Gene description for NGFR
Gene name nerve growth factor receptor
Gene symbol NGFR
Other names/aliases CD271
Gp80-LNGFR
TNFRSF16
p75(NTR)
p75NTR
Species Homo sapiens
 Database cross references - NGFR
ExoCarta ExoCarta_4804
Vesiclepedia VP_4804
Entrez Gene 4804
HGNC 7809
MIM 162010
UniProt P08138  
 NGFR identified in exosomes derived from the following tissue/cell type
Melanocytes 34957415    
Melanoma cells 25950383    
Melanoma cells 34957415    
Melanoma cells 34957415    
Melanoma cells 34957415    
Melanoma cells 34957415    
Melanoma cells 34957415    
 Gene ontology annotations for NGFR
Molecular Function
    nerve growth factor binding GO:0048406 IEA
    protein binding GO:0005515 IPI
    transmembrane signaling receptor activity GO:0004888 TAS
    Rab GTPase binding GO:0017137 ISS
    death receptor activity GO:0005035 IEA
    signal transducer activity GO:0004871 TAS
    ubiquitin protein ligase binding GO:0031625 IPI
    receptor activity GO:0004872 TAS
Biological Process
    nerve development GO:0021675 IEA
    positive regulation of axonogenesis GO:0050772 TAS
    circadian regulation of gene expression GO:0032922 ISS
    membrane protein intracellular domain proteolysis GO:0031293 TAS
    negative regulation of fibroblast growth factor receptor signaling pathway GO:0040037 IEA
    negative regulation of hair follicle development GO:0051799 IEA
    regulation of glucose import in response to insulin stimulus GO:2001273 ISS
    positive regulation of odontogenesis of dentin-containing tooth GO:0042488 IEA
    positive regulation of fibroblast proliferation GO:0048146 IEA
    glucose homeostasis GO:0042593 ISS
    hair follicle morphogenesis GO:0031069 IEA
    positive regulation of apoptotic signaling pathway GO:2001235 IEA
    detection of temperature stimulus GO:0016048 IEA
    negative regulation of apoptotic process GO:0043066 TAS
    intracellular protein transport GO:0006886 ISS
    regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0043281 TAS
    regulation of axonogenesis GO:0050770 TAS
    negative regulation of cell cycle GO:0045786 TAS
    central nervous system development GO:0007417 IEA
    neurotrophin TRK receptor signaling pathway GO:0048011 TAS
    positive regulation of apoptotic process GO:0043065 TAS
    apoptotic signaling pathway GO:0097190 TAS
    axon guidance GO:0007411 IEA
    negative regulation of axonogenesis GO:0050771 TAS
Subcellular Localization
    cell surface GO:0009986 ISS
    neuronal postsynaptic density GO:0097481 IEA
    cytosol GO:0005829 TAS
    nucleoplasm GO:0005654 TAS
    endosome GO:0005768 TAS
    integral component of plasma membrane GO:0005887 TAS
    plasma membrane GO:0005886 TAS
    extracellular region GO:0005576 TAS
 Experiment description of studies that identified NGFR in exosomes
1
Experiment ID 1110
MISEV standards
EV Biophysical techniques
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanocytes
Sample name Melano3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
2
Experiment ID 259
MISEV standards
EM
EV Biophysical techniques
TSG101|FLOT1
EV Enriched markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name A375M
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
3
Experiment ID 1107
MISEV standards
EM
EV Biophysical techniques
CD63|CD81|GAPDH
EV Enriched markers
GOLGA2|CANX
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Western blotting
Flow cytometry
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name SK-MEL-147
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Flow cytometry
4
Experiment ID 1113
MISEV standards
EV Biophysical techniques
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
Flow cytometry
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name SK-MEL-28
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Flow cytometry
5
Experiment ID 1114
MISEV standards
EV Biophysical techniques
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name SK-MEL-103
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
6
Experiment ID 1115
MISEV standards
EV Biophysical techniques
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name SK-MEL-147
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
7
Experiment ID 1116
MISEV standards
EV Biophysical techniques
EV Enriched markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Western blotting
PubMed ID 34957415    
Organism Homo sapiens
Experiment description Melanoma-derived small extracellular vesicles induce lymphangiogenesis and metastasis through an NGFR-dependent mechanism
Authors García-Silva S, Benito-Martín A, Nogués L, Hernández-Barranco A, Mazariegos MS, Santos V, Hergueta-Redondo M, Ximénez-Embún P, Kataru RP, Lopez AA, Merino C, Sánchez-Redondo S, Graña-Castro O, Matei I, Nicolás-Avila JÁ, Torres-Ruiz R, Rodríguez-Perales S, Martínez L, Pérez-Martínez M, Mata G, Szumera-Ciećkiewicz A, Kalinowska I, Saltari A, Martínez-Gómez JM, Hogan SA, Saragovi HU, Ortega S, Garcia-Martin C, Boskovic J, Levesque MP, Rutkowski P, Hidalgo A, Muñoz J, Megías D, Mehrara BJ, Lyden D, Peinado H.
Journal name Nat Cancer
Publication year 2021
Sample Melanoma cells
Sample name SK-MEL-147
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
 Protein-protein interactions for NGFR
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 FSCN1 6624
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
2 TRAF2 7186
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
3 TRAF3 7187
Affinity Capture-Western Homo sapiens
4 NGFRAP1  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
5 TRADD 8717
Affinity Capture-Western Homo sapiens
6 TRAF6 7189
Affinity Capture-Western Homo sapiens
7 NTRK3 4916
Invivo Homo sapiens
8 NDNL2 56160
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
9 PRKACB 5567
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
10 CAV1 857
Reconstituted Complex Homo sapiens
11 SHC1 6464
Invivo Homo sapiens
12 NDN 4692
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
13 NTRK1 4914
Invivo Homo sapiens
14 MAGEH1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
15 NGFB  
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
16 TRAF4 9618
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
17 MAGED1 9500
Affinity Capture-Western Homo sapiens
18 TRAF5  
Affinity Capture-Western Homo sapiens
19 TRAF1 7185
Affinity Capture-Western Homo sapiens
View the network image/svg+xml



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