Experiment description of studies that identified RPUSD4 in exosomes

1 Experiment ID 237 MISEV standards ✔ EM Biophysical techniques ✔ TSG101|Alix|HSC70|GAPDH Enriched markers ✔ HSP90B1 Negative markers ✔ qNano Particle analysis Identified molecule mRNA Identification method RNA Sequencing PubMed ID 26054723     Organism Homo sapiens Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N Journal name Carcinogenesis Publication year 2015 Sample Hepatocytes Sample name MIHA Isolation/purification methods Differential centrifugation Filtration Ultracentrifugation Sucrose density gradient Flotation density 1.13-1.19 g/mL Molecules identified in the study Protein RNA Methods used in the study Western blotting Mass spectrometry RNA Sequencing

Protein-protein interactions for RPUSD4

Protein Interactor ExoCarta ID Identification method PubMed Species 1 NUPL2 11097 Affinity Capture-MS Homo sapiens 2 RIT1 6016 Negative Genetic Homo sapiens 3 AFG3L2 10939 Proximity Label-MS Homo sapiens 4 HNRNPC 3183 Affinity Capture-MS Homo sapiens 5 Tmed2 56334 Affinity Capture-MS Mus musculus 6 MRPL48   Proximity Label-MS Homo sapiens 7 Cul1 26965 Affinity Capture-MS Mus musculus 8 THEM4   Proximity Label-MS Homo sapiens 9 ATP5J2-PTCD1   Proximity Label-MS Homo sapiens 10 CCL3   Affinity Capture-MS Homo sapiens 11 SLIRP 81892 Proximity Label-MS Homo sapiens 12 NDUFS1 4719 Proximity Label-MS Homo sapiens 13 MRPS30 10884 Proximity Label-MS Homo sapiens 14 TRMT61B   Proximity Label-MS Homo sapiens 15 MRPL17   Proximity Label-MS Homo sapiens 16 ATE1 11101 Affinity Capture-MS Homo sapiens 17 ANGEL2 90806 Proximity Label-MS Homo sapiens 18 GTPBP10   Proximity Label-MS Homo sapiens 19 PYCR1 5831 Proximity Label-MS Homo sapiens 20 PDK3 5165 Proximity Label-MS Homo sapiens 21 TRUB2   Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 22 Chmp4b 75608 Affinity Capture-MS Mus musculus 23 NGRN   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 24 MRPL24   Proximity Label-MS Homo sapiens 25 MRPL37 51253 Proximity Label-MS Homo sapiens 26 ETFB 2109 Proximity Label-MS Homo sapiens 27 NDUFS7 374291 Proximity Label-MS Homo sapiens 28 MRPL50 54534 Proximity Label-MS Homo sapiens 29 MRPL23 6150 Proximity Label-MS Homo sapiens 30 PDHB 5162 Proximity Label-MS Homo sapiens 31 MRPL49 740 Proximity Label-MS Homo sapiens 32 MRPS27 23107 Proximity Label-MS Homo sapiens 33 PDE12 201626 Proximity Label-MS Homo sapiens 34 NDUFS2 4720 Proximity Label-MS Homo sapiens 35 SUPV3L1 6832 Proximity Label-MS Homo sapiens 36 HNRNPUL2 221092 Affinity Capture-MS Homo sapiens 37 LRPPRC 10128 Proximity Label-MS Homo sapiens Proximity Label-MS Homo sapiens 38 RNH1 6050 Affinity Capture-MS Homo sapiens 39 KBTBD6   Affinity Capture-MS Homo sapiens 40 XRCC1 7515 Affinity Capture-MS Homo sapiens 41 IGF2BP3 10643 Affinity Capture-MS Homo sapiens 42 MRPL20 55052 Proximity Label-MS Homo sapiens 43 NDUFS3 4722 Proximity Label-MS Homo sapiens 44 OGDH 4967 Proximity Label-MS Homo sapiens 45 PRDX3 10935 Proximity Label-MS Homo sapiens 46 IARS2 55699 Proximity Label-MS Homo sapiens 47 FHL3 2275 Proximity Label-MS Homo sapiens 48 NDUFA7 4701 Proximity Label-MS Homo sapiens 49 HARS2 23438 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 50 MRPS5 64969 Proximity