Gene description for NDUFAF4
Gene name NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
Gene symbol NDUFAF4
Other names/aliases C6orf66
HRPAP20
HSPC125
My013
bA22L21.1
Species Homo sapiens
 Database cross references - NDUFAF4
ExoCarta ExoCarta_29078
Vesiclepedia VP_29078
Entrez Gene 29078
HGNC 21034
MIM 611776
UniProt Q9P032  
 NDUFAF4 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
 Gene ontology annotations for NDUFAF4
Molecular Function
    protein binding GO:0005515 IPI
    calmodulin binding GO:0005516 IEA
Biological Process
    positive regulation of cell population proliferation GO:0008284 IEA
    mitochondrial respiratory chain complex I assembly GO:0032981 IBA
    mitochondrial respiratory chain complex I assembly GO:0032981 IMP
    negative regulation of apoptotic process GO:0043066 IEA
    defense response to virus GO:0051607 IMP
Subcellular Localization
    mitochondrion GO:0005739 HTP
    mitochondrion GO:0005739 IBA
    mitochondrion GO:0005739 IDA
    mitochondrial inner membrane GO:0005743 TAS
    cytosol GO:0005829 IDA
    mitochondrial membrane GO:0031966 IDA
 Experiment description of studies that identified NDUFAF4 in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for NDUFAF4
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 UBE2H 7328
Affinity Capture-MS Homo sapiens
2 RAMP3  
Affinity Capture-MS Homo sapiens
3 SLIRP 81892
Proximity Label-MS Homo sapiens
4 FOXA1  
Affinity Capture-MS Homo sapiens
5 MAGEA3  
Affinity Capture-MS Homo sapiens
6 DHCR24 1718
Affinity Capture-MS Homo sapiens
7 DUSP8  
Affinity Capture-MS Homo sapiens
8 RPA2 6118
Proximity Label-MS Homo sapiens
9 TRUB2  
Proximity Label-MS Homo sapiens
10 MTG2  
Proximity Label-MS Homo sapiens
11 NGRN  
Proximity Label-MS Homo sapiens
12 CHCHD1  
Proximity Label-MS Homo sapiens
13 EYA2  
Affinity Capture-MS Homo sapiens
14 GPR182  
Affinity Capture-MS Homo sapiens
15 NDUFB1 4707
Affinity Capture-MS Homo sapiens
16 RPUSD4 84881
Proximity Label-MS Homo sapiens
17 PTPN1 5770
Affinity Capture-MS Homo sapiens
18 WDR26 80232
Affinity Capture-MS Homo sapiens
19 DNAJC15  
Proximity Label-MS Homo sapiens
20 MTRF1  
Proximity Label-MS Homo sapiens
21 GFM2 84340
Proximity Label-MS Homo sapiens
22 CCDC90B  
Proximity Label-MS Homo sapiens
23 LRPPRC 10128
Proximity Label-MS Homo sapiens
24 CHCHD4  
Co-fractionation Homo sapiens
25 HYAL1 3373
Affinity Capture-MS Homo sapiens
26 IGF2BP3 10643
Co-fractionation Homo sapiens
27 NDUFS3 4722
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
28 CRYZ 1429
Proximity Label-MS Homo sapiens
29 TFAM 7019
Proximity Label-MS Homo sapiens
30 PMPCA 23203
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
31 COQ9  
Affinity Capture-MS Homo sapiens
32 C8orf82  
Proximity Label-MS Homo sapiens
33 TIMMDC1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 HINT2 84681
Proximity Label-MS Homo sapiens
35 NDUFA5 4698
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
36 POU5F1  
Affinity Capture-MS Homo sapiens
37 MRPS26 64949
Proximity Label-MS Homo sapiens
38 SURF1  
Proximity Label-MS Homo sapiens
39 EXD2  
Proximity Label-MS Homo sapiens
40 HTRA2 27429
Affinity Capture-MS Homo sapiens
41 NDUFAF1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 PMPCB 9512
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
43 TACO1  
Proximity Label-MS Homo sapiens
44 FASTKD2  
Proximity Label-MS Homo sapiens
45 VWA8 23078
Proximity Label-MS Homo sapiens
46 NDUFS5 4725
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
47 MTERF3  
Proximity Label-MS Homo sapiens
48 LAMTOR1 55004
Proximity Label-MS Homo sapiens
49 PITRM1 10531
Affinity Capture-MS Homo sapiens
50 MDH2 4191
Proximity Label-MS Homo sapiens
51 APOO 79135
Proximity Label-MS Homo sapiens
52 C6orf203  
Proximity Label-MS Homo sapiens
53 COX15 1355
Proximity Label-MS Homo sapiens
54 FASTKD5  
Proximity Label-MS Homo sapiens
55 ABCE1 6059
Affinity Capture-MS Homo sapiens
56 CXCR4 7852
Affinity Capture-MS Homo sapiens
57 ACIN1 22985
Co-fractionation Homo sapiens
58 TUFM 7284
Proximity Label-MS Homo sapiens
59 DNAJB8  
Affinity Capture-MS Homo sapiens
60 HSCB 150274
Proximity Label-MS Homo sapiens
61 NDUFAF5  
Affinity Capture-MS Homo sapiens
62 CCDC109B 55013
Proximity Label-MS Homo sapiens
63 POLDIP2 26073
Affinity Capture-MS Homo sapiens
64 TBRG4 9238
Proximity Label-MS Homo sapiens
65 MCU 90550
Proximity Label-MS Homo sapiens
66 DHX9 1660
