Gene ontology annotations for TRAPPC5
Experiment description of studies that identified TRAPPC5 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for TRAPPC5
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
TRAPPC3L
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
2
TRAPPC2
6399
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Cross-Linking-MS (XL-MS)
Homo sapiens
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
3
RIT1
6016
Negative Genetic
Homo sapiens
4
RUFY4
Affinity Capture-MS
Homo sapiens
5
TRAPPC9
83696
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
6
LYPD3
27076
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
7
CCNDBP1
23582
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
8
IL13RA2
3598
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
9
TRAPPC11
60684
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
10
IFNA6
Affinity Capture-MS
Homo sapiens
11
TRAPPC1
58485
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
TRAPPC10
7109
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
13
CABS1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
14
ATG9A
79065
Proximity Label-MS
Homo sapiens
15
ZADH2
284273
Affinity Capture-MS
Homo sapiens
16
ACAA1
30
Co-fractionation
Homo sapiens
17
STMN4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
18
TBC1D14
57533
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
19
TRAPPC8
22878
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
20
PTCH1
Affinity Capture-MS
Homo sapiens
21
ERGIC3
51614
Affinity Capture-MS
Homo sapiens
22
ADI1
55256
Affinity Capture-MS
Homo sapiens
23
NPY2R
Affinity Capture-MS
Homo sapiens
24
EGFR
1956
Affinity Capture-MS
Homo sapiens
Negative Genetic
Homo sapiens
25
KLRD1
Affinity Capture-MS
Homo sapiens
26
TRAPPC6A
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
27
SLC18A2
Affinity Capture-MS
Homo sapiens
28
TRAPPC13
80006
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
29
AQP3
Affinity Capture-MS
Homo sapiens
30
PRAMEF17
Affinity Capture-MS
Homo sapiens
31
DDX58
23586
Affinity Capture-RNA
Homo sapiens
32
TRAPPC2B
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
33
A2M
2
Two-hybrid
Homo sapiens
34
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
35
Trappc8
Affinity Capture-MS
Mus musculus
36
HOXB6
3216
Affinity Capture-MS
Homo sapiens
37
S100A6
6277
Affinity Capture-MS
Homo sapiens
38
PCDHGB1
Affinity Capture-MS
Homo sapiens
39
RAB43
339122
Affinity Capture-MS
Homo sapiens
40
BTBD1
Affinity Capture-MS
Homo sapiens
41
C7orf43
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
42
SLC22A4
6583
Affinity Capture-MS
Homo sapiens
43
RPA3
6119
Proximity Label-MS
Homo sapiens
44
FAM69A
388650
Affinity Capture-MS
Homo sapiens
45
TRAPPC4
51399
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
46
MCM2
4171
Affinity Capture-MS
Homo sapiens
47
TRAPPC3
27095
Two-hybrid
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
48
TRAPPC12
51112
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
49
TRAPPC2L
51693
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
50
FAM174A
345757
Affinity Capture-MS
Homo sapiens
51
KANK4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
52
KRAS
3845
Negative Genetic
Homo sapiens
53
ANP32C
23520
Affinity Capture-MS
Homo sapiens
54
UBXN6
80700
Affinity Capture-MS
Homo sapiens
55
TPCN2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
56
BCL2L14
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
57
MTL5
Affinity Capture-MS
Homo sapiens
58
GAB2
9846
Affinity Capture-MS
Homo sapiens
59
NANOG
Affinity Capture-MS
Homo sapiens
60
Trappc11
Affinity Capture-MS
Mus musculus
61
HMG20A
Two-hybrid
Homo sapiens
62
RANBP17
Co-fractionation
Homo sapiens
63
SLC2A9
Affinity Capture-MS
Homo sapiens
64
GLB1
2720
Affinity Capture-MS
Homo sapiens
65
ITGA8
8516
Affinity Capture-MS
Homo sapiens
66
POU5F1
Affinity Capture-MS
Homo sapiens
67
TRAPPC6B
122553
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which TRAPPC5 is involved