Experiment description of studies that identified UHRF1BP1 in exosomes

1 Experiment ID 226 MISEV standards ✔ EM Biophysical techniques ✔ GAPDH|CD9|FLOT1 Enriched markers ✔ LMNA|H2AFX|ATP5A1|TOMM20 Negative markers ✘ Particle analysis Identified molecule mRNA Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa) PubMed ID 26027894     Organism Homo sapiens Experiment description Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting Authors Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar Journal name Journal of Extracellular Vesicles Publication year 2015 Sample Endothelial cells Sample name HMEC-1 Isolation/purification methods Differential ultracentrifugation Sucrose density gradient Flotation density 1.10 g/mL Molecules identified in the study miRNA Protein snoRNA lncRNA yRNA snRNA mRNA ncRNA mtRNA vtRNA scaRNA lincRNA Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa) Western blotting

Protein-protein interactions for UHRF1BP1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 ZNF644   Affinity Capture-MS Homo sapiens 2 CALML3 810 Affinity Capture-MS Homo sapiens 3 RAB9A 9367 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 4 HNRNPD 3184 Affinity Capture-MS Homo sapiens 5 FAM131B   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 6 RAB35 11021 Proximity Label-MS Homo sapiens 7 STK16 8576 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 8 LINC01587   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 9 LAMTOR1 55004 Proximity Label-MS Homo sapiens 10 UQCC2   Affinity Capture-MS Homo sapiens 11 CREB3L3   Affinity Capture-MS Homo sapiens 12 Tmed10 68581 Affinity Capture-MS Mus musculus 13 BAG6 7917 Affinity Capture-MS Homo sapiens 14 LAMP3   Proximity Label-MS Homo sapiens 15 RAB5A 5868 Proximity Label-MS Homo sapiens 16 RAB11A 8766 Proximity Label-MS Homo sapiens 17 DNMT1 1786 Affinity Capture-MS Homo sapiens 18 EPB41L5 57669 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 19 MEF2BNB   Affinity Capture-MS Homo sapiens 20 TSG101 7251 Affinity Capture-MS Homo sapiens 21 ATG9A 79065 Proximity Label-MS Homo sapiens 22 LAMP2 3920 Proximity Label-MS Homo sapiens 23 USP11 8237 Affinity Capture-MS Homo sapiens 24 RAB14 51552 Affinity Capture-MS Homo sapiens 25 CALM1 801 Affinity Capture-MS Homo sapiens 26 CBY1   Affinity Capture-MS Homo sapiens 27 CREB3L1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 28 SSH3 54961 Affinity Capture-MS Homo sapiens 29 PCNA 5111 Affinity Capture-MS Homo sapiens 30 RAB4A 5867 Proximity Label-MS Homo sapiens 31 SGTB   Affinity Capture-MS Homo sapiens 32 RPA3 6119 Proximity Label-MS Homo sapiens 33 DNAJC5 80331 Proximity Label-MS Homo sapiens 34 WDR5 11091 Affinity Capture-MS Homo sapiens 35 RAB30 27314 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 36 FIS1 51024 Affinity Capture-MS Homo sapiens 37 RPA4   Proximity Label-MS Homo sapiens 38 RAPGEF2 9693 Affinity Capture-MS Homo sapiens 39 SLC7A6 9057 Affinity Capture-MS Homo sapiens 40 DIO3   Affinity Capture-MS Homo sapiens 41 NPAS1   Affinity Capture-MS Homo sapiens 42 NEDD1 121441 Affinity Capture-MS Homo sapiens 43 FOXK2   Affinity Capture-MS Homo sapiens 44 RASEF   Affinity Capture-MS Homo sapiens 45 Tube1   Affinity Capture-MS Mus musculus 46 GOLGA1   Proximity Label-MS Homo sapiens 47 SYNCRIP 10492 Affinity Capture-MS Homo sapiens 48 RPA2 6118 Proximity Label-MS Homo sapiens 49 ALDH3B1 221 Affinity Capture-MS Homo sapiens 50 RAB3B 5865 Proximity Label-MS Homo sapiens 51 RAB7A 7879 Proximity Label-MS Homo sapiens 52 CREB3   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 53 ACTL6B   Affinity Capture-MS Homo sapiens 54 UHRF1 29128 Affinity Capture-MS Homo sapiens Affinity Capture-Western Homo sapiens Affinity Capture-Western Homo sapiens 55 KRT2 3849 Affinity Capture-MS Homo sapiens 56 MMP24 10893 Affinity Capture-MS Homo sapiens 57 CEP76   Affinity Capture-MS Homo sapiens 58 Ufl1   Affinity Capture-MS Mus musculus 59 HMG20A   Affinity Capture-MS Homo sapiens 60 Bcl7c   Affinity Capture-MS Mus musculus 61 FOXK1 221937 Affinity Capture-MS Homo sapiens 62 DEF8   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 63 STX6 10228 Proximity Label-MS Homo sapiens 64 GDAP2 54834 Affinity Capture-MS Homo sapiens View the network

Pathways in which UHRF1BP1 is involved

No pathways found