Label-MS Homo sapiens 51 YARS2   Affinity Capture-MS Homo sapiens 52 HINT2 84681 Proximity Label-MS Homo sapiens 53 MRPS23 51649 Proximity Label-MS Homo sapiens 54 MRPS24 64951 Proximity Label-MS Homo sapiens 55 MRPL12 6182 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens 56 FBXW8 26259 Affinity Capture-MS Homo sapiens 57 MRPL21 219927 Proximity Label-MS Homo sapiens 58 OBSL1 23363 Affinity Capture-MS Homo sapiens 59 MRPS26 64949 Proximity Label-MS Homo sapiens Proximity Label-MS Homo sapiens 60 MALSU1   Affinity Capture-MS Homo sapiens 61 ACOT2 10965 Proximity Label-MS Homo sapiens 62 PTCD1 26024 Affinity Capture-MS Homo sapiens 63 NNT 23530 Proximity Label-MS Homo sapiens 64 HINFP   Two-hybrid Homo sapiens 65 ERAL1   Proximity Label-MS Homo sapiens 66 Ubr5   Affinity Capture-MS Mus musculus 67 MRPL39 54148 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens 68 POLRMT 5442 Proximity Label-MS Homo sapiens 69 NDUFV1 4723 Proximity Label-MS Homo sapiens 70 ATG16L1 55054 Affinity Capture-MS Homo sapiens 71 ETFA 2108 Proximity Label-MS Homo sapiens 72 PHB 5245 Proximity Label-MS Homo sapiens 73 ATP5H 10476 Proximity Label-MS Homo sapiens 74 POTEE 445582 Proximity Label-MS Homo sapiens 75 BCS1L 617 Proximity Label-MS Homo sapiens 76 MYCN   Affinity Capture-MS Homo sapiens 77 MRPL4 51073 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens 78 FASTKD2   Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 79 NME4 4833 Proximity Label-MS Homo sapiens 80 NDUFA6   Proximity Label-MS Homo sapiens 81 MTIF2 4528 Proximity Label-MS Homo sapiens 82 MRPL47 57129 Proximity Label-MS Homo sapiens 83 FAM120A 23196 Affinity Capture-MS Homo sapiens 84 MTERF3   Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 85 PEX7   Affinity Capture-MS Homo sapiens 86 Tmed10 68581 Affinity Capture-MS Mus musculus 87 NOTCH2 4853 Affinity Capture-MS Homo sapiens 88 MDH2 4191 Proximity Label-MS Homo sapiens 89 STOML2 30968 Proximity Label-MS Homo sapiens 90 MRPL38   Proximity Label-MS Homo sapiens 91 ALAS1   Proximity Label-MS Homo sapiens 92 CAMK2A 815 Affinity Capture-MS Homo sapiens 93 EIF2AK2 5610 Proximity Label-MS Homo sapiens 94 MRPS25 64432 Proximity Label-MS Homo sapiens 95 MRPS33   Proximity Label-MS Homo sapiens 96 C6orf203   Proximity Label-MS Homo sapiens 97 NDUFS4 4724 Proximity Label-MS Homo sapiens 98 IKBIP 121457 Co-fractionation Homo sapiens 99 FASTKD5   Proximity Label-MS Homo sapiens 100 MRPL45 84311 Proximity Label-MS Homo sapiens 101 MRPS34 65993 Proximity Label-MS Homo sapiens 102 CENPV 201161 Proximity Label-MS Homo sapiens 103 SRSF3 6428 Affinity Capture-MS Homo sapiens 104 YBX2 51087 Affinity Capture-MS Homo sapiens 105 ATPAF1   Proximity Label-MS Homo sapiens 106 PAM16   Proximity Label-MS Homo sapiens 107 TMED4 222068 Affinity Capture-MS Homo sapiens 108 PTCD3 55037 Proximity Label-MS Homo sapiens 109 NDUFS8 4728 Proximity Label-MS Homo sapiens 110 MMAB 326625 Proximity Label-MS Homo sapiens 111 MRPL51 51258 Affinity Capture-MS Homo sapiens 112 MRPS6   Proximity Label-MS Homo sapiens 113 SYNCRIP 10492 Co-fractionation Homo sapiens 114 PNMA2   Affinity Capture-MS Homo sapiens 115 NDUFA2 4695 Proximity Label-MS Homo sapiens 116 C10orf2 56652 Proximity Label-MS Homo sapiens 117 CYC1 1537 