Gene description for PRKD2
Gene name protein kinase D2
Gene symbol PRKD2
Other names/aliases HSPC187
PKD2
nPKC-D2
Species Homo sapiens
 Database cross references - PRKD2
ExoCarta ExoCarta_25865
Vesiclepedia VP_25865
Entrez Gene 25865
HGNC 17293
MIM 607074
UniProt Q9BZL6  
 PRKD2 identified in exosomes derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for PRKD2
Molecular Function
    protein kinase activity GO:0004672 IDA
    protein serine/threonine kinase activity GO:0004674 IBA
    protein serine/threonine kinase activity GO:0004674 IDA
    protein serine/threonine kinase activity GO:0004674 IMP
    protein serine/threonine kinase activity GO:0004674 NAS
    diacylglycerol-dependent serine/threonine kinase activity GO:0004697 TAS
    calcium,diacylglycerol-dependent serine/threonine kinase activity GO:0004698 IEA
    diacylglycerol-dependent, calcium-independent serine/threonine kinase activity GO:0004699 IEA
    protein kinase C binding GO:0005080 IPI
    protein binding GO:0005515 IPI
    ATP binding GO:0005524 IEA
    metal ion binding GO:0046872 IEA
    protein serine kinase activity GO:0106310 IGI
Biological Process
    angiogenesis GO:0001525 IEA
    positive regulation of endothelial cell proliferation GO:0001938 IGI
    positive regulation of endothelial cell proliferation GO:0001938 IMP
    adaptive immune response GO:0002250 IEA
    protein phosphorylation GO:0006468 IDA
    protein phosphorylation GO:0006468 NAS
    cell adhesion GO:0007155 IEA
    phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007200 IBA
    positive regulation of endothelial cell migration GO:0010595 IMP
    peptidyl-serine phosphorylation GO:0018105 IMP
    peptidyl-threonine phosphorylation GO:0018107 IMP
    sphingolipid biosynthetic process GO:0030148 TAS
    positive regulation of vascular endothelial growth factor receptor signaling pathway GO:0030949 IMP
    positive regulation of interleukin-2 production GO:0032743 ISS
    positive regulation of interleukin-8 production GO:0032757 IMP
    intracellular signal transduction GO:0035556 IBA
    intracellular signal transduction GO:0035556 IMP
    cellular response to vascular endothelial growth factor stimulus GO:0035924 IGI
    cellular response to vascular endothelial growth factor stimulus GO:0035924 IMP
    positive regulation of blood vessel endothelial cell migration GO:0043536 IGI
    positive regulation of blood vessel endothelial cell migration GO:0043536 IMP
    positive regulation of fibroblast growth factor receptor signaling pathway GO:0045743 IMP
    positive regulation of angiogenesis GO:0045766 IGI
    positive regulation of angiogenesis GO:0045766 IMP
    positive regulation of cell adhesion GO:0045785 IMP
    positive regulation of transcription by RNA polymerase II GO:0045944 IDA
    positive regulation of transcription by RNA polymerase II GO:0045944 IGI
    positive regulation of transcription by RNA polymerase II GO:0045944 IMP
    protein autophosphorylation GO:0046777 IDA
    protein autophosphorylation GO:0046777 TAS
    vascular endothelial growth factor receptor signaling pathway GO:0048010 IGI
    vascular endothelial growth factor receptor signaling pathway GO:0048010 IMP
    T cell receptor signaling pathway GO:0050852 IDA
    positive regulation of T cell receptor signaling pathway GO:0050862 ISS
    positive regulation of DNA-binding transcription factor activity GO:0051091 IMP
    positive regulation of NF-kappaB transcription factor activity GO:0051092 IMP
    endothelial tube morphogenesis GO:0061154 TAS
    regulation of T cell apoptotic process GO:0070232 IMP
    positive regulation of ERK1 and ERK2 cascade GO:0070374 ISS
    positive regulation of DNA biosynthetic process GO:2000573 ISS
    positive regulation of endothelial cell chemotaxis GO:2001028 IGI
    positive regulation of endothelial cell chemotaxis GO:2001028 IMP
Subcellular Localization
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 IDA
    cytoplasm GO:0005737 IDA
    Golgi apparatus GO:0005794 IEA
    cytosol GO:0005829 IBA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    plasma membrane GO:0005886 IEA
 Experiment description of studies that identified PRKD2 in exosomes
1
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for PRKD2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 TACR3  
Affinity Capture-MS Homo sapiens
2 BRINP2  
Affinity Capture-MS Homo sapiens
