Gene description for MRPL4
Gene name mitochondrial ribosomal protein L4
Gene symbol MRPL4
Other names/aliases CGI-28
L4mt
Species Homo sapiens
 Database cross references - MRPL4
ExoCarta ExoCarta_51073
Vesiclepedia VP_51073
Entrez Gene 51073
HGNC 14276
MIM 611823
UniProt Q9BYD3  
 MRPL4 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
 Gene ontology annotations for MRPL4
Molecular Function
    RNA binding GO:0003723 HDA
    structural constituent of ribosome GO:0003735 IBA
    protein binding GO:0005515 IPI
Biological Process
    mitochondrial translation GO:0032543 NAS
Subcellular Localization
    mitochondrion GO:0005739 HTP
    mitochondrion GO:0005739 IDA
    mitochondrial inner membrane GO:0005743 NAS
    mitochondrial inner membrane GO:0005743 TAS
    mitochondrial large ribosomal subunit GO:0005762 IDA
    mitochondrial large ribosomal subunit GO:0005762 NAS
 Experiment description of studies that identified MRPL4 in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for MRPL4
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 CFAP20 29105
Affinity Capture-MS Homo sapiens
2 UBE2H 7328
Affinity Capture-MS Homo sapiens
3 RIT1 6016
Negative Genetic Homo sapiens
4 ZMYND19  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 SLIRP 81892
Proximity Label-MS Homo sapiens
6 H1FNT  
Affinity Capture-MS Homo sapiens
7 MRPL48  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 SPRTN  
Affinity Capture-MS Homo sapiens
9 ZNF346  
Affinity Capture-MS Homo sapiens
10 COX15 1355
Proximity Label-MS Homo sapiens
11 MRPL33  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 TRUB2  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
13 POLG  
Affinity Capture-MS Homo sapiens
14 MTG2  
Proximity Label-MS Homo sapiens
15 NGRN  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
16 CHCHD1  
Proximity Label-MS Homo sapiens
17 MRPL10 124995
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
18 MRPL27 51264
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
19 CSNK2A1 1457
Biochemical Activity Homo sapiens
20 XRN2 22803
Two-hybrid Homo sapiens
21 CAND1 55832
Affinity Capture-MS Homo sapiens
22 HNRNPR 10236
Co-fractionation Homo sapiens
23 RPUSD4 84881
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 MRPL49 740
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 WDR26 80232
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
26 ZSWIM8 23053
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 DNAJC15  
Proximity Label-MS Homo sapiens
28 MTRF1  
Proximity Label-MS Homo sapiens
29 GFM2 84340
Proximity Label-MS Homo sapiens
30 CCDC90B  
Proximity Label-MS Homo sapiens
31 APEX1 328
Affinity Capture-RNA Homo sapiens
32 RPS18 6222
Co-fractionation Homo sapiens
33 KRTAP4-12  
Two-hybrid Homo sapiens
34 MRPL20 55052
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
35 MCU 90550
Proximity Label-MS Homo sapiens
36 TFAM 7019
Proximity Label-MS Homo sapiens
37 PMPCA 23203
Proximity Label-MS Homo sapiens
38 RANBP10 57610
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
39 MRPL23 6150
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
40 Ints4  
Affinity Capture-MS Mus musculus
41 PRC1 9055
Affinity Capture-MS Homo sapiens
42 HINT2 84681
Proximity Label-MS Homo sapiens
43 DUSP11  
Affinity Capture-MS Homo sapiens
44 MRPL12 6182
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
45 SLC25A12 8604
Proximity Label-MS Homo sapiens
46 KLF15  
Affinity Capture-MS Homo sapiens
47 MRPL57  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
48 AMER1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
49 MRPS26 64949
Proximity Label-MS Homo sapiens
50 SURF1  
Proximity Label-MS Homo sapiens
51 TRA2A 29896
Affinity Capture-MS Homo sapiens
52 PTCD1 26024
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
53 EXD2  
Proximity Label-MS Homo sapiens
54 RC3H1 149041
Affinity Capture-MS Homo sapiens
55 TEX19  
Affinity Capture-MS Homo sapiens
56 MRPL39 54148
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
57 KLF4  
Affinity Capture-MS Homo sapiens
58 EXOSC6 118460
Two-hybrid Homo sapiens
59 SPATA5L1 79029
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
60 MECP2 4204
Affinity Capture-MS Homo sapiens
61 BTRC 8945
Affinity Capture-MS Homo sapiens
62 PMPCB 9512
Proximity Label-MS Homo sapiens
63 TACO1  
Proximity Label-MS Homo sapiens
64 FASTKD2  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
65 VWA8 23078
Proximity Label-MS Homo sapiens
66 MRPL47 57129
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
67 HSPD1 3329
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
68 MTERF3  
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
69 KIF14 9928
Affinity Capture-MS Homo sapiens
70 CINP  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
71 LIN28A  
Affinity Capture-MS Homo sapiens
72 MDH2 4191
Proximity Label-MS Homo sapiens
73 KLF16  
Affinity Capture-MS Homo sapiens
74 L1TD1  
Affinity Capture-MS Homo sapiens
75 MRPL13  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
76 CLK2 1196
Two-hybrid Homo sapiens
77 MRPL32 64983
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
78 C6orf203  
Proximity Label-MS Homo sapiens