Co-fractionation Homo sapiens 118 MRPL3   Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 119 DBT 1629 Proximity Label-MS Homo sapiens 120 AARS2   Proximity Label-MS Homo sapiens Proximity Label-MS Homo sapiens 121 MRPL11 65003 Proximity Label-MS Homo sapiens 122 NIPSNAP1 8508 Proximity Label-MS Homo sapiens 123 ATP5B 506 Proximity Label-MS Homo sapiens 124 PIPSL 266971 Affinity Capture-MS Homo sapiens 125 MRPL41 64975 Proximity Label-MS Homo sapiens 126 HNRNPDL 9987 Proximity Label-MS Homo sapiens 127 IMMT 10989 Proximity Label-MS Homo sapiens 128 MRPL44   Proximity Label-MS Homo sapiens 129 ACAT1 38 Proximity Label-MS Homo sapiens 130 MRPL40 64976 Proximity Label-MS Homo sapiens 131 WBSCR16   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 132 MAP7 9053 Affinity Capture-MS Homo sapiens 133 NDUFV3 4731 Proximity Label-MS Homo sapiens 134 MRPS12   Proximity Label-MS Homo sapiens 135 DAP3 7818 Proximity Label-MS Homo sapiens 136 TRMT10C 54931 Proximity Label-MS Homo sapiens 137 PNPT1 87178 Proximity Label-MS Homo sapiens 138 Cct3 12462 Affinity Capture-MS Mus musculus 139 NDUFA9 4704 Proximity Label-MS Homo sapiens 140 NDUFV2 4729 Proximity Label-MS Homo sapiens 141 LETM1 3954 Proximity Label-MS Homo sapiens 142 MRPS7 51081 Proximity Label-MS Homo sapiens 143 MRPL9 65005 Proximity Label-MS Homo sapiens 144 MRPS14   Proximity Label-MS Homo sapiens 145 NFS1 9054 Proximity Label-MS Homo sapiens 146 ATP5F1 515 Proximity Label-MS Homo sapiens 147 MRPL42   Proximity Label-MS Homo sapiens 148 EGFR 1956 Negative Genetic Homo sapiens 149 HSD17B10 3028 Proximity Label-MS Homo sapiens 150 ELAC2 60528 Proximity Label-MS Homo sapiens 151 GADD45GIP1   Proximity Label-MS Homo sapiens 152 DHX30 22907 Proximity Label-MS Homo sapiens 153 VARS2   Proximity Label-MS Homo sapiens 154 PYCR2 29920 Proximity Label-MS Homo sapiens 155 KBTBD7   Affinity Capture-MS Homo sapiens 156 ECHS1 1892 Proximity Label-MS Homo sapiens 157 NXF1 10482 Affinity Capture-RNA Homo sapiens 158 MRPL15 29088 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 159 KLHL22 84861 Affinity Capture-MS Homo sapiens 160 C12orf65   Proximity Label-MS Homo sapiens 161 PRR3   Affinity Capture-MS Homo sapiens 162 UBR1 197131 Affinity Capture-MS Homo sapiens 163 RBM42   Affinity Capture-MS Homo sapiens 164 MYC   Affinity Capture-MS Homo sapiens 165 TACO1   Proximity Label-MS Homo sapiens 166 DLST 1743 Proximity Label-MS Homo sapiens 167 PREPL 9581 Proximity Label-MS Homo sapiens 168 HSDL2 84263 Proximity Label-MS Homo sapiens 169 CLPX 10845 Proximity Label-MS Homo sapiens 170 ACAD9 28976 Proximity Label-MS Homo sapiens 171 MRPS36 92259 Proximity Label-MS Homo sapiens 172 VWA8 23078 Proximity Label-MS Homo sapiens 173 HSPD1 3329 Proximity Label-MS Homo sapiens 174 HSPA9 3313 Proximity Label-MS Homo sapiens 175 DLAT 1737 Proximity Label-MS Homo sapiens 176 METTL15   Proximity Label-MS Homo sapiens 177 CAMK2G 818 Affinity Capture-MS Homo sapiens 178 RBMS2 5939 Affinity Capture-MS Homo sapiens 179 RBM11   Proximity Label-MS Homo sapiens 180 PPIF 10105 Proximity Label-MS Homo sapiens 181 C17orf70   Affinity Capture-MS Homo sapiens 182 ZRANB1 54764 Affinity Capture-MS Homo sapiens 183 NDUFAF2   Proximity Label-MS Homo sapiens 184 FTL 2512 Affinity