Gene description for NDUFA9
Gene name NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
Gene symbol NDUFA9
Other names/aliases CC6
CI-39k
CI39k
NDUFS2L
SDR22E1
Species Homo sapiens
 Database cross references - NDUFA9
ExoCarta ExoCarta_4704
Vesiclepedia VP_4704
Entrez Gene 4704
HGNC 7693
MIM 603834
UniProt Q16795  
 NDUFA9 identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Mesenchymal stem cells 36408942    
 Gene ontology annotations for NDUFA9
Molecular Function
    NADH dehydrogenase activity GO:0003954 IMP
    NADH dehydrogenase activity GO:0003954 NAS
    protein binding GO:0005515 IPI
    NADH dehydrogenase (ubiquinone) activity GO:0008137 NAS
    protein-containing complex binding GO:0044877 IBA
    protein-containing complex binding GO:0044877 IDA
Biological Process
    mitochondrial electron transport, NADH to ubiquinone GO:0006120 NAS
    ubiquinone biosynthetic process GO:0006744 IBA
    sodium ion transport GO:0006814 NAS
    circadian rhythm GO:0007623 IDA
    aerobic respiration GO:0009060 NAS
    mitochondrial respiratory chain complex I assembly GO:0032981 IMP
    proton motive force-driven mitochondrial ATP synthesis GO:0042776 NAS
    proton transmembrane transport GO:1902600 IEA
Subcellular Localization
    nucleus GO:0005634 HDA
    mitochondrion GO:0005739 HTP
    mitochondrion GO:0005739 IBA
    mitochondrial inner membrane GO:0005743 IDA
    mitochondrial matrix GO:0005759 IDA
    mitochondrial matrix GO:0005759 TAS
    mitochondrial membrane GO:0031966 IDA
    respiratory chain complex I GO:0045271 IDA
 Experiment description of studies that identified NDUFA9 in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 488
MISEV standards
EM
Biophysical techniques
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for NDUFA9
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 AFG3L2 10939
Co-fractionation Homo sapiens
2 HSPD1 3329
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
3 SLIRP 81892
Proximity Label-MS Homo sapiens
4 C6orf203  
Proximity Label-MS Homo sapiens
5 UQCRFS1 7386
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
6 KIF23 9493
Affinity Capture-MS Homo sapiens
7 POR 5447
Co-fractionation Homo sapiens
8 PTPN22  
Affinity Capture-MS Homo sapiens
9 VAPA 9218
Affinity Capture-MS Homo sapiens
10 TPP1 1200
Co-fractionation Homo sapiens
11 HINT2 84681
Proximity Label-MS Homo sapiens
12 ATP6V1C1 528
Co-fractionation Homo sapiens
13 MME 4311
Affinity Capture-MS Homo sapiens
14 NEDD8-MDP1 100528064
Affinity Capture-MS Homo sapiens
15 TRUB2  
Proximity Label-MS Homo sapiens
16 DDX28  
Proximity Label-MS Homo sapiens
17 MTG2  
Proximity Label-MS Homo sapiens
18 NGRN  
Proximity Label-MS Homo sapiens
19 KIF20A 10112
Affinity Capture-MS Homo sapiens
20 EYA2  
Affinity Capture-MS Homo sapiens
21 DNAJC25 548645
Affinity Capture-MS Homo sapiens
22 UQCR10 29796
Affinity Capture-MS Homo sapiens
23 NDUFA4 4697
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
24 PDHB 5162
Co-fractionation Homo sapiens
25 NDUFB6 4712
Affinity Capture-MS Homo sapiens
26 NDUFA10 4705
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 DNAJC15  
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
28 NDUFS2 4720
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
29 GFM2 84340
Proximity Label-MS Homo sapiens
30 CCDC90B  
Proximity Label-MS Homo sapiens
31 TOMM22 56993
Co-fractionation Homo sapiens
32 LRPPRC 10128
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
33 KIAA1429 25962
Affinity Capture-MS Homo sapiens
34 C9orf78 51759
Affinity Capture-MS Homo sapiens
35 NDUFB9 4715
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
36 NDUFS3 4722
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
37 CRYZ 1429
Proximity Label-MS Homo sapiens
38 TFAM 7019
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
39 NDUFB8 4714
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
40 ACAP2 23527
Affinity Capture-MS Homo sapiens
41 SDHB 6390
Co-fractionation Homo sapiens
42 COX7A2L 9167
Co-fractionation Homo sapiens
43 HLA-B 3106
Co-fractionation Homo sapiens
