Gene description for CD74
Gene name CD74 molecule, major histocompatibility complex, class II invariant chain
Gene symbol CD74
Other names/aliases DHLAG
HLADG
II
Ia-GAMMA
Species Homo sapiens
 Database cross references - CD74
ExoCarta ExoCarta_972
Vesiclepedia VP_972
Entrez Gene 972
HGNC 1697
MIM 142790
UniProt P04233  
 CD74 identified in exosomes derived from the following tissue/cell type
B cells 20458337    
B cells 20458337    
B cells 20458337    
Thymus 23844026    
 Gene ontology annotations for CD74
Molecular Function
    amyloid-beta binding GO:0001540 IPI
    cytokine receptor activity GO:0004896 IBA
    cytokine receptor activity GO:0004896 IDA
    protein binding GO:0005515 IPI
    cytokine binding GO:0019955 IPI
    MHC class II protein complex binding GO:0023026 IDA
    macrophage migration inhibitory factor binding GO:0035718 IBA
    macrophage migration inhibitory factor binding GO:0035718 IPI
    MHC class II protein binding GO:0042289 IBA
    MHC class II protein binding GO:0042289 ISS
    MHC class II protein binding GO:0042289 NAS
    CD4 receptor binding GO:0042609 IPI
    MHC class II protein binding, via antigen binding groove GO:0042658 IDA
    identical protein binding GO:0042802 TAS
    protein folding chaperone GO:0044183 IDA
    nitric-oxide synthase binding GO:0050998 IEA
Biological Process
    prostaglandin biosynthetic process GO:0001516 IDA
    positive regulation of protein phosphorylation GO:0001934 IDA
    positive regulation of cytokine-mediated signaling pathway GO:0001961 IBA
    positive regulation of cytokine-mediated signaling pathway GO:0001961 IMP
    T cell activation involved in immune response GO:0002286 IBA
    positive regulation of dendritic cell antigen processing and presentation GO:0002606 IEA
    negative regulation of peptide secretion GO:0002792 IDA
    positive regulation of type 2 immune response GO:0002830 IBA
    negative regulation of mature B cell apoptotic process GO:0002906 IEA
    intracellular protein transport GO:0006886 ISS
    positive regulation of gene expression GO:0010628 IMP
    immunoglobulin mediated immune response GO:0016064 ISS
    antigen processing and presentation GO:0019882 IBA
    antigen processing and presentation of endogenous antigen GO:0019883 NAS
    antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0019886 IEA
    negative regulation of cell migration GO:0030336 IMP
    positive regulation of B cell proliferation GO:0030890 IMP
    positive regulation of prostaglandin biosynthetic process GO:0031394 IMP
    positive regulation of chemokine production GO:0032722 IMP
    positive regulation of interleukin-6 production GO:0032755 IMP
    positive regulation of interleukin-8 production GO:0032757 IMP
    positive regulation of kinase activity GO:0033674 IDA
    response to type II interferon GO:0034341 IDA
    macrophage migration inhibitory factor signaling pathway GO:0035691 IEA
    regulation of macrophage activation GO:0043030 NAS
    negative regulation of apoptotic process GO:0043066 IDA
    positive regulation of canonical NF-kappaB signal transduction GO:0043123 IDA
    positive regulation of MAPK cascade GO:0043410 IDA
    negative regulation of DNA damage response, signal transduction by p53 class mediator GO:0043518 IBA
    negative regulation of DNA damage response, signal transduction by p53 class mediator GO:0043518 IDA
    T cell selection GO:0045058 NAS
    positive thymic T cell selection GO:0045059 IEA
    negative thymic T cell selection GO:0045060 IEA
    negative regulation of T cell differentiation GO:0045581 IEA
    positive regulation of T cell differentiation GO:0045582 IEA
    positive regulation of monocyte differentiation GO:0045657 IDA
    positive regulation of DNA-templated transcription GO:0045893 IDA
    negative regulation of viral entry into host cell GO:0046597 IDA
    positive regulation of viral entry into host cell GO:0046598 IDA
    positive regulation of fibroblast proliferation GO:0048146 IMP
    protein stabilization GO:0050821 ISS
    chaperone cofactor-dependent protein refolding GO:0051085 IEA
    positive regulation of macrophage cytokine production GO:0060907 IBA
    positive regulation of macrophage cytokine production GO:0060907 ISS
    protein-containing complex assembly GO:0065003 ISS
    protein trimerization GO:0070206 IEA
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IBA
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IDA
    positive regulation of ERK1 and ERK2 cascade GO:0070374 IMP
    positive regulation of neutrophil chemotaxis GO:0090023 ISS
    negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:1902166 IBA
    negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator GO:1902166 IMP
    positive regulation of chemokine (C-X-C motif) ligand 2 production GO:2000343 ISS
