP2 25782
Negative Genetic Homo sapiens
228 DNAJC19 131118
Negative Genetic Homo sapiens
229 GP9 2815
Affinity Capture-MS Homo sapiens
230 TGIF2  
Negative Genetic Homo sapiens
231 LDLRAD1  
Affinity Capture-MS Homo sapiens
232 LINC00839  
Protein-RNA Homo sapiens
233 WNT10B 7480
Positive Genetic Homo sapiens
234 SF3B4 10262
Negative Genetic Homo sapiens
235 CNEP1R1 255919
Positive Genetic Homo sapiens
236 EPHB2 2048
Negative Genetic Homo sapiens
237 CUL5 8065
Positive Genetic Homo sapiens
238 PDHA1 5160
Negative Genetic Homo sapiens
239 C17orf105  
Negative Genetic Homo sapiens
240 MSH6 2956
Positive Genetic Homo sapiens
241 NPAT  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
242 CDH6 1004
Positive Genetic Homo sapiens
243 ERLIN2 11160
Affinity Capture-Western Homo sapiens
244 PRKAB1 5564
Positive Genetic Homo sapiens
245 CREBBP  
Far Western Homo sapiens