Gene description for LYST
Gene name lysosomal trafficking regulator
Gene symbol LYST
Other names/aliases CHS
CHS1
Species Homo sapiens
 Database cross references - LYST
ExoCarta ExoCarta_1130
Vesiclepedia VP_1130
Entrez Gene 1130
HGNC 1968
MIM 606897
UniProt Q99698  
 LYST identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for LYST
Molecular Function
    protein binding GO:0005515 IPI
Biological Process
    phagocytosis GO:0006909 IEA
    protein transport GO:0015031 IEA
    leukocyte chemotaxis GO:0030595 ISS
    melanosome organization GO:0032438 ISS
    endosome to lysosome transport via multivesicular body sorting pathway GO:0032510 IMP
    mast cell secretory granule organization GO:0033364 ISS
    natural killer cell mediated cytotoxicity GO:0042267 IMP
    defense response to bacterium GO:0042742 ISS
    defense response to protozoan GO:0042832 ISS
    pigmentation GO:0043473 IMP
    defense response to virus GO:0051607 ISS
Subcellular Localization
    microtubule cytoskeleton GO:0015630 IDA
 Experiment description of studies that identified LYST in sEVs
1
Experiment ID 235
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for LYST
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 LLGL2 3993
Affinity Capture-MS Homo sapiens
2 MYCN  
Affinity Capture-MS Homo sapiens
3 DGCR14  
Two-hybrid Homo sapiens
4 HNRNPH2 3188
Affinity Capture-MS Homo sapiens
5 CSNK2B 1460
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
6 MYH13 8735
Affinity Capture-MS Homo sapiens
7 DAP3 7818
Affinity Capture-MS Homo sapiens
8 GAR1 54433
Affinity Capture-MS Homo sapiens
9 MRPL17  
Two-hybrid Homo sapiens
10 YWHAB 7529
Two-hybrid Homo sapiens
11 ECT2 1894
Affinity Capture-MS Homo sapiens
12 Dync1li1 235661
Affinity Capture-MS Mus musculus
13 DNAJC14  
Two-hybrid Homo sapiens
14 KLC3  
Affinity Capture-MS Homo sapiens
15 CENPJ 55835
Two-hybrid Homo sapiens
16 KPNB1 3837
Two-hybrid Homo sapiens
17 MRPS31  
Two-hybrid Homo sapiens
18 HNRNPM 4670
Two-hybrid Homo sapiens
19 YWHAZ 7534
Reconstituted Complex Homo sapiens
20 EFS  
Two-hybrid Homo sapiens
21 PPIA 5478
Affinity Capture-MS Homo sapiens
22 MLH1 4292
Affinity Capture-MS Homo sapiens
23 SAP30 8819
Affinity Capture-MS Homo sapiens
24 VTA1 51534
Two-hybrid Homo sapiens
25 ATN1  
Two-hybrid Homo sapiens
26 NCDN 23154
Two-hybrid Homo sapiens
27 YWHAQ 10971
Two-hybrid Homo sapiens
28 PLS1 5357
Cross-Linking-MS (XL-MS) Homo sapiens
29 PCBP4 57060
Two-hybrid Homo sapiens
30 CELF4  
Two-hybrid Homo sapiens
31 MED12  
Two-hybrid Homo sapiens
32 ZNF521  
Two-hybrid Homo sapiens
33 MYC  
Affinity Capture-MS Homo sapiens
34 Vamp2  
Affinity Capture-MS Mus musculus
35 CNTROB  
Two-hybrid Homo sapiens
36 ESRRA  
Two-hybrid Homo sapiens
37 RAB7A 7879
Proximity Label-MS Homo sapiens
38 HGS 9146
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
39 Cep85l  
Affinity Capture-MS Mus musculus
40 TACC1 6867
Affinity Capture-MS Homo sapiens
41 Tnpo1 238799
Affinity Capture-MS Mus musculus
42 ANAPC4 29945
Affinity Capture-MS Homo sapiens
43 TNNI3  
Two-hybrid Homo sapiens
44 KIF1C 10749
Affinity Capture-MS Homo sapiens
45 Ccdc9  
Affinity Capture-MS Mus musculus
View the network image/svg+xml
 Pathways in which LYST is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here