Gene description for Tmed2
Gene name transmembrane emp24 domain trafficking protein 2
Gene symbol Tmed2
Other names/aliases 1110032D12Rik
1810020N21Rik
Rnp24
Sid394
p24beta1
Species Mus musculus
 Database cross references - Tmed2
ExoCarta ExoCarta_56334
Vesiclepedia VP_56334
Entrez Gene 56334
UniProt Q9R0Q3  
 Tmed2 identified in exosomes derived from the following tissue/cell type
Mast cells 17486113    
 Gene ontology annotations for Tmed2
Molecular Function
    frizzled binding GO:0005109 IPI
    smoothened binding GO:0005119 IPI
    protein binding GO:0005515 IPI
Biological Process
    in utero embryonic development GO:0001701 IMP
    somitogenesis GO:0001756 IMP
    neural tube closure GO:0001843 IMP
    embryonic placenta development GO:0001892 IMP
    maternal placenta development GO:0001893 IMP
    heart looping GO:0001947 IMP
    intracellular protein transport GO:0006886 IBA
    intracellular protein transport GO:0006886 IEA
    intracellular protein transport GO:0006886 ISO
    endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888 IBA
    inflammatory response GO:0006954 IMP
    endoplasmic reticulum organization GO:0007029 IMP
    Golgi organization GO:0007030 IBA
    Golgi organization GO:0007030 ISO
    Golgi organization GO:0007030 ISS
    protein localization GO:0008104 IMP
    protein secretion GO:0009306 IMP
    positive regulation of gene expression GO:0010628 IMP
    vesicle-mediated transport GO:0016192 IEA
    somite rostral/caudal axis specification GO:0032525 IMP
    negative regulation of GTPase activity GO:0034260 ISO
    negative regulation of GTPase activity GO:0034260 ISS
    multicellular organism growth GO:0035264 IMP
    post-anal tail morphogenesis GO:0036342 IMP
    PERK-mediated unfolded protein response GO:0036499 IMP
    negative regulation of smoothened signaling pathway GO:0045879 IMP
    embryonic morphogenesis GO:0048598 IMP
    branching involved in labyrinthine layer morphogenesis GO:0060670 IMP
    labyrinthine layer blood vessel development GO:0060716 IMP
    chorion development GO:0060717 IMP
    maintenance of protein localization in organelle GO:0072595 IMP
    protein localization to plasma membrane GO:0072659 ISO
    protein localization to plasma membrane GO:0072659 ISS
    endoplasmic reticulum membrane organization GO:0090158 IMP
    negative regulation of protein localization to plasma membrane GO:1903077 IMP
    negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation GO:1903912 IMP
    allantois development GO:1905069 IMP
    regulation of SREBP signaling pathway GO:2000638 IMP
Subcellular Localization
    endoplasmic reticulum GO:0005783 IBA
    endoplasmic reticulum GO:0005783 ISO
    endoplasmic reticulum GO:0005783 ISS
    endoplasmic reticulum membrane GO:0005789 IDA
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 IBA
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 IDA
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 ISO
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 ISS
    Golgi apparatus GO:0005794 IBA
    Golgi apparatus GO:0005794 IDA
    Golgi apparatus GO:0005794 IDA
    Golgi apparatus GO:0005794 ISO
    Golgi apparatus GO:0005794 ISS
    membrane GO:0016020 ISO
    membrane GO:0016020 ISS
    COPII-coated ER to Golgi transport vesicle GO:0030134 IBA
    COPI-coated vesicle GO:0030137 ISO
    COPI-coated vesicle GO:0030137 ISS
    COPI-coated vesicle membrane GO:0030663 IEA
    Golgi cisterna membrane GO:0032580 IEA
    endoplasmic reticulum-Golgi intermediate compartment membrane GO:0033116 IEA
    zymogen granule membrane GO:0042589 ISO
    zymogen granule membrane GO:0042589 ISS
    intracellular membrane-bounded organelle GO:0043231 ISO
 Experiment description of studies that identified Tmed2 in exosomes
1
Experiment ID 15
MISEV standards
EM
Biophysical techniques
CD63
Enriched markers
Negative markers
Particle analysis
Identified molecule mrna
Identification method Microarray
PubMed ID 17486113    
Organism Mus musculus
Homo sapiens
Experiment description Exosome-mediated transfer of mRNAs and microRNAs is a novel mechanism of genetic exchange between cells.