44 TIMMDC1  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
45 PRC1 9055
Affinity Capture-MS Homo sapiens
46 C8orf82  
Proximity Label-MS Homo sapiens
47 IQGAP1 8826
Co-fractionation Homo sapiens
48 NDUFA5 4698
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
49 COA3 28958
Affinity Capture-Western Homo sapiens
Co-fractionation Homo sapiens
50 GPR55  
Affinity Capture-MS Homo sapiens
51 SSR1 6745
Co-fractionation Homo sapiens
52 MAD2L2 10459
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
53 C21orf33  
Proximity Label-MS Homo sapiens
54 NR3C1 2908
Proximity Label-MS Homo sapiens
55 MRPS26 64949
Proximity Label-MS Homo sapiens
56 SURF1  
Proximity Label-MS Homo sapiens
57 MRRF  
Proximity Label-MS Homo sapiens
58 EXD2  
Proximity Label-MS Homo sapiens
59 COMT 1312
Co-fractionation Homo sapiens
60 HLA-DQB1 3119
Affinity Capture-MS Homo sapiens
61 NDUFV1 4723
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
62 PHB 5245
Co-fractionation Homo sapiens
63 TOMM40 10452
Co-fractionation Homo sapiens
64 NDUFV3 4731
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
65 ABCC2 1244
Co-fractionation Homo sapiens
66 GTSE1 51512
Affinity Capture-MS Homo sapiens
67 CALR 811
Co-fractionation Homo sapiens
68 ANKRD34C  
Co-fractionation Homo sapiens
69 NDUFA11 126328
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
70 FASTKD2  
Proximity Label-MS Homo sapiens
71 COX2 4513
Co-fractionation Homo sapiens
72 NDUFA7 4701
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
73 NDUFS1 4719
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
74 UQCRQ 27089
Co-fractionation Homo sapiens
75 NDUFS5 4725
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
76 MTERF3  
Proximity Label-MS Homo sapiens
77 NDUFB10 4716
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
78 KIF14 9928
Affinity Capture-MS Homo sapiens
79 EMC8 10328
Affinity Capture-MS Homo sapiens
80 MDH2 4191
Proximity Label-MS Homo sapiens
81 NNT 23530
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
82 NDUFV2 4729
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
83 DLD 1738
Co-fractionation Homo sapiens
84 MTCH2 23788
Co-fractionation Homo sapiens
85 P4HA1 5033
Co-fractionation Homo sapiens
86 NDUFS4 4724
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
87 GMDS 2762
Co-fractionation Homo sapiens
88 COX15 1355
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
89 FASTKD5  
Proximity Label-MS Homo sapiens
90 NDUFB7 4713
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
91 C20orf24  
Co-fractionation Homo sapiens
92 ITGAD  
Affinity Capture-MS Homo sapiens
93 EMP3 2014
Affinity Capture-MS Homo sapiens
94 HSP90B1 7184
Co-fractionation Homo sapiens
95 NDUFA8 4702
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
96 TUFM 7284
Proximity Label-MS Homo sapiens
97 DNAJB8  
Affinity Capture-MS Homo sapiens
98 HSCB 150274
Proximity Label-MS Homo sapiens
99 HIF1AN 55662
Affinity Capture-MS Homo sapiens
100 PTPN21 11099
Affinity Capture-MS Homo sapiens
101 KRTAP6-2  
Two-hybrid Homo sapiens
102 BTF3 689
Affinity Capture-MS Homo sapiens
103 VCP 7415
Co-fractionation Homo sapiens
104 TRIM21 6737
Affinity Capture-MS Homo sapiens
105 NTRK1 4914
Affinity Capture-MS Homo sapiens
106 GARS 2617
Cross-Linking-MS (XL-MS) Homo sapiens
107 MRPS6  
Affinity Capture-MS Homo sapiens
108 CCDC109B 55013
Proximity Label-MS Homo sapiens
109 OPA1 4976
Co-fractionation Homo sapiens
110 LAMP1 3916
Proximity Label-MS Homo sapiens
111 GFM1 85476
Proximity Label-MS Homo sapiens
112 MRPS12  
Proximity Label-MS Homo sapiens
113 CYC1 1537
Co-fractionation Homo sapiens
114 UQCRC1 7384
Co-fractionation Homo sapiens
115 MCU 90550
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
116 PIGS 94005
Affinity Capture-MS Homo sapiens
117 PCM1 5108
Two-hybrid Homo sapiens
118 MRPL11 65003
Proximity Label-MS Homo sapiens
119 MTRF1L  
Proximity Label-MS Homo sapiens
120 DNAJC30  
Affinity Capture-MS Homo sapiens
121 MYL12A 10627
Co-fractionation Homo sapiens
122 VDAC2 7417
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
123 NIPSNAP1 8508
Co-fractionation Homo sapiens
124 ATP5B 506