3 PFDN1 5201
Two-hybrid Homo sapiens
4 HDAC4  
Affinity Capture-MS Homo sapiens
5 SPRTN  
Affinity Capture-MS Homo sapiens
6 SUB1 10923
Affinity Capture-MS Homo sapiens
7 NGRN  
Affinity Capture-MS Homo sapiens
8 ST8SIA4 7903
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
9 TMEM9B 56674
Affinity Capture-MS Homo sapiens
10 PRPF40A 55660
Affinity Capture-MS Homo sapiens
11 RFFL 117584
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
12 FCGR3A  
Affinity Capture-MS Homo sapiens
13 TPSB2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
14 PHYHIP 9796
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
15 YWHAZ 7534
Affinity Capture-MS Homo sapiens
16 MTF2  
Two-hybrid Homo sapiens
17 HEY1  
Two-hybrid Homo sapiens
18 SEC23IP 11196
Affinity Capture-MS Homo sapiens
19 LRRC48  
Affinity Capture-MS Homo sapiens
20 PLA2G10  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
21 YWHAH 7533
Affinity Capture-MS Homo sapiens
22 ATG16L1 55054
Affinity Capture-MS Homo sapiens
23 TERT  
Affinity Capture-MS Homo sapiens
24 SNX27 81609
Affinity Capture-MS Homo sapiens
25 IL13RA2 3598
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
26 CASK 8573
Two-hybrid Homo sapiens
27 FCN3 8547
Affinity Capture-MS Homo sapiens
28 SOCS7  
Affinity Capture-MS Homo sapiens
29 DOT1L 84444
Affinity Capture-MS Homo sapiens
30 TNFSF8  
Affinity Capture-MS Homo sapiens
31 VSIG4  
Affinity Capture-MS Homo sapiens
32 HDAC7  
Affinity Capture-Western Homo sapiens
33 GDPD5 81544
Affinity Capture-MS Homo sapiens
34 NTRK1 4914
Affinity Capture-MS Homo sapiens
35 CDHR4  
Affinity Capture-MS Homo sapiens
36 YWHAQ 10971
Affinity Capture-MS Homo sapiens
37 APBA1  
Affinity Capture-MS Homo sapiens
38 ARPC5 10092
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
39 HDAC5 10014
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
40 UBXN6 80700
Affinity Capture-MS Homo sapiens
41 LY86  
Affinity Capture-MS Homo sapiens
42 UPK2 7379
Affinity Capture-MS Homo sapiens
43 DST 667
Two-hybrid Homo sapiens
44 PPP2R2B 5521
Affinity Capture-MS Homo sapiens
45 SKP2  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
46 VIPAS39 63894
Affinity Capture-MS Homo sapiens
47 XPO1 7514
Affinity Capture-MS Homo sapiens
48 IL25  
Affinity Capture-MS Homo sapiens
49 MGARP  
Affinity Capture-MS Homo sapiens
50 CUL3 8452
Affinity Capture-MS Homo sapiens
51 SLC9A3R2 9351
Affinity Capture-MS Homo sapiens
52 RARB  
Two-hybrid Homo sapiens
53 PRKD1 5587
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
54 BAP1 8314
Affinity Capture-MS Homo sapiens
55 PRKD3 23683
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
56 SPCS3 60559
Affinity Capture-MS Homo sapiens
57 EPHA7 2045
Affinity Capture-MS Homo sapiens
58 ZNF777  
Affinity Capture-MS Homo sapiens
59 IFNAR1  
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
60 GML  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
61 METTL21B  
Affinity Capture-MS Homo sapiens
62 NXPH3  
Affinity Capture-MS Homo sapiens
63 CDK10  
Affinity Capture-MS Homo sapiens
64 GRIP1  
Two-hybrid Homo sapiens
65 RAE1 8480
Affinity Capture-MS Homo sapiens
66 NGDN  
Affinity Capture-MS Homo sapiens
67 PDLIM7 9260
Two-hybrid Homo sapiens
68 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
69 PSG3  
Two-hybrid Homo sapiens
70 RRBP1 6238
Two-hybrid Homo sapiens
71 FOXRED2  
Affinity Capture-MS Homo sapiens
72 DOCK5 80005
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
73 OPALIN  
Affinity Capture-MS Homo sapiens
74 DNAJA2 10294
Affinity Capture-MS Homo sapiens
75 RSPH14  
Affinity Capture-MS Homo sapiens
76 RBM25 58517
Affinity Capture-MS Homo sapiens
77 C9orf64 84267
Affinity Capture-MS Homo sapiens
78 PLEKHJ1  
Affinity Capture-MS Homo sapiens
79 HSP90AA1 3320
Affinity Capture-Luminescence Homo sapiens
80 GORASP1 64689
Two-hybrid Homo sapiens
81 SNRNP70 6625
Two-hybrid Homo sapiens
82 RXRA 6256
Two-hybrid Homo sapiens
83 TSC22D4 81628
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
84 BRD1 23774
Affinity Capture-MS Homo sapiens
85 GLRX3 10539
Two-hybrid Homo sapiens
86 VIPR1  
Affinity Capture-MS Homo sapiens
87 VPS33B 26276
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which PRKD2 is involved
PathwayEvidenceSource
Metabolism TAS Reactome
Metabolism of lipids TAS Reactome
Sphingolipid de novo biosynthesis TAS Reactome
Sphingolipid metabolism TAS Reactome





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