Gene description for RTEL1
Gene name regulator of telomere elongation helicase 1
Gene symbol RTEL1
Other names/aliases C20orf41
DKCA4
DKCB5
NHL
RTEL
Species Homo sapiens
 Database cross references - RTEL1
ExoCarta ExoCarta_51750
Vesiclepedia VP_51750
Entrez Gene 51750
HGNC 15888
MIM 608833
UniProt Q9NZ71  
 RTEL1 identified in exosomes derived from the following tissue/cell type
Hepatocytes 26054723    
Urine 21595033    
Urine 21595033    
Urine 21595033    
 Gene ontology annotations for RTEL1
Molecular Function
    DNA binding GO:0003677 IEA
    DNA helicase activity GO:0003678 IBA
    DNA helicase activity GO:0003678 IMP
    DNA helicase activity GO:0003678 ISS
    DNA helicase activity GO:0003678 TAS
    DNA clamp loader activity GO:0003689 IEA
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IBA
    ATP binding GO:0005524 IMP
    four-way junction helicase activity GO:0009378 IEA
    isomerase activity GO:0016853 IEA
    ATP hydrolysis activity GO:0016887 IEA
    double-stranded DNA helicase activity GO:0036121 IEA
    metal ion binding GO:0046872 IEA
    4 iron, 4 sulfur cluster binding GO:0051539 IEA
    forked DNA-dependent helicase activity GO:0061749 IEA
    cohesin loader activity GO:0061775 IEA
    DNA polymerase binding GO:0070182 IBA
    chromatin extrusion motor activity GO:0140584 IEA
    ATP-dependent H3-H4 histone complex chaperone activity GO:0140665 IEA
    ATP-dependent H2AZ histone chaperone activity GO:0140849 IEA
    single-stranded 3'-5' DNA helicase activity GO:1990518 IEA
Biological Process
    telomere maintenance GO:0000723 IMP
    telomere maintenance GO:0000723 ISS
    DNA strand displacement GO:0000732 ISS
    DNA strand displacement GO:0000732 TAS
    DNA repair GO:0006281 IEA
    chromatin remodeling GO:0006338 IEA
    regulation of double-strand break repair via homologous recombination GO:0010569 IBA
    regulation of double-strand break repair via homologous recombination GO:0010569 IMP
    replication fork processing GO:0031297 ISS
    positive regulation of telomere maintenance GO:0032206 ISS
    DNA duplex unwinding GO:0032508 IBA
    DNA duplex unwinding GO:0032508 ISS
    telomere maintenance in response to DNA damage GO:0043247 ISS
    negative regulation of DNA recombination GO:0045910 IBA
    negative regulation of DNA recombination GO:0045910 ISS
    telomeric loop disassembly GO:0090657 IBA
    telomeric loop disassembly GO:0090657 IMP
    telomeric loop disassembly GO:0090657 ISS
    chromatin looping GO:0140588 IEA
    mitotic telomere maintenance via semi-conservative replication GO:1902990 ISS
    positive regulation of telomere capping GO:1904355 IMP
    positive regulation of telomere maintenance via telomere lengthening GO:1904358 IMP
    negative regulation of t-circle formation GO:1904430 IBA
    negative regulation of t-circle formation GO:1904430 IMP
    negative regulation of t-circle formation GO:1904430 ISS
    negative regulation of t-circle formation GO:1904430 TAS
    negative regulation of telomere maintenance in response to DNA damage GO:1904506 ISS
    positive regulation of telomeric loop disassembly GO:1904535 ISS
Subcellular Localization
    chromosome, telomeric region GO:0000781 ISS
    nucleus GO:0005634 IBA
    nucleus GO:0005634 IDA
    nucleus GO:0005634 ISS
    nucleoplasm GO:0005654 IDA
    nucleoplasm GO:0005654 TAS
    nuclear speck GO:0016607 IDA
    nuclear membrane GO:0031965 IDA
 Experiment description of studies that identified RTEL1 in exosomes
1
Experiment ID 237
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
2
Experiment ID 193
MISEV standards
EM
Biophysical techniques
CD63|CD9
Enriched markers
PHB
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Normal
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 194
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Patients of basement membrane nephropathy
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 195
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 21595033    
Organism Homo sapiens
Experiment description Proteomic analysis of urinary exosomes from patients of early IgA nephropathy and thin basement membrane nephropathy.
Authors "Moon PG, Lee JE, You S, Kim TK, Cho JH, Kim IS, Kwon TH, Kim CD, Park SH, Hwang D, Kim YL, Baek MC."