Co-fractionation Homo sapiens
67 MRPL11 65003
Proximity Label-MS Homo sapiens
68 MTRF1L  
Proximity Label-MS Homo sapiens
69 DNAJC30  
Proximity Label-MS Homo sapiens
70 TMEM70  
Proximity Label-MS Homo sapiens
71 NDUFAF3 25915
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
72 COX4I1 1327
Proximity Label-MS Homo sapiens
73 NDUFB5 4711
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
74 ECH1 1891
Affinity Capture-MS Homo sapiens
75 C15orf48  
Affinity Capture-MS Homo sapiens
76 OTC 5009
Proximity Label-MS Homo sapiens
77 MRRF  
Proximity Label-MS Homo sapiens
78 TMEM126B 55863
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
79 AIFM1 9131
Proximity Label-MS Homo sapiens
80 MRPS12  
Proximity Label-MS Homo sapiens
81 LRRC61 65999
Affinity Capture-MS Homo sapiens
82 MTIF2 4528
Proximity Label-MS Homo sapiens
83 NDUFB10 4716
Affinity Capture-MS Homo sapiens
84 NDUFA13 51079
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
85 CLPP 8192
Proximity Label-MS Homo sapiens
86 MTIF3  
Proximity Label-MS Homo sapiens
87 C2orf47  
Affinity Capture-MS Homo sapiens
88 ATG12  
Proximity Label-MS Homo sapiens
89 RMND1 55005
Proximity Label-MS Homo sapiens
90 FAHD1 81889
Affinity Capture-MS Homo sapiens
91 ARF6 382
Proximity Label-MS Homo sapiens
92 BAP1 8314
Negative Genetic Homo sapiens
93 RIPK4  
Affinity Capture-MS Homo sapiens
94 DUSP6 1848
Affinity Capture-MS Homo sapiens
95 C17orf80 55028
Proximity Label-MS Homo sapiens
96 SYP  
Affinity Capture-MS Homo sapiens
97 C12orf65  
Proximity Label-MS Homo sapiens
98 MYCN  
Affinity Capture-MS Homo sapiens
99 MAPK6  
Affinity Capture-MS Homo sapiens
100 MLLT3 4300
Affinity Capture-MS Homo sapiens
101 MTG1  
Proximity Label-MS Homo sapiens
102 NDUFB3 4709
Affinity Capture-MS Homo sapiens
103 RPA3 6119
Proximity Label-MS Homo sapiens
104 ATP5E 514
Affinity Capture-MS Homo sapiens
105 ACAD9 28976
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
106 FEM1A  
Affinity Capture-MS Homo sapiens
107 NDUFA3  
Affinity Capture-MS Homo sapiens
108 CTNNA1 1495
Proximity Label-MS Homo sapiens
109 SPDYE4  
Affinity Capture-MS Homo sapiens
110 NDUFC2 4718
Affinity Capture-MS Homo sapiens
111 METTL15  
Proximity Label-MS Homo sapiens
112 FFAR1  
Affinity Capture-MS Homo sapiens
113 AKAP1 8165
Proximity Label-MS Homo sapiens
114 MCUR1 63933
Proximity Label-MS Homo sapiens
115 NDUFS2 4720
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
116 DHX15 1665
Co-fractionation Homo sapiens
117 DNAJC28  
Proximity Label-MS Homo sapiens
118 CS 1431
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
119 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
120 PHB2 11331
Proximity Label-MS Homo sapiens
121 CRYGS 1427
Affinity Capture-MS Homo sapiens
122 STK16 8576
Affinity Capture-MS Homo sapiens
123 TSFM 10102
Proximity Label-MS Homo sapiens
124 AUH 549
Proximity Label-MS Homo sapiens
125 DNAJC19 131118
Proximity Label-MS Homo sapiens
126 ICT1 3396
Proximity Label-MS Homo sapiens
127 LONP1 9361
Proximity Label-MS Homo sapiens
128 BCKDHA 593
Affinity Capture-MS Homo sapiens
129 PDHA1 5160
Proximity Label-MS Homo sapiens
130 DNAJA3 9093
Proximity Label-MS Homo sapiens
131 NDUFS7 374291
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
132 COX8A  
Proximity Label-MS Homo sapiens
133 NUDT19 390916
Affinity Capture-MS Homo sapiens
134 C21orf33  
Proximity Label-MS Homo sapiens
135 SSBP1 6742
Proximity Label-MS Homo sapiens
136 FASTKD3  
Proximity Label-MS Homo sapiens
137 NDUFS8 4728
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
138 GFM1 85476
Proximity Label-MS Homo sapiens
139 AARS2  
Proximity Label-MS Homo sapiens
140 SPPL2B 56928
Affinity Capture-MS Homo sapiens
141 C19orf52  
Proximity Label-MS Homo sapiens
142 SLC25A51  
Proximity Label-MS Homo sapiens
143 RPUSD3  
Proximity Label-MS Homo sapiens
144 HNRNPF 3185
Co-fractionation Homo sapiens
145 GRSF1 2926
Proximity Label-MS Homo sapiens
146 C1QBP 708
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
147 NDUFAF4 29078
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
148 ATP5C1 509
Affinity Capture-MS Homo sapiens
149 C9orf72  
Affinity Capture-MS Homo sapiens
150 METTL17  
Proximity Label-MS Homo sapiens
151 ND4 4538
Affinity Capture-MS Homo sapiens
152 ECSIT 51295
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
153 S1PR4  
Affinity Capture-MS Homo sapiens
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