Gene ontology annotations for SLC35B2
Experiment description of studies that identified SLC35B2 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
266
MISEV standards
✘
Biophysical techniques
✔
TSG101|Alix
Enriched markers
✔
CANX|HSP90B1
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25265333
Organism
Homo sapiens
Experiment description
Quantitative Proteomic Analysis of Exosome Protein Content Changes Induced by Hepatitis B Virus in Huh-7 Cells Using SILAC Labeling and LC-MS/MS
Authors
"Zhao X, Wu Y, Duan J, Ma Y, Shen Z, Wei L, Cui X, Zhang J, Xie Y, Liu J"
Journal name
J Proteome Res
Publication year
2014
Sample
Liver cancer cells
Sample name
Huh-7 - Wild type
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
268
MISEV standards
✘
Biophysical techniques
✔
TSG101|Alix
Enriched markers
✔
CANX|HSP90B1
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25265333
Organism
Homo sapiens
Experiment description
Quantitative Proteomic Analysis of Exosome Protein Content Changes Induced by Hepatitis B Virus in Huh-7 Cells Using SILAC Labeling and LC-MS/MS
Authors
"Zhao X, Wu Y, Duan J, Ma Y, Shen Z, Wei L, Cui X, Zhang J, Xie Y, Liu J"
Journal name
J Proteome Res
Publication year
2014
Sample
Liver cancer cells
Sample name
Huh-7 - Transfected with HBx-null HBV replicon plasmids
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
8
Experiment ID
211
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
cytochrome c|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
IGROV1
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
9
Experiment ID
212
MISEV standards
✔
CEM
Biophysical techniques
✔
TSG101|Alix|EpCAM|TFRC
Enriched markers
✔
Cytochrome C|GOLGA2
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23333927
Organism
Homo sapiens
Experiment description
Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors
"Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K."
Journal name
J Proteomics
Publication year
2013
Sample
Ovarian cancer cells
Sample name
OVCAR-3
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
1.09-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for SLC35B2
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
NRG1
3084
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
2
CLDN15
Two-hybrid
Homo sapiens
3
GNAI2
2771
Affinity Capture-MS
Homo sapiens
4
GPM6A
2823
Affinity Capture-MS
Homo sapiens
5
HSP90AB2P
391634
Affinity Capture-MS
Homo sapiens
6
Tmed2
56334
Affinity Capture-MS
Mus musculus
7
LYPD3
27076
Affinity Capture-MS
Homo sapiens
8
AHSA1
10598
Affinity Capture-MS
Homo sapiens
9
SLC15A1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
10
ATP13A3
79572
Affinity Capture-MS
Homo sapiens
11
SLC39A12
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
CCDC117
Affinity Capture-MS
Homo sapiens
13
CD69
Two-hybrid
Homo sapiens
14
TP53
7157
Affinity Capture-MS
Homo sapiens
15
HSPA8
3312
Affinity Capture-MS
Homo sapiens
16
SLC39A4
55630
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
17
HSP90AB4P
664618
Affinity Capture-MS
Homo sapiens
18
RNF170
81790
Two-hybrid
Homo sapiens
19
RAMP3
Affinity Capture-MS
Homo sapiens
20
LRRC55
Affinity Capture-MS
Homo sapiens
21
TMEM248
55069
Two-hybrid
Homo sapiens
22
Bmpr1a
Affinity Capture-MS
Mus musculus
23
HTR3C
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
CMKLR1
1240
Affinity Capture-MS
Homo sapiens
25
ASGR2
Two-hybrid
Homo sapiens
26
ERGIC3
51614
Two-hybrid
Homo sapiens
27
BSCL2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
28
TSPAN15
23555
Affinity Capture-MS
Homo sapiens
29
TYROBP
Affinity Capture-MS
Homo sapiens
30
HSP90AB1
3326
Affinity Capture-MS
Homo sapiens
31
CACNG6
Affinity Capture-MS
Homo sapiens
32
SLC7A14
Affinity Capture-MS
Homo sapiens
33
HSP90AA1
3320
Affinity Capture-MS
Homo sapiens
34
BAP1
8314
Negative Genetic
Homo sapiens
35
OPRL1
4987
Affinity Capture-MS
Homo sapiens
36
PDHA1
5160
Affinity Capture-MS
Homo sapiens
37
FFAR1
Affinity Capture-MS
Homo sapiens
38
SLC22A9
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
39
EDEM2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
40
Sec24c
Affinity Capture-MS
Mus musculus
41
TOMM22
56993
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
42
STOM
2040
Affinity Capture-MS
Homo sapiens
43
SYP
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
44
SLC18A2
Affinity Capture-MS
Homo sapiens
45
ACACA
31
Negative Genetic
Homo sapiens
46
B3GAT1
Proximity Label-MS
Homo sapiens
47
EEF1A1P5
158078
Cross-Linking-MS (XL-MS)
Homo sapiens
48
GOLM1
51280
Two-hybrid
Homo sapiens
49
TMEM237
65062
Two-hybrid
Homo sapiens
50
SPPL2B
56928
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
51
CMTM5
Affinity Capture-MS
Homo sapiens
52
SLC39A5
283375
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
53
GPR182
Affinity Capture-MS
Homo sapiens
54
SLC24A3
Affinity Capture-MS
Homo sapiens
55
Ranbp2
Affinity Capture-MS
Mus musculus
56
CREB3L1
Two-hybrid
Homo sapiens
57
CDC37
11140
Affinity Capture-MS
Homo sapiens
58
SERBP1
26135
Affinity Capture-MS
Homo sapiens
59
ANXA4
307
Affinity Capture-MS
Homo sapiens
60
CRELD1
78987
Affinity Capture-MS
Homo sapiens
61
YIPF3
25844
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
62
CLTC
1213
Affinity Capture-MS
Homo sapiens
63
PBXIP1
57326
Affinity Capture-MS
Homo sapiens
64
SLC22A4
6583
Affinity Capture-MS
Homo sapiens
65
TEX29
Two-hybrid
Homo sapiens
66
SCN3B
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
67
TARS
6897
Cross-Linking-MS (XL-MS)
Homo sapiens
68
STIP1
10963
Affinity Capture-MS
Homo sapiens
69
FPR2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
70
SLC2A9
Affinity Capture-MS
Homo sapiens
71
KIAA1644
Two-hybrid
Homo sapiens
72
LPAR1
1902
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
73
SLC7A1
6541
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which SLC35B2 is involved