Experiment description of studies that identified ANKRD40 in exosomes

1 Experiment ID 226 MISEV standards ✔ EM Biophysical techniques ✔ GAPDH|CD9|FLOT1 Enriched markers ✔ LMNA|H2AFX|ATP5A1|TOMM20 Negative markers ✘ Particle analysis Identified molecule mRNA Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa) PubMed ID 26027894     Organism Homo sapiens Experiment description Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting Authors Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar Journal name Journal of Extracellular Vesicles Publication year 2015 Sample Endothelial cells Sample name HMEC-1 Isolation/purification methods Differential ultracentrifugation Sucrose density gradient Flotation density 1.10 g/mL Molecules identified in the study miRNA Protein snoRNA lncRNA yRNA snRNA mRNA ncRNA mtRNA vtRNA scaRNA lincRNA Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa) Western blotting

Protein-protein interactions for ANKRD40

Protein Interactor ExoCarta ID Identification method PubMed Species 1 PRTN3 5657 Affinity Capture-MS Homo sapiens 2 NAA38   Affinity Capture-MS Homo sapiens 3 SUMF2 25870 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 4 PRSS33 260429 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 5 SLC25A18   Affinity Capture-MS Homo sapiens 6 SDCBP 6386 Two-hybrid Homo sapiens 7 SOX5 6660 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 8 AHCY 191 Two-hybrid Homo sapiens Affinity Capture-MS Homo sapiens Two-hybrid Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 9 SPHK1 8877 Affinity Capture-MS Homo sapiens 10 RAD23A 5886 Two-hybrid Homo sapiens 11 ELP6 54859 Co-fractionation Homo sapiens 12 ULK4   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 13 FAM109A   Affinity Capture-MS Homo sapiens 14 RBM24 221662 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 15 SLC25A2   Affinity Capture-MS Homo sapiens 16 AGO2 27161 Affinity Capture-MS Homo sapiens 17 SLC25A48   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 18 PIN1 5300 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 19 CES1P1   Affinity Capture-MS Homo sapiens 20 SLC25A47   Affinity Capture-MS Homo sapiens 21 LTA   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 22 PNPLA1 285848 Affinity Capture-MS Homo sapiens 23 TUBGCP3 10426 Affinity Capture-MS Homo sapiens 24 WDR86   Affinity Capture-MS Homo sapiens 25 YWHAZ 7534 Affinity Capture-MS Homo sapiens 26 ANKRD40 91369 Two-hybrid Homo sapiens Two-hybrid Homo sapiens 27 CELA2B   Affinity Capture-MS Homo sapiens 28 PDDC1 347862 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 29 ELAVL1 1994 Affinity Capture-RNA Homo sapiens 30 VHL   Affinity Capture-MS Homo sapiens 31 PRR27 401137 Affinity Capture-MS Homo sapiens 32 ENDOV   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 33 TYSND1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 34 EP400   Affinity Capture-MS Homo sapiens 35 MSX2   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 36 RCBTB1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 37 MTMR11   Affinity Capture-MS Homo sapiens 38 NXF1 10482 Affinity Capture-RNA Homo sapiens 39 TPRG1L 127262 Affinity Capture-MS Homo sapiens 40 RBFOX2 23543 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 41 ADAMTS12 81792 Affinity Capture-MS Homo sapiens 42 MYO6 4646 Proximity Label-MS Homo sapiens 43 TRMU   Affinity Capture-MS Homo sapiens 44 MSI2 124540 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 45 ENTPD1 953 Affinity Capture-MS Homo sapiens 46 PIGT 51604 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 47 PHYHIP 9796 Affinity Capture-MS Homo sapiens 48 DNPEP 23549 Affinity Capture-MS Homo sapiens 49 C1orf94   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 50 WDR90   Affinity Capture-MS Homo sapiens 51 F12   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 52 RFC3 5983 Two-hybrid Homo sapiens 53 B9D2 80776 Affinity Capture-MS Homo sapiens 54 PQLC2L   Affinity Capture-MS Homo sapiens 55 ENO1 2023 Affinity Capture-RNA Homo sapiens 56 LAGE3   Affinity Capture-MS Homo sapiens 57 NUP210P1   Affinity Capture-MS Homo sapiens 58 EHBP1L1 254102 Co-fractionation Homo sapiens 59 WBP2NL   Affinity Capture-MS Homo sapiens 60 KLHL33   Affinity Capture-MS Homo sapiens 61 PRDX2 7001 Affinity Capture-MS Homo sapiens 62 NDUFC2 4718 Affinity Capture-MS Homo sapiens 63 DCAF4L2 138009 Affinity Capture-MS Homo sapiens 64 IRF3 3661 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 65 C2orf44   Affinity Capture-MS Homo sapiens 66 CTRL   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens View the network

Pathways in which ANKRD40 is involved

No pathways found