Gene ontology annotations for FMNL1
Experiment description of studies that identified FMNL1 in exosomes
1
Experiment ID
79
MISEV standards
✘
Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20458337
Organism
Homo sapiens
Experiment description
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 1
Authors
"Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name
ICB
Publication year
2010
Sample
B cells
Sample name
RN (HLA-DR15)
Isolation/purification methods
Differential centrifugation Sucrose density gradient Immunobeads (MHC Class II)
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [FT-ICR] Western blotting
2
Experiment ID
81
MISEV standards
✘
Biophysical techniques
✔
CD81|MHCII
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
20458337
Organism
Homo sapiens
Experiment description
MHC class II-associated proteins in B-cell exosomes and potential functional implications for exosome biogenesis - Sample 3
Authors
"Buschow SI, van Balkom BW, Aalberts M, Heck AJ, Wauben M, Stoorvogel W."
Journal name
ICB
Publication year
2010
Sample
B cells
Sample name
RN (HLA-DR15)
Isolation/purification methods
Differential centrifugation Sucrose density gradient Immunobeads (MHC Class II)
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [FT-ICR] Western blotting
3
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
6
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
7
Experiment ID
235
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|Alix|HSC70|GAPDH
Enriched markers
✔
HSP90B1
Negative markers
✔
qNano
Particle analysis
Identified molecule
mRNA
Identification method
RNA Sequencing
PubMed ID
26054723
Organism
Homo sapiens
Experiment description
Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors
"He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name
Carcinogenesis
Publication year
2015
Sample
Hepatocellular carcinoma cells
Sample name
HKCI-8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Sucrose density gradient
Flotation density
1.13-1.19 g/mL
Molecules identified in the study
Protein RNA
Methods used in the study
Western blotting Mass spectrometry RT-PCR RNA Sequencing
8
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
9
Experiment ID
193
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|CD9
Enriched markers
✔
PHB
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
10
Experiment ID
194
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Patients of basement membrane nephropathy
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
11
Experiment ID
195
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
21595033
Organism
Homo sapiens
Experiment description
Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors
"Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name
Proteomics
Publication year
2011
Sample
Urine
Sample name
Urine - Patients of early IgA nephropathy
Isolation/purification methods
Differential centrifugation Ultracentrifugation Sucrose density gradient
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for FMNL1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
RPL11
6135
Affinity Capture-MS
Homo sapiens
2
ATG16L1
55054
Affinity Capture-MS
Homo sapiens
3
RALY
22913
Affinity Capture-MS
Homo sapiens
4
ARHGAP17
55114
Affinity Capture-MS
Homo sapiens
5
FLI1
Affinity Capture-MS
Homo sapiens
6
PFN2
5217
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
7
LSP1
4046
Affinity Capture-MS
Homo sapiens
8
Mcm3
17215
Affinity Capture-MS
Mus musculus
9
OTUD4
Affinity Capture-MS
Homo sapiens
10
CWF19L1
55280
Affinity Capture-MS
Homo sapiens
11
FMNL1
752
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
TOMM40
10452
Affinity Capture-MS
Homo sapiens
13
Tubg1
103733
Affinity Capture-MS
Mus musculus
14
PARP1
142
Affinity Capture-MS
Homo sapiens
15
ABCB8
11194
Affinity Capture-MS
Homo sapiens
16
TMPO
7112
Affinity Capture-MS
Homo sapiens
17
PLEC
5339
Affinity Capture-MS
Homo sapiens
18
NUFIP2
57532
Affinity Capture-MS
Homo sapiens
19
SIPA1
6494
Affinity Capture-MS
Homo sapiens
20
KCTD10
83892
Affinity Capture-MS
Homo sapiens
21
TCERG1
10915
Reconstituted Complex
Homo sapiens
22
PFN1
5216
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
23
TUFM
7284
Affinity Capture-MS
Homo sapiens
24
LMO7
4008
Affinity Capture-MS
Homo sapiens
25
AHNAK
79026
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
26
CAP1
10487
Affinity Capture-MS
Homo sapiens
27
ABCF1
23
Affinity Capture-MS
Homo sapiens
28
MTCH2
23788
Affinity Capture-MS
Homo sapiens
29
LIMA1
51474
Affinity Capture-MS
Homo sapiens
30
MS4A1
931
Affinity Capture-MS
Homo sapiens
31
STRN3
29966
Proximity Label-MS
Homo sapiens
32
THOC5
8563
Affinity Capture-MS
Homo sapiens
33
PRPF40A
55660
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
34
CHCHD3
54927
Affinity Capture-MS
Homo sapiens
35
HSP90B1
7184
Affinity Capture-MS
Homo sapiens
36
POLR3E
55718
Affinity Capture-MS
Homo sapiens
37
CORO1A
11151
Affinity Capture-MS
Homo sapiens
38
TRIM54
Two-hybrid
Homo sapiens
39
Cdc20
Affinity Capture-MS
Mus musculus
40
ATAD3A
55210
Affinity Capture-MS
Homo sapiens
41
STOM
2040
Affinity Capture-MS
Homo sapiens
42
COPB1
1315
Affinity Capture-MS
Homo sapiens
43
PPP1R10
Affinity Capture-MS
Homo sapiens
44
PHB2
11331
Affinity Capture-MS
Homo sapiens
45
HSPA1B
3304
Affinity Capture-MS
Homo sapiens
46
PPP1R12A
4659
Affinity Capture-MS
Homo sapiens
47
ACTR5
79913
Affinity Capture-MS
Homo sapiens
48
Otud5
Affinity Capture-MS
Mus musculus
49
ZNF787
Affinity Capture-MS
Homo sapiens
50
FLNB
2317
Affinity Capture-MS
Homo sapiens
51
ARHGAP4
393
Affinity Capture-MS
Homo sapiens
52
SSRP1
6749
Affinity Capture-MS
Homo sapiens
53
ACTN4
81
Affinity Capture-MS
Homo sapiens
54
HSPA5
3309
Affinity Capture-MS
Homo sapiens
55
GEMIN5
25929
Affinity Capture-MS
Homo sapiens
56
XRCC6
2547
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
57
FLII
2314
Affinity Capture-MS
Homo sapiens
58
TIA1
7072
Affinity Capture-MS
Homo sapiens
59
CD44
960
Affinity Capture-MS
Homo sapiens
60
Tnks2
Affinity Capture-MS
Mus musculus
61
NPM1
4869
Affinity Capture-MS
Homo sapiens
62
RAC1
5879
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
63
Prkaa1
Affinity Capture-MS
Mus musculus
64
GAS7
Reconstituted Complex
Homo sapiens
65
HMG20A
Two-hybrid
Homo sapiens
66
CORO1C
23603
Affinity Capture-MS
Homo sapiens
67
SUPT16H
11198
Affinity Capture-MS
Homo sapiens
68
APP
351
Reconstituted Complex
Homo sapiens
69
ATP5B
506
Affinity Capture-MS
Homo sapiens
70
XRCC5
7520
Affinity Capture-MS
Homo sapiens
71
TAP2
6891
Affinity Capture-MS
Homo sapiens
72
SIPA1L3
Affinity Capture-MS
Homo sapiens
73
VDAC1
7416
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which FMNL1 is involved