Journal name Proteomics
Publication year 2011
Sample Urine
Sample name Urine - Patients of early IgA nephropathy
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RTEL1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 TRIM52  
Affinity Capture-MS Homo sapiens
2 LOC100128554  
Affinity Capture-MS Homo sapiens
3 RIT1 6016
Negative Genetic Homo sapiens
4 LIMK1 3984
Affinity Capture-MS Homo sapiens
5 CA6 765
Affinity Capture-MS Homo sapiens
6 ANKLE2 23141
Affinity Capture-MS Homo sapiens
7 TUBB 203068
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 SLC31A1 1317
Affinity Capture-MS Homo sapiens
9 NCK1 4690
Affinity Capture-MS Homo sapiens
10 SLC18A1  
Affinity Capture-MS Homo sapiens
11 D2HGDH 728294
Affinity Capture-MS Homo sapiens
12 MIF4GD 57409
Affinity Capture-MS Homo sapiens
13 AATF  
Affinity Capture-MS Homo sapiens
14 DVL2 1856
Affinity Capture-MS Homo sapiens
15 CIB2  
Affinity Capture-MS Homo sapiens
16 LIPH 200879
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
17 CIAO1 9391
Affinity Capture-MS Homo sapiens
18 PRSS21  
Affinity Capture-MS Homo sapiens
19 FAM96A  
Affinity Capture-MS Homo sapiens
20 PSME3 10197
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
21 NCAPH2  
Affinity Capture-MS Homo sapiens
22 ATP13A2  
Affinity Capture-MS Homo sapiens
23 RPA2 6118
Affinity Capture-MS Homo sapiens
24 C12orf74  
Affinity Capture-MS Homo sapiens
25 ARL15 54622
Affinity Capture-MS Homo sapiens
26 RPA1 6117
Affinity Capture-MS Homo sapiens
27 LMNB2 84823
Affinity Capture-MS Homo sapiens
28 C2orf27B  
Affinity Capture-MS Homo sapiens
29 SULT1C4  
Affinity Capture-MS Homo sapiens
30 EFNA3  
Affinity Capture-MS Homo sapiens
31 VWA9  
Affinity Capture-MS Homo sapiens
32 SS18L2  
Affinity Capture-MS Homo sapiens
33 CUL3 8452
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
34 CCNYL1 151195
Affinity Capture-MS Homo sapiens
35 PDDC1 347862
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
36 HCST  
Affinity Capture-MS Homo sapiens
37 THAP11 57215
Affinity Capture-MS Homo sapiens
38 KATNA1 11104
Affinity Capture-MS Homo sapiens
39 VWA5A 4013
Affinity Capture-MS Homo sapiens
40 METTL21B  
Affinity Capture-MS Homo sapiens
41 SLURP1  
Affinity Capture-MS Homo sapiens
42 PSME1 5720
Affinity Capture-MS Homo sapiens
43 RIPK4  
Affinity Capture-MS Homo sapiens
44 C10orf91  
Affinity Capture-MS Homo sapiens
45 SASS6 163786
Affinity Capture-MS Homo sapiens
46 FAM96B 51647
Affinity Capture-MS Homo sapiens
47 PRPS2 5634
Affinity Capture-MS Homo sapiens
48 LRP1 4035
Affinity Capture-MS Homo sapiens
49 WDFY3 23001
Affinity Capture-MS Homo sapiens
50 SKAP1 8631
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
51 PPP4R1L  
Affinity Capture-MS Homo sapiens
52 CYS1 192668
Affinity Capture-MS Homo sapiens
53 MMS19 64210
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
54 UBXN11  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
55 FAM13A 10144
Affinity Capture-MS Homo sapiens
56 RPA3 6119
Affinity Capture-MS Homo sapiens
57 LRRC29  
Affinity Capture-MS Homo sapiens
58 RAMP2  
Affinity Capture-MS Homo sapiens
59 VAV2 7410
Affinity Capture-MS Homo sapiens
60 SLX4  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Co-localization Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
61 EGFR 1956
Negative Genetic Homo sapiens
62 NDUFA13 51079
Affinity Capture-MS Homo sapiens
63 NSUN5P1  
Affinity Capture-MS Homo sapiens
64 SSSCA1 10534
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
65 PPM1A 5494
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
66 TTC9C 283237
Affinity Capture-MS Homo sapiens
67 THBS3 7059
Affinity Capture-MS Homo sapiens
68 B4GALT2  
Affinity Capture-MS Homo sapiens
69 PDCD1  
Affinity Capture-MS Homo sapiens
70 C11orf30  
Affinity Capture-MS Homo sapiens
71 KRAS 3845
Negative Genetic Homo sapiens
72 KRT2 3849
Affinity Capture-MS Homo sapiens
73 PTGES3 10728
Affinity Capture-MS Homo sapiens
74 ERCC4  
Affinity Capture-Western Homo sapiens
75 ISLR 3671
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
76 GAS2L1 10634
Affinity Capture-MS Homo sapiens
77 RFXANK  
Affinity Capture-MS Homo sapiens
78 NEUROG3  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
79 CBWD1 55871
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
80 EFNB3 1949
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
81 POLR2A 5430
Co-localization Homo sapiens
82 RAD51  
Affinity Capture-MS Homo sapiens
83 OSTM1 28962
Affinity Capture-MS Homo sapiens
84 XRCC5 7520
Affinity Capture-MS Homo sapiens
85 UBXN6 80700
Affinity Capture-MS Homo sapiens
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