Gene description for WDR20
Gene name WD repeat domain 20
Gene symbol WDR20
Other names/aliases DMR
Species Homo sapiens
 Database cross references - WDR20
ExoCarta ExoCarta_91833
Vesiclepedia VP_91833
Entrez Gene 91833
HGNC 19667
UniProt Q8TBZ3  
 WDR20 identified in exosomes derived from the following tissue/cell type
Mesenchymal stem cells 36408942    
 Gene ontology annotations for WDR20
Molecular Function
    protein binding GO:0005515 IPI
    deubiquitinase activator activity GO:0035800 IDA
Subcellular Localization
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 TAS
    cytoplasm GO:0005737 IDA
 Experiment description of studies that identified WDR20 in exosomes
1
Experiment ID 488
MISEV standards
EM
Biophysical techniques
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
CANX
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for WDR20
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 YWHAB 7529
Affinity Capture-MS Homo sapiens
2 HNRNPH1 3187
Affinity Capture-RNA Homo sapiens
3 Wdr48  
Affinity Capture-MS Mus musculus
4 LIG4 3981
Two-hybrid Homo sapiens
5 PHLPP1  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
6 MRM1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 PKN2 5586
Affinity Capture-MS Homo sapiens
8 IL17RB  
Affinity Capture-MS Homo sapiens
9 CX3CL1  
Affinity Capture-MS Homo sapiens
10 UBL4A 8266
Affinity Capture-MS Homo sapiens
11 USH1C  
Affinity Capture-MS Homo sapiens
12 USP46 64854
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
13 LAMTOR1 55004
Proximity Label-MS Homo sapiens
14 MARCKS 4082
Proximity Label-MS Homo sapiens
15 ALS2  
Affinity Capture-MS Homo sapiens
16 XPO1 7514
Affinity Capture-MS Homo sapiens
17 RNF19B  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
18 TSPYL6  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
19 LRP4 4038
Affinity Capture-MS Homo sapiens
20 C15orf27  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
21 ZDHHC17 23390
Two-hybrid Homo sapiens
22 LAMP1 3916
Proximity Label-MS Homo sapiens
23 MEX3A  
Affinity Capture-RNA Homo sapiens
24 USP1 7398
Affinity Capture-MS Homo sapiens
25 VSX2 338917
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
26 PHLPP2  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 COL11A2 1302
Affinity Capture-MS Homo sapiens
28 USP12 219333
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
29 SGOL1  
Affinity Capture-MS Homo sapiens
30 ATG9A 79065
Proximity Label-MS Homo sapiens
31 BRD2  
Affinity Capture-MS Homo sapiens
32 RAD51AP1  
Affinity Capture-MS Homo sapiens
33 LAMP2 3920
Proximity Label-MS Homo sapiens
34 HSP90AA1 3320
Affinity Capture-MS Homo sapiens
35 AMFR 267
Affinity Capture-Western Homo sapiens
36 PDHA1 5160
Affinity Capture-MS Homo sapiens
37 SNRPF 6636
Affinity Capture-MS Homo sapiens
38 OPTN 10133
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
39 LYN 4067
Proximity Label-MS Homo sapiens
40 MCAM 4162
Proximity Label-MS Homo sapiens
41 FERMT2 10979
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 APEX1 328
Affinity Capture-RNA Homo sapiens
43 SURF2  
Affinity Capture-MS Homo sapiens
44 POLR1C 9533
Affinity Capture-MS Homo sapiens
45 WDR48 57599
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
46 RAB2A 5862
Proximity Label-MS Homo sapiens
47 YWHAZ 7534
Affinity Capture-MS Homo sapiens
48 YWHAE 7531
Affinity Capture-MS Homo sapiens
49 TYK2 7297
Affinity Capture-MS Homo sapiens
50 RPRM  
Affinity Capture-MS Homo sapiens
51 CIRBP 1153
Affinity Capture-MS Homo sapiens
52 YWHAH 7533
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
53 TRIM35 23087
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
54 SYVN1 84447
Affinity Capture-Western Homo sapiens
55 PNMA2  
Affinity Capture-MS Homo sapiens
56 EPHA2 1969
Proximity Label-MS Homo sapiens
57 LDLR 3949
Positive Genetic Homo sapiens
58 YWHAQ 10971
Affinity Capture-MS Homo sapiens
59 UGT1A9  
Affinity Capture-MS Homo sapiens
60 KRAS 3845
Proximity Label-MS Homo sapiens
61 USP12P1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
62 UBXN1 51035
Affinity Capture-MS Homo sapiens
63 YWHAG 7532
Affinity Capture-MS Homo sapiens
64 BRD4 23476
Affinity Capture-MS Homo sapiens
65 VCP 7415
Affinity Capture-Western Homo sapiens
66 FBXW5  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
67 HSPB8 26353
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
68 VSX1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
69 AR 367
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
70 PAK4 10298
Affinity Capture-MS Homo sapiens
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