Capture-MS Homo sapiens 185 VWCE   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 186 CS 1431 Proximity Label-MS Homo sapiens Proximity Label-MS Homo sapiens 187 GLS 2744 Proximity Label-MS Homo sapiens 188 ATP5J 522 Proximity Label-MS Homo sapiens 189 TSFM 10102 Proximity Label-MS Homo sapiens 190 RBM45   Affinity Capture-MS Homo sapiens 191 MRPS2 51116 Proximity Label-MS Homo sapiens 192 MRPS9 64965 Proximity Label-MS Homo sapiens 193 MRPL22   Proximity Label-MS Homo sapiens 194 MCAT 27349 Affinity Capture-MS Homo sapiens 195 TP53 7157 Synthetic Growth Defect Homo sapiens Negative Genetic Homo sapiens 196 ICT1 3396 Proximity Label-MS Homo sapiens 197 MRPS28   Proximity Label-MS Homo sapiens 198 LARS2 23395 Proximity Label-MS Homo sapiens 199 ABHD10 55347 Proximity Label-MS Homo sapiens 200 MRPS18C   Proximity Label-MS Homo sapiens 201 MRPL53   Proximity Label-MS Homo sapiens 202 MRPL43 84545 Proximity Label-MS Homo sapiens 203 PDHA1 5160 Proximity Label-MS Homo sapiens 204 MRPS17 51373 Proximity Label-MS Homo sapiens 205 DNAJA3 9093 Proximity Label-MS Homo sapiens 206 MRPS35 60488 Proximity Label-MS Homo sapiens 207 MRPL1   Proximity Label-MS Homo sapiens 208 NDUFA12 55967 Proximity Label-MS Homo sapiens 209 GRPEL1 80273 Proximity Label-MS Homo sapiens 210 COX8A   Proximity Label-MS Homo sapiens 211 MRPS10 55173 Proximity Label-MS Homo sapiens 212 NUDT19 390916 Proximity Label-MS Homo sapiens 213 SHMT2 6472 Proximity Label-MS Homo sapiens 214 KCNE3   Affinity Capture-MS Homo sapiens 215 NDUFS6   Proximity Label-MS Homo sapiens 216 GUF1   Proximity Label-MS Homo sapiens 217 NDUFA5 4698 Proximity Label-MS Homo sapiens 218 MRPS18B 28973 Proximity Label-MS Homo sapiens 219 ATP5D 513 Proximity Label-MS Homo sapiens 220 MOV10 4343 Affinity Capture-RNA Homo sapiens Affinity Capture-MS Homo sapiens 221 RNMTL1   Co-fractionation Homo sapiens Proximity Label-MS Homo sapiens 222 MRPL13   Proximity Label-MS Homo sapiens 223 ACOT1 641371 Proximity Label-MS Homo sapiens 224 MRPL46   Proximity Label-MS Homo sapiens 225 MGME1   Proximity Label-MS Homo sapiens 226 MRPL19 9801 Proximity Label-MS Homo sapiens 227 SSSCA1 10534 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 228 RPUSD3   Affinity Capture-MS Homo sapiens 229 MRPS16   Proximity Label-MS Homo sapiens 230 GRSF1 2926 Proximity Label-MS Homo sapiens 231 TMED7 51014 Affinity Capture-MS Homo sapiens 232 NDUFAF4 29078 Proximity Label-MS Homo sapiens 233 QRSL1   Proximity Label-MS Homo sapiens 234 HNRNPU 3192 Affinity Capture-MS Homo sapiens 235 MRPL2 51069 Proximity Label-MS Homo sapiens 236 MRPL55   Proximity Label-MS Homo sapiens 237 MRPS31   Proximity Label-MS Homo sapiens 238 C17orf80 55028 Proximity Label-MS Homo sapiens 239 METTL17   Proximity Label-MS Homo sapiens 240 MRPS22 56945 Proximity Label-MS Homo sapiens 241 HNRNPL 3191 Proximity Label-MS Homo sapiens 242 SUCLA2 8803 Proximity Label-MS Homo sapiens 243 MRPL28 10573 Proximity Label-MS Homo sapiens 244 KCTD5 54442 Affinity Capture-MS Homo sapiens 245 MRPS18A   Proximity Label-MS Homo sapiens 246 DDX28   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 247 TIMM44 10469 Proximity Label-MS Homo sapiens View the network

Pathways in which RPUSD4 is involved

No pathways found