Gene ontology annotations for KRT76
Experiment description of studies that identified KRT76 in exosomes
1
Experiment ID
21
MISEV standards
✔
EM|IEM
Biophysical techniques
✔
Alix|TSG101|HSP70|CD63
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
PubMed ID
19837982
Organism
Homo sapiens
Experiment description
Proteomic and bioinformatic analysis of immunoaffinity-purified exosomes derived from the human colon tumor cell line LIM1215.
Authors
"Suresh Mathivanan, Justin W.E. Lim, Bow J. Tauro, Hong Ji, Robert L. Moritz and Richard J. Simpson"
Journal name
MCP
Publication year
2009
Sample
Colorectal cancer cells
Sample name
LIM1215
Isolation/purification methods
Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.10-1.12 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [Orbitrap] Western blotting
2
Experiment ID
207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
4
Experiment ID
209
MISEV standards
✘
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
5
Experiment ID
126
MISEV standards
✘
Biophysical techniques
✔
GAPDH
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry [LTQ-FT Ultra]
PubMed ID
Unpublished / Not applicable
Organism
Homo sapiens
Experiment description
Mesenchymal Stem Cell Exosomes: The Future MSC-based Therapy?
Authors
"Ruenn Chai Lai, Ronne Wee Yeh Yeo, Soon Sim Tan, Bin Zhang, Yijun Yin, Newman Siu Kwan Sze, Andre Choo, and Sai Kiang Lim"
Journal name
Mesenchymal Stem Cell Therapy
Publication year
2011
Sample
Mesenchymal stem cells
Sample name
huES9.E1
Isolation/purification methods
HPLC
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Antobody array Mass spectrometry
6
Experiment ID
224
MISEV standards
✔
EM|AFM
Biophysical techniques
✔
Alix|TSG101|CD63|CD81
Enriched markers
✔
GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25944692
Organism
Homo sapiens
Experiment description
Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes
Authors
"Keerthikumar S, Gangoda L, Liem M, Fonseka P, Atukorala I, Ozcitti C, Mechler A, Adda CG, Ang CS, Mathivanan S"
Journal name
Oncotarget
Publication year
2015
Sample
Neuroblastoma cells
Sample name
SH-SY5Y
Isolation/purification methods
Differential centrifugation Ultracentrifugation OptiPrep density gradient
Flotation density
1.10 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry Western blotting
7
Experiment ID
191
MISEV standards
✘
Biophysical techniques
✔
Alix|CD81|CD9
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20124223
Organism
Homo sapiens
Experiment description
Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors
"Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK."
Journal name
Mol Cell Proteomics
Publication year
2010
Sample
Squamous carcinoma cells
Sample name
Squamous carcinoma cell (A431)
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for KRT76
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
INSIG1
Affinity Capture-MS
Homo sapiens
2
KRT84
3890
Cross-Linking-MS (XL-MS)
Homo sapiens
3
KRT37
8688
Two-hybrid
Homo sapiens
4
TFCP2
7024
Affinity Capture-MS
Homo sapiens
5
KRT27
342574
Two-hybrid
Homo sapiens
6
KRT16
3868
Cross-Linking-MS (XL-MS)
Homo sapiens
Two-hybrid
Homo sapiens
7
LMO4
Two-hybrid
Homo sapiens
8
KRT36
8689
Two-hybrid
Homo sapiens
9
KRT25
147183
Two-hybrid
Homo sapiens
10
EXOC8
149371
Two-hybrid
Homo sapiens
11
FRS3
10817
Two-hybrid
Homo sapiens
12
C1orf216
Two-hybrid
Homo sapiens
13
KIFC3
3801
Two-hybrid
Homo sapiens
14
INSIG2
Affinity Capture-MS
Homo sapiens
15
KRT86
Two-hybrid
Homo sapiens
16
KRT6A
3853
Cross-Linking-MS (XL-MS)
Homo sapiens
17
LCA5L
Two-hybrid
Homo sapiens
18
CCDC57
284001
Two-hybrid
Homo sapiens
19
COPS6
10980
Affinity Capture-MS
Homo sapiens
20
CRK
1398
Affinity Capture-MS
Homo sapiens
21
KRT10
3858
Cross-Linking-MS (XL-MS)
Homo sapiens
22
TRIM27
Two-hybrid
Homo sapiens
23
WASH1
100287171
Two-hybrid
Homo sapiens
24
CDC37
11140
Two-hybrid
Homo sapiens
25
CUL3
8452
Affinity Capture-MS
Homo sapiens
26
DES
1674
Cross-Linking-MS (XL-MS)
Homo sapiens
27
KRT39
Two-hybrid
Homo sapiens
28
PRPH
5630
Cross-Linking-MS (XL-MS)
Homo sapiens
29
CAND1
55832
Affinity Capture-MS
Homo sapiens
30
RNF208
Affinity Capture-MS
Homo sapiens
31
TRIM54
Two-hybrid
Homo sapiens
32
DPPA3
Two-hybrid
Homo sapiens
33
CUL4B
8450
Affinity Capture-MS
Homo sapiens
34
NFKBID
Two-hybrid
Homo sapiens
35
KRT15
3866
Cross-Linking-MS (XL-MS)
Homo sapiens
36
ZNF655
Two-hybrid
Homo sapiens
37
KRT17
3872
Cross-Linking-MS (XL-MS)
Homo sapiens
38
KRT19
3880
Cross-Linking-MS (XL-MS)
Homo sapiens
39
KRT20
54474
Two-hybrid
Homo sapiens
Cross-Linking-MS (XL-MS)
Homo sapiens
40
KRT38
8687
Two-hybrid
Homo sapiens
41
POLR1C
9533
Two-hybrid
Homo sapiens
42
TRIM23
373
Two-hybrid
Homo sapiens
43
KRT12
3859
Cross-Linking-MS (XL-MS)
Homo sapiens
44
C1orf109
Two-hybrid
Homo sapiens
45
KRT75
9119
Two-hybrid
Homo sapiens
Cross-Linking-MS (XL-MS)
Homo sapiens
46
NEDD8
4738
Affinity Capture-MS
Homo sapiens
47
IQUB
Two-hybrid
Homo sapiens
48
TNS2
23371
Two-hybrid
Homo sapiens
49
COPS5
10987
Affinity Capture-MS
Homo sapiens
50
KRT40
Two-hybrid
Homo sapiens
51
HGS
9146
Two-hybrid
Homo sapiens
52
FOXR2
Two-hybrid
Homo sapiens
53
CUL2
8453
Affinity Capture-MS
Homo sapiens
54
VIM
7431
Cross-Linking-MS (XL-MS)
Homo sapiens
55
MTUS2
23281
Two-hybrid
Homo sapiens
56
KRT5
3852
Cross-Linking-MS (XL-MS)
Homo sapiens
57
YAP1
10413
Affinity Capture-MS
Homo sapiens
58
KRT7
3855
Cross-Linking-MS (XL-MS)
Homo sapiens
59
TSGA10
Two-hybrid
Homo sapiens
60
CUL4A
8451
Affinity Capture-MS
Homo sapiens
61
KRT14
3861
Cross-Linking-MS (XL-MS)
Homo sapiens
62
C6orf165
Two-hybrid
Homo sapiens
View the network
image/svg+xml
Pathways in which KRT76 is involved