Authors Valadi H, Ekstrom K, Bossios A, Sjostrand M, Lee JJ, Lotvall JO
Journal name NCB
Publication year 2007
Sample Mast cells
Sample name MC9
Bone marrow-derived mast cells
HMC-1
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.11-1.21 g/mL
Molecules identified in the study Protein
mRNA
miRNA
Methods used in the study Mass spectrometry [MALDI TOF]
Western blotting
Microarray
miRCURY LNA Array
 Protein-protein interactions for Tmed2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ATAD1 84896
Affinity Capture-MS Homo sapiens
2 ABCG2 9429
Affinity Capture-MS Homo sapiens
3 ATP6V1B2 526
Affinity Capture-MS Homo sapiens
4 MRPS27 23107
Affinity Capture-MS Homo sapiens
5 CLCN7 1186
Affinity Capture-MS Homo sapiens
6 NCBP1 4686
Affinity Capture-MS Homo sapiens
7 STT3A 3703
Affinity Capture-MS Homo sapiens
8 NDUFS1 4719
Affinity Capture-MS Homo sapiens
9 TMED4 222068
Affinity Capture-MS Homo sapiens
10 TMED5 50999
Affinity Capture-MS Homo sapiens
11 JPH1 56704
Affinity Capture-MS Homo sapiens
12 TMUB1  
Affinity Capture-MS Homo sapiens
13 SLC2A1 6513
Affinity Capture-MS Homo sapiens
14 C4BPA 722
Affinity Capture-MS Homo sapiens
15 RPUSD4 84881
Affinity Capture-MS Homo sapiens
16 EBP  
Affinity Capture-MS Homo sapiens
17 PRKCDBP 112464
Affinity Capture-MS Homo sapiens
18 NDUFB8 4714
Affinity Capture-MS Homo sapiens
19 NDUFA7 4701
Affinity Capture-MS Homo sapiens
20 B4GALT7 11285
Affinity Capture-MS Homo sapiens
21 VKORC1 79001
Affinity Capture-MS Homo sapiens
22 ABCD3 5825
Affinity Capture-MS Homo sapiens
23 MMADHC  
Affinity Capture-MS Homo sapiens
24 PHB 5245
Affinity Capture-MS Homo sapiens
25 ATP6V0D1 9114
Affinity Capture-MS Homo sapiens
26 INADL 10207
Affinity Capture-MS Homo sapiens
27 CHCHD6 84303
Affinity Capture-MS Homo sapiens
28 SDCBP 6386
Affinity Capture-MS Homo sapiens
29 MMGT1 93380
Affinity Capture-MS Homo sapiens
30 ATP6AP1 537
Affinity Capture-MS Homo sapiens
31 NDUFS5 4725
Affinity Capture-MS Homo sapiens
32 CYBRD1 79901
Affinity Capture-MS Homo sapiens
33 STOML2 30968
Affinity Capture-MS Homo sapiens
34 GOLIM4 27333
Affinity Capture-MS Homo sapiens
35 BRPF1  
Affinity Capture-MS Homo sapiens
36 PHF20L1  
Affinity Capture-MS Homo sapiens
37 SCFD1 23256
Affinity Capture-MS Homo sapiens
38 PRDX5 25824
Affinity Capture-MS Homo sapiens
39 NDUFB7 4713
Affinity Capture-MS Homo sapiens
40 PGAM5 192111
Affinity Capture-MS Homo sapiens
41 STOM 2040
Affinity Capture-MS Homo sapiens
42 PLD1 5337
Affinity Capture-MS Homo sapiens
43 SRRT 51593
Affinity Capture-MS Homo sapiens
44 RRAS2 22800
Affinity Capture-MS Homo sapiens
45 TMEM43 79188
Affinity Capture-MS Homo sapiens
46 UBAC2 337867
Affinity Capture-MS Homo sapiens
47 FLOT1 10211
Affinity Capture-MS Homo sapiens
48 LEMD2 221496
Affinity Capture-MS Homo sapiens
49 TRPM7 54822
Affinity Capture-MS Homo sapiens
50 C6orf120  
Affinity Capture-MS Homo sapiens
51 RPN1 6184
Affinity Capture-MS Homo sapiens
52 KIAA0556  
Affinity Capture-MS Homo sapiens
53 PRSS21  
Affinity Capture-MS Homo sapiens
54 ATP2C1 27032
