Gene ontology annotations for STK39
Experiment description of studies that identified STK39 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for STK39
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
LY86
Affinity Capture-MS
Homo sapiens
2
GSN
2934
Two-hybrid
Homo sapiens
3
PTGIR
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
4
RELL1
768211
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
CSTL1
Affinity Capture-MS
Homo sapiens
6
WNK4
Two-hybrid
Homo sapiens
7
BAGE2
Affinity Capture-MS
Homo sapiens
8
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
9
AATK
Two-hybrid
Homo sapiens
10
TMEM132D
Two-hybrid
Homo sapiens
11
RAMP2
Affinity Capture-MS
Homo sapiens
12
EFNA4
Affinity Capture-MS
Homo sapiens
13
DEFB136
Affinity Capture-MS
Homo sapiens
14
LGI1
Affinity Capture-MS
Homo sapiens
15
PSG1
Affinity Capture-MS
Homo sapiens
16
EHD1
10938
Co-fractionation
Homo sapiens
17
CRLF2
64109
Affinity Capture-MS
Homo sapiens
18
PCNA
5111
Co-fractionation
Homo sapiens
19
HCST
Affinity Capture-MS
Homo sapiens
20
GYPA
Affinity Capture-MS
Homo sapiens
21
SPP1
6696
Two-hybrid
Homo sapiens
22
ATL2
64225
Affinity Capture-MS
Homo sapiens
23
CST8
Affinity Capture-MS
Homo sapiens
24
STK39
27347
Biochemical Activity
Homo sapiens
Biochemical Activity
Homo sapiens
25
PML
5371
Affinity Capture-MS
Homo sapiens
26
NOL3
8996
Co-fractionation
Homo sapiens
27
CUL3
8452
Affinity Capture-MS
Homo sapiens
28
CDC25B
994
Affinity Capture-MS
Homo sapiens
29
LAMP2
3920
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
30
XPNPEP1
7511
Co-fractionation
Homo sapiens
31
FKBP9
11328
Co-fractionation
Homo sapiens
32
CHCHD4
Affinity Capture-MS
Homo sapiens
33
KLRG2
346689
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
34
METTL21B
Affinity Capture-MS
Homo sapiens
35
SLC12A2
6558
Two-hybrid
Homo sapiens
36
HNRNPCL2
440563
Affinity Capture-MS
Homo sapiens
37
RNF7
Affinity Capture-MS
Homo sapiens
38
HEXA
3073
Co-fractionation
Homo sapiens
39
TOMM22
56993
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
40
RELL2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
SLC18A2
Affinity Capture-MS
Homo sapiens
42
TSC22D4
81628
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
43
API5
8539
Co-fractionation
Homo sapiens
44
SLC12A6
9990
Affinity Capture-MS
Homo sapiens
45
OSTM1
28962
Affinity Capture-MS
Homo sapiens
46
IL12RB1
Affinity Capture-MS
Homo sapiens
47
SV2A
9900
Affinity Capture-MS
Homo sapiens
48
RELT
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
49
MCM2
4171
Affinity Capture-MS
Homo sapiens
50
KLK15
Affinity Capture-MS
Homo sapiens
51
PLK1
5347
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
52
BRD1
23774
Affinity Capture-MS
Homo sapiens
53
NUBP1
4682
Co-fractionation
Homo sapiens
54
TSC22D2
9819
Two-hybrid
Homo sapiens
55
DHFRL1
Affinity Capture-MS
Homo sapiens
56
PRKY
Affinity Capture-MS
Homo sapiens
57
NUP210P1
Affinity Capture-MS
Homo sapiens
58
HSPH1
10808
Two-hybrid
Homo sapiens
59
MAPK14
1432
Affinity Capture-Western
Homo sapiens
60
BANF2
Affinity Capture-MS
Homo sapiens
61
SLC22A4
6583
Affinity Capture-MS
Homo sapiens
62
RHOA
387
Affinity Capture-MS
Homo sapiens
63
CCT8L2
Affinity Capture-MS
Homo sapiens
64
RPA3
6119
Proximity Label-MS
Homo sapiens
65
ARX
Affinity Capture-MS
Homo sapiens
66
MBP
4155
Biochemical Activity
Homo sapiens
67
EP300
2033
Affinity Capture-MS
Homo sapiens
68
OTOF
Two-hybrid
Homo sapiens
69
ST8SIA4
7903
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
70
HIF1A
3091
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which STK39 is involved
No pathways found