    positive regulation of macrophage migration inhibitory factor signaling pathway GO:2000448 IMP
Subcellular Localization
    Golgi membrane GO:0000139 TAS
    nucleus GO:0005634 IDA
    cytoplasm GO:0005737 IBA
    cytoplasm GO:0005737 IDA
    lysosome GO:0005764 ISS
    lysosomal membrane GO:0005765 TAS
    late endosome GO:0005770 ISS
    multivesicular body GO:0005771 IEA
    vacuole GO:0005773 IDA
    plasma membrane GO:0005886 IDA
    plasma membrane GO:0005886 TAS
    external side of plasma membrane GO:0009897 IEA
    cell surface GO:0009986 IBA
    cell surface GO:0009986 IDA
    ER to Golgi transport vesicle membrane GO:0012507 TAS
    membrane GO:0016020 HDA
    membrane GO:0016020 IDA
    transport vesicle membrane GO:0030658 TAS
    endocytic vesicle membrane GO:0030666 TAS
    clathrin-coated endocytic vesicle membrane GO:0030669 TAS
    trans-Golgi network membrane GO:0032588 TAS
    protein-containing complex GO:0032991 IDA
    macrophage migration inhibitory factor receptor complex GO:0035692 IDA
    NOS2-CD74 complex GO:0035693 IEA
    MHC class II protein complex GO:0042613 ISS
    lysosomal lumen GO:0043202 TAS
    extracellular exosome GO:0070062 HDA
    lumenal side of endoplasmic reticulum membrane GO:0098553 TAS
 Experiment description of studies that identified CD74 in exosomes
1
Experiment ID 79
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
2
Experiment ID 80
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis -Sample 2
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
3
Experiment ID 81
MISEV standards
Biophysical techniques
CD81|MHCII
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20458337    
Organism Homo sapiens
Experiment description MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors "Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name ICB
Publication year 2010
Sample B cells
Sample name RN (HLA-DR15)
Isolation/purification methods Differential centrifugation
Sucrose density gradient
Immunobeads (MHC Class II)
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [FT-ICR]
Western blotting
4
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for CD74
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 APP 351
Reconstituted Complex Homo sapiens
2 EIF3A 8661
Affinity Capture-MS Homo sapiens
3 DDX60 55601
Affinity Capture-MS Homo sapiens
4 COPG2 26958
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 HLA-DRA 3122
Affinity Capture-MS Homo sapiens
6 EIF2S1 1965
Affinity Capture-MS Homo sapiens
7 TM4SF20  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 HLA-DPB1 3115
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
9 ASCC3 10973
Affinity Capture-MS Homo sapiens
10 HADHA 3030
Two-hybrid Homo sapiens
11 HLA-DRB1 3123
Affinity Capture-MS Homo sapiens
12 CANX 821
Affinity Capture-MS Homo sapiens
13 DNAJB12 54788
Affinity Capture-MS Homo sapiens
14 EIF2S3 1968
Affinity Capture-MS Homo sapiens
15 EIF3K 27335
Affinity Capture-MS Homo sapiens
16 EIF3C 8663
Affinity Capture-MS Homo sapiens
17 ASNS 440
Affinity Capture-MS Homo sapiens
18 ASCC1 51008
Affinity Capture-MS Homo sapiens
19 COPB1 1315
Affinity Capture-MS Homo sapiens
20 ROPN1L  
Affinity Capture-MS Homo sapiens
21 EIF3I 8668
Affinity Capture-MS Homo sapiens
22 PGRMC1 10857
Affinity Capture-MS Homo sapiens
23 ARCN1 372
Affinity Capture-MS Homo sapiens
24 CD74 972
Co-purification Homo sapiens
Co-purification Homo sapiens
25 MAP3K1 4214
Biochemical Activity Homo sapiens
26 EIF3F 8665
Affinity Capture-MS Homo sapiens
27 COPE 11316
Affinity Capture-MS Homo sapiens
28 EIF2B3 8891
Affinity Capture-MS Homo sapiens
29 COPA 1314
Affinity Capture-MS Homo sapiens
30 ANKRD28 23243
Affinity Capture-MS Homo sapiens
31 EIF2B5 8893
Affinity Capture-MS Homo sapiens
32 LAMTOR5 10542
Two-hybrid Homo sapiens
33 AKAP8  
Affinity Capture-MS Homo sapiens
34 MIF 4282
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
35 HLA-DQA1 3117
Co-localization Homo sapiens
36 EIF3J 8669
Affinity Capture-MS Homo sapiens
37 HLA-DRB3 3125
Affinity Capture-MS Homo sapiens
38 EIF1 10209
Affinity Capture-MS Homo sapiens
39 EIF3G 8666
Affinity Capture-MS Homo sapiens
40 COPB2 9276
Affinity Capture-MS Homo sapiens
41 EIF3B 8662
Affinity Capture-MS Homo sapiens
42 DGKE  
Affinity Capture-MS Homo sapiens
43 CUL7 9820
Affinity Capture-MS Homo sapiens
44 CHAF1B  
Affinity Capture-MS Homo sapiens
45 AP3D1 8943
Affinity Capture-MS Homo sapiens
46 CCR1  
Two-hybrid Homo sapiens
47 COPG1 22820
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
48 EIF3E 3646
Affinity Capture-MS Homo sapiens
49 EIF2B4 8890
Affinity Capture-MS Homo sapiens
50 DNAJB11 51726
Affinity Capture-MS Homo sapiens
51 EIF3D 8664
Affinity Capture-MS Homo sapiens
52 EIF3H 8667
Affinity Capture-MS Homo sapiens
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