79 MKLN1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
80 MRPL17  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
81 RC3H2  
Affinity Capture-MS Homo sapiens
82 FASTKD5  
Proximity Label-MS Homo sapiens
83 MRPL45 84311
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
84 Cenpe  
Affinity Capture-MS Mus musculus
85 MRPL30  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
86 RBFOX2 23543
Two-hybrid Homo sapiens
87 MALSU1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
88 ARMC8 25852
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
89 MRPL14 64928
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
90 YBX2 51087
Affinity Capture-MS Homo sapiens
91 RPL19 6143
Affinity Capture-MS Homo sapiens
92 YPEL5 51646
Affinity Capture-MS Homo sapiens
93 TUFM 7284
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
94 ARHGEF1 9138
Affinity Capture-MS Homo sapiens
95 HSCB 150274
Proximity Label-MS Homo sapiens
96 UBR5 51366
Affinity Capture-MS Homo sapiens
97 MRPL37 51253
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
98 GID8 54994
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
99 MRPL51 51258
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
100 AARS2  
Affinity Capture-MS Homo sapiens
101 LOC100132735  
Protein-RNA Homo sapiens
102 CCDC109B 55013
Proximity Label-MS Homo sapiens
103 TBRG4 9238
Proximity Label-MS Homo sapiens
104 CYC1 1537
Co-fractionation Homo sapiens
105 MRPL3  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
106 CSNK1E 1454
Affinity Capture-MS Homo sapiens
107 MTFMT  
Proximity Label-MS Homo sapiens
108 FAM83H 286077
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
109 MRPL11 65003
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
110 MTRF1L  
Proximity Label-MS Homo sapiens
111 TMEM70  
Proximity Label-MS Homo sapiens
112 CYLD  
Affinity Capture-MS Homo sapiens
113 RMND5A 64795
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
114 MRPL2 51069
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
115 GNPNAT1 64841
Affinity Capture-MS Homo sapiens
116 Pdlim5 56376
Affinity Capture-MS Mus musculus
117 MRPL41 64975
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
118 Brwd3  
Affinity Capture-MS Mus musculus
119 OXA1L  
Affinity Capture-MS Homo sapiens
120 HNRNPD 3184
Affinity Capture-MS Homo sapiens
121 MRPL44  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
122 MRPL40 64976
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
123 WBSCR16  
Affinity Capture-MS Homo sapiens
124 ACKR3 57007
Affinity Capture-MS Homo sapiens
125 MRPL21 219927
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
126 MRRF  
Proximity Label-MS Homo sapiens
127 ABT1 29777
Affinity Capture-MS Homo sapiens
128 MRPS12  
Proximity Label-MS Homo sapiens
129 MTIF2 4528
Proximity Label-MS Homo sapiens
130 RPS2 6187
Co-fractionation Homo sapiens
131 MRPL24  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
132 MRPL35  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
133 YBX1 4904
Affinity Capture-MS Homo sapiens
134 MTIF3  
Proximity Label-MS Homo sapiens
135 MRPL9 65005
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
136 MRPL16  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
137 RPL37 6167
Affinity Capture-MS Homo sapiens
138 GLS 2744
Affinity Capture-MS Homo sapiens
139 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
140 RPS8 6202
Affinity Capture-MS Homo sapiens
141 SRSF5 6430
Affinity Capture-MS Homo sapiens
142 GADD45GIP1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
143 HNRNPA1 3178
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
144 MRPL50 54534
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
145 NHP2 55651
Affinity Capture-MS Homo sapiens
146 C17orf80 55028
Proximity Label-MS Homo sapiens
147 HTRA2 27429
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
148 MRPL15 29088
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
149 C12orf65  
Proximity Label-MS Homo sapiens
150 MYCN  
Affinity Capture-MS Homo sapiens
151 PRR3  
Affinity Capture-MS Homo sapiens
152 MRPL52  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
153 PCBP1 5093
Affinity Capture-MS Homo sapiens
154 MRPL19 9801
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
155 MTG1  
Proximity Label-MS Homo sapiens
156 MRPL38  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
157 MYC  
Affinity Capture-MS Homo sapiens
158 RPA3 6119
Proximity Label-MS Homo sapiens
159 DHX30 22907
Proximity Label-MS Homo sapiens
160 SAV1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
161 TSFM 10102
Proximity Label-MS Homo sapiens
162 RPL27A 6157
Affinity Capture-MS Homo sapiens
163 ACAD9 28976
Proximity Label-MS Homo sapiens
164 SRSF10 10772
Affinity Capture-MS Homo sapiens
165 PDPR 55066
Affinity Capture-MS Homo sapiens
166 EIF2B1 1967
Two-hybrid Homo sapiens
167 CD55 1604
Co-fractionation Homo sapiens
168 MARS2 92935
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
169 MRPL34  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
170 HIST1H1T 3010
Affinity Capture-MS Homo sapiens
171 METTL15  
Proximity Label-MS Homo sapiens
172 MCUR1 63933
Proximity Label-MS Homo sapiens
173 RBMS2 5939
Affinity Capture-MS Homo sapiens
174 SOX2