Affinity Capture-MS Homo sapiens
55 FLOT2 2319
Affinity Capture-MS Homo sapiens
56 VDAC2 7417
Affinity Capture-MS Homo sapiens
57 TMED1 11018
Affinity Capture-MS Homo sapiens
58 GPRC5A 9052
Affinity Capture-MS Homo sapiens
59 SLC35E1 79939
Affinity Capture-MS Homo sapiens
60 CCDC115 84317
Affinity Capture-MS Homo sapiens
61 RBBP6 5930
Affinity Capture-MS Homo sapiens
62 KIF1B 23095
Affinity Capture-MS Homo sapiens
63 COX5B 1329
Affinity Capture-MS Homo sapiens
64 TMED9 54732
Affinity Capture-MS Homo sapiens
65 RPN2 6185
Affinity Capture-MS Homo sapiens
66 VAMP3 9341
Affinity Capture-MS Homo sapiens
67 SLC7A5 8140
Affinity Capture-MS Homo sapiens
68 CCDC127  
Affinity Capture-MS Homo sapiens
69 FKBP5 2289
Affinity Capture-MS Homo sapiens
70 SOAT1 6646
Affinity Capture-MS Homo sapiens
71 CORO2A  
Affinity Capture-MS Homo sapiens
72 RFT1 91869
Affinity Capture-MS Homo sapiens
73 MYOF 26509
Affinity Capture-MS Homo sapiens
74 ATP6V1A 523
Affinity Capture-MS Homo sapiens
75 TRIM27  
Affinity Capture-MS Homo sapiens
76 KTN1 3895
Affinity Capture-MS Homo sapiens
77 VDAC1 7416
Affinity Capture-MS Homo sapiens
78 ATP6V0A1 535
Affinity Capture-MS Homo sapiens
79 KIDINS220 57498
Affinity Capture-MS Homo sapiens
80 CD44 960
Affinity Capture-MS Homo sapiens
81 MLEC 9761
Affinity Capture-MS Homo sapiens
82 GOLGB1 2804
Affinity Capture-MS Homo sapiens
83 PA2G4 5036
Affinity Capture-MS Homo sapiens
84 MBOAT7 79143
Affinity Capture-MS Homo sapiens
85 PHB2 11331
Affinity Capture-MS Homo sapiens
86 TMED10 10972
Affinity Capture-MS Homo sapiens
87 SLC38A2 54407
Affinity Capture-MS Homo sapiens
88 ERLIN1 10613
Affinity Capture-MS Homo sapiens
89 GOSR1 9527
Affinity Capture-MS Homo sapiens
90 XPR1 9213
Affinity Capture-MS Homo sapiens
91 SLC39A7 7922
Affinity Capture-MS Homo sapiens
92 ZZEF1 23140
Affinity Capture-MS Homo sapiens
93 SLC35B2 347734
Affinity Capture-MS Homo sapiens
94 ERLIN2 11160
Affinity Capture-MS Homo sapiens
95 NDUFA12 55967
Affinity Capture-MS Homo sapiens
96 PTDSS1 9791
Affinity Capture-MS Homo sapiens
97 CAV1 857
Affinity Capture-MS Homo sapiens
98 ATP2A2 488
Affinity Capture-MS Homo sapiens
99 KIAA1715 80856
Affinity Capture-MS Homo sapiens
100 ATP6V1F 9296
Affinity Capture-MS Homo sapiens
101 RABL3 285282
Affinity Capture-MS Homo sapiens
102 OSBPL3 26031
Affinity Capture-MS Homo sapiens
103 NDUFS8 4728
Affinity Capture-MS Homo sapiens
104 NDUFA2 4695
Affinity Capture-MS Homo sapiens
105 IST1 9798
Affinity Capture-MS Homo sapiens
106 TMED3 23423
Affinity Capture-MS Homo sapiens
107 LAMB3 3914
Affinity Capture-MS Homo sapiens
108 TMEM199  
Affinity Capture-MS Homo sapiens
109 TMED7 51014
Affinity Capture-MS Homo sapiens
110 STT3B 201595
Affinity Capture-MS Homo sapiens
111 TAP1 6890
Affinity Capture-MS Homo sapiens
112 CKAP4 10970
Affinity Capture-MS Homo sapiens
113 PTRF 284119
Affinity Capture-MS Homo sapiens
114 RBCK1  
Affinity Capture-MS Homo sapiens
115 NVL  
Affinity Capture-MS Homo sapiens
116 NDUFB4 4710
Affinity Capture-MS Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here