Gene ontology annotations for GTPBP1
Experiment description of studies that identified GTPBP1 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
6
Experiment ID
208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
7
Experiment ID
209
MISEV standards
✘
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for GTPBP1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
ATG16L1
55054
Affinity Capture-MS
Homo sapiens
2
DUSP19
Affinity Capture-MS
Homo sapiens
3
HECTD1
25831
Affinity Capture-MS
Homo sapiens
4
Gspt1
14852
Affinity Capture-MS
Mus musculus
5
UBE2H
7328
Affinity Capture-MS
Homo sapiens
6
MINK1
50488
Affinity Capture-MS
Homo sapiens
7
RAD21
5885
Affinity Capture-Western
Homo sapiens
8
MYCN
Affinity Capture-MS
Homo sapiens
9
FAM175B
23172
Affinity Capture-MS
Homo sapiens
10
KIF3A
11127
Affinity Capture-MS
Homo sapiens
11
Cit
12704
Affinity Capture-MS
Mus musculus
12
FBXL6
Affinity Capture-MS
Homo sapiens
13
TP53
7157
Affinity Capture-MS
Homo sapiens
14
EIF2S3
1968
Co-fractionation
Homo sapiens
15
CPEB1
Proximity Label-MS
Homo sapiens
16
ZEB1
Affinity Capture-MS
Homo sapiens
17
E2F4
Affinity Capture-MS
Homo sapiens
18
ISOC2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
19
NF2
4771
Affinity Capture-MS
Homo sapiens
20
RAB17
64284
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
21
CHAMP1
Affinity Capture-MS
Homo sapiens
22
CUL3
8452
Affinity Capture-MS
Homo sapiens
23
CPNE9
Affinity Capture-MS
Homo sapiens
24
CAND1
55832
Affinity Capture-MS
Homo sapiens
25
PARK2
Affinity Capture-MS
Homo sapiens
26
PTK2
5747
Proximity Label-MS
Homo sapiens
27
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
28
DDX58
23586
Affinity Capture-RNA
Homo sapiens
29
CORO1C
23603
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
30
VASP
7408
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
31
APP
351
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
32
NXF1
10482
Co-fractionation
Homo sapiens
33
UFL1
23376
Affinity Capture-MS
Homo sapiens
34
STK11
6794
Negative Genetic
Homo sapiens
35
CER1
Affinity Capture-MS
Homo sapiens
36
SNRNP70
6625
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
37
EEF2KMT
Affinity Capture-MS
Homo sapiens
38
MYC
Affinity Capture-MS
Homo sapiens
39
IRF5
Affinity Capture-MS
Homo sapiens
40
NIN
51199
Proximity Label-MS
Homo sapiens
41
PRC1
9055
Co-fractionation
Homo sapiens
42
NTRK1
4914
Affinity Capture-MS
Homo sapiens
43
UBE2O
63893
Affinity Capture-MS
Homo sapiens
44
TRIM31
Affinity Capture-MS
Homo sapiens
45
Rrbp1
Affinity Capture-MS
Mus musculus
46
NHP2L1
4809
Co-fractionation
Homo sapiens
47
COPS5
10987
Affinity Capture-MS
Homo sapiens
48
TULP3
7289
Affinity Capture-MS
Homo sapiens
49
DDRGK1
65992
Affinity Capture-MS
Homo sapiens
50
LOX
4015
Affinity Capture-MS
Homo sapiens
51
Rpl35
66489
Affinity Capture-MS
Mus musculus
52
FSCN1
6624
Affinity Capture-MS
Homo sapiens
53
Eif3e
16341
Affinity Capture-MS
Mus musculus
54
RPA3
6119
Proximity Label-MS
Homo sapiens
55
CEBPA
Protein-peptide
Homo sapiens
56
RAB27A
5873
Affinity Capture-MS
Homo sapiens
57
HDGF
3068
Affinity Capture-MS
Homo sapiens
58
MEX3C
51320
Affinity Capture-MS
Homo sapiens
59
CDC5L
988
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which GTPBP1 is involved
No pathways found