Gene description for TRAPPC13
Gene name trafficking protein particle complex 13
Gene symbol TRAPPC13
Other names/aliases C5orf44
Species Homo sapiens
 Database cross references - TRAPPC13
ExoCarta ExoCarta_80006
Vesiclepedia VP_80006
Entrez Gene 80006
HGNC 25828
UniProt A5PLN9  
 TRAPPC13 identified in exosomes derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for TRAPPC13
Molecular Function
    protein binding GO:0005515 IPI
Biological Process
    endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888 NAS
    vesicle coating GO:0006901 NAS
    vesicle tethering GO:0099022 NAS
Subcellular Localization
    cytoplasm GO:0005737 NAS
    cytosol GO:0005829 TAS
    TRAPPII protein complex GO:1990071 NAS
    TRAPPIII protein complex GO:1990072 IBA
 Experiment description of studies that identified TRAPPC13 in exosomes
1
Experiment ID 217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘ Negative markers
✔
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for TRAPPC13
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 TRAPPC2 6399
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
2 RPSAP58 388524
Affinity Capture-MS Homo sapiens
3 PRKCD 5580
Affinity Capture-MS Homo sapiens
4 FASN 2194
Negative Genetic Homo sapiens
5 TRAPPC6B 122553
Affinity Capture-MS Homo sapiens
6 Kif2c 73804
Affinity Capture-MS Mus musculus
7 TRAPPC5 126003
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 TSSC1 7260
Synthetic Lethality Homo sapiens
9 C10orf76  
Synthetic Lethality Homo sapiens
10 ATG9A 79065
Proximity Label-MS Homo sapiens
11 RAB1B 81876
Synthetic Lethality Homo sapiens
12 GOSR1 9527
Synthetic Lethality Homo sapiens
13 TBC1D14 57533
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
14 TRAPPC8 22878
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
15 ARL3 403
Affinity Capture-MS Homo sapiens
16 Timeless  
Affinity Capture-MS Mus musculus
17 GAB2 9846
Affinity Capture-MS Homo sapiens
18 RAB1A 5861
Synthetic Lethality Homo sapiens
19 CMBL 134147
Affinity Capture-MS Homo sapiens
20 TRAPPC1 58485
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
21 Trappc8  
Affinity Capture-MS Mus musculus
22 PRKCI 5584
Affinity Capture-MS Homo sapiens
23 UBB 7314
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 COG6 57511
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 RAB43 339122
Affinity Capture-MS Homo sapiens
26 SYCE1L  
Two-hybrid Homo sapiens
27 Kcnk1  
Affinity Capture-MS Mus musculus
28 TRAPPC11 60684
Affinity Capture-MS Homo sapiens
29 FOS 2353
Affinity Capture-MS Homo sapiens
30 ZBTB3  
Affinity Capture-MS Homo sapiens
31 Wdr61  
Affinity Capture-MS Mus musculus
32 TRAPPC3 27095
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
33 TRAPPC12 51112
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 TRAPPC2L 51693
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
35 SAMD9 54809
Affinity Capture-MS Homo sapiens
36 DNAJC10 54431
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
37 OTUB2  
Affinity Capture-MS Homo sapiens
38 TRAPPC2B  
Affinity Capture-MS Homo sapiens
39 PPP4R2  
Affinity Capture-MS Homo sapiens
40 Magoh  
Affinity Capture-MS Mus musculus
41 PTAR1 375743
Synthetic Lethality Homo sapiens
42 CDT1  
Affinity Capture-MS Homo sapiens
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