Co-fractionation Homo sapiens
125 COX4I1 1327
Co-fractionation Homo sapiens
Proximity Label-MS Homo sapiens
126 NDUFB5 4711
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
127 ANLN 54443
Affinity Capture-MS Homo sapiens
128 CYSRT1 375791
Two-hybrid Homo sapiens
129 C15orf48  
Affinity Capture-MS Homo sapiens
130 C9orf72  
Affinity Capture-MS Homo sapiens
131 OTC 5009
Proximity Label-MS Homo sapiens
132 TOMM5  
Co-fractionation Homo sapiens
133 APLNR  
Affinity Capture-MS Homo sapiens
134 HADHB 3032
Co-fractionation Homo sapiens
135 HADHA 3030
Co-fractionation Homo sapiens
136 MINOS1  
Co-fractionation Homo sapiens
137 CANX 821
Co-fractionation Homo sapiens
138 Sirt3  
Affinity Capture-Western Mus musculus
139 MTIF2 4528
Proximity Label-MS Homo sapiens
140 BCKDHB 594
Co-fractionation Homo sapiens
141 NDUFA13 51079
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
142 CHCHD1  
Proximity Label-MS Homo sapiens
143 RC3H2  
Affinity Capture-MS Homo sapiens
144 CLPP 8192
Proximity Label-MS Homo sapiens
145 MTIF3  
Proximity Label-MS Homo sapiens
146 CYTB  
Affinity Capture-MS Homo sapiens
147 UQCRC2 7385
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
148 PON2 5445
Co-fractionation Homo sapiens
149 PKDREJ  
Cross-Linking-MS (XL-MS) Homo sapiens
150 GPR182  
Affinity Capture-MS Homo sapiens
151 GOLT1B 51026
Affinity Capture-MS Homo sapiens
152 NDUFAB1 4706
Affinity Capture-MS Homo sapiens
153 LAMTOR2 28956
Co-fractionation Homo sapiens
154 CUL3 8452
Affinity Capture-MS Homo sapiens
155 ATP5F1 515
Co-fractionation Homo sapiens
156 RMND1 55005
Proximity Label-MS Homo sapiens
157 EGFR 1956
Affinity Capture-MS Homo sapiens
158 FBXO6 26270
Affinity Capture-MS Homo sapiens
159 ATP1B3 483
Co-fractionation Homo sapiens
160 RAD54L 8438
Negative Genetic Homo sapiens
161 RIPK4  
Affinity Capture-MS Homo sapiens
162 FN1 2335
Affinity Capture-MS Homo sapiens
163 OCIAD1 54940
Affinity Capture-MS Homo sapiens
164 C17orf80 55028
Proximity Label-MS Homo sapiens
165 AURKB 9212
Affinity Capture-MS Homo sapiens
166 C12orf65  
Proximity Label-MS Homo sapiens
167 PMPCB 9512
Proximity Label-MS Homo sapiens
168 SOAT1 6646
Affinity Capture-MS Homo sapiens
169 TACO1  
Proximity Label-MS Homo sapiens
170 MTG1  
Proximity Label-MS Homo sapiens
171 RPUSD4 84881
Proximity Label-MS Homo sapiens
172 NDUFB3 4709
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
173 RPA3 6119
Proximity Label-MS Homo sapiens
174 NDUFA2 4695
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
175 COX6C 1345
Co-fractionation Homo sapiens
176 PDP1 54704
Affinity Capture-MS Homo sapiens
177 COX6B1 1340
Affinity Capture-MS Homo sapiens
178 ATP6V1A 523
Co-fractionation Homo sapiens
179 TSFM 10102
Proximity Label-MS Homo sapiens
180 ASPH 444
Co-fractionation Homo sapiens
181 NDUFA6  
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
182 ACAD9 28976
Proximity Label-MS Homo sapiens
183 HK1 3098
Co-fractionation Homo sapiens
184 RNF2  
Affinity Capture-MS Homo sapiens
185 NDUFA3  
Affinity Capture-MS Homo sapiens
186 VDAC1 7416
Co-fractionation Homo sapiens
187 CLTC 1213
Affinity Capture-MS Homo sapiens
188 NDUFA12 55967
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
189 NDUFA1 4694
Affinity Capture-MS Homo sapiens
190 HSPA9 3313
Proximity Label-MS Homo sapiens
191 MTM1 4534
Affinity Capture-MS Homo sapiens
192 NDUFC2 4718
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
193 METTL15  
Proximity Label-MS Homo sapiens
194 CORO1C 23603
Co-fractionation Homo sapiens
195 ADGRE5 976
Affinity Capture-MS Homo sapiens
196 MCUR1 63933
Proximity Label-MS Homo sapiens
197 SCCPDH 51097
Co-fractionation Homo sapiens
198 MTRF1  
Proximity Label-MS Homo sapiens
199 IMMT 10989
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
200 YBX1 4904
Co-fractionation Homo sapiens
201 DNAJC28  
Proximity Label-MS Homo sapiens
202 CS 1431
Proximity Label-MS Homo sapiens
203 VWA8 23078
Proximity Label-MS Homo sapiens
204 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
205 PHB2 11331
Co-fractionation Homo sapiens
206 METTL17  
Proximity Label-MS Homo sapiens
207 AUH 549