Gene description for Nedd4
Gene name neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
Gene symbol Nedd4
Other names/aliases Nedd4a
Species Rattus norvegicus
 Database cross references - Nedd4
ExoCarta ExoCarta_25489
Entrez Gene 25489
UniProt Q62940  
 Nedd4 identified in exosomes derived from the following tissue/cell type
Adipocytes 25998041    
Reticulocytes 21828046    
Reticulocytes 21828046    
Reticulocytes 21828046    
 Gene ontology annotations for Nedd4
Molecular Function
    sodium channel inhibitor activity GO:0019871 ISO
    phosphoserine binding GO:0050815 ISO
    RNA polymerase binding GO:0070063 ISO
    ubiquitin protein ligase activity GO:0061630 ISO
    protein C-terminus binding GO:0008022 IPI
    ubiquitin-protein transferase activity GO:0004842 IDA
    protein domain specific binding GO:0019904 ISO
    ligase activity GO:0016874 IEA
    protein binding GO:0005515 IPI
    ubiquitin binding GO:0043130 ISO
    beta-2 adrenergic receptor binding GO:0031698 ISO
    phosphothreonine binding GO:0050816 ISO
    proline-rich region binding GO:0070064 ISO
Biological Process
    negative regulation of sodium ion transmembrane transporter activity GO:2000650 ISO
    development involved in symbiotic interaction GO:0044111 ISO
    ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway GO:0043162 ISO
    protein targeting to lysosome GO:0006622 ISO
    lysosomal transport GO:0007041 ISO
    response to denervation involved in regulation of muscle adaptation GO:0014894 IEP
    endocardial cushion development GO:0003197 ISO
    regulation of membrane potential GO:0042391 ISO
    protein ubiquitination GO:0016567 ISS
    regulation of synapse organization GO:0050807 ISO
    protein ubiquitination involved in ubiquitin-dependent protein catabolic process GO:0042787 ISO
    adaptive immune response GO:0002250 ISO
    receptor catabolic process GO:0032801 ISO
    neuromuscular junction development GO:0007528 ISO
    negative regulation of vascular endothelial growth factor receptor signaling pathway GO:0030948 ISS
    positive regulation of nucleocytoplasmic transport GO:0046824 ISO
    blood vessel morphogenesis GO:0048514 ISO
    receptor internalization GO:0031623 ISO
    positive regulation of phosphatidylinositol 3-kinase signaling GO:0014068 ISO
    glucocorticoid receptor signaling pathway GO:0042921 ISO
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 ISO
    outflow tract morphogenesis GO:0003151 ISO
    regulation of ion transmembrane transport GO:0034765 ISO
    regulation of potassium ion transmembrane transporter activity GO:1901016 ISO
    protein monoubiquitination GO:0006513 ISO
    regulation of dendrite morphogenesis GO:0048814 ISO
    negative regulation of transcription from RNA polymerase II promoter in response to UV-induced DNA damage GO:0010768 ISO
    positive regulation of protein catabolic process GO:0045732 ISO
    transmission of virus GO:0019089 ISO
    negative regulation of sodium ion transport GO:0010766 ISO
    progesterone receptor signaling pathway GO:0050847 ISO
    neuron projection development GO:0031175 ISO
    T cell activation GO:0042110 ISO
    immune response GO:0006955 IEP
    cellular response to UV GO:0034644 ISO
    protein K63-linked ubiquitination GO:0070534 IDA
Subcellular Localization
    cell cortex GO:0005938 ISO
    microvillus GO:0005902 IDA
    plasma membrane GO:0005886 ISO
    Golgi apparatus GO:0005794 ISO
    extracellular exosome GO:0070062 ISO
    ubiquitin ligase complex GO:0000151 ISO
    cytoplasm GO:0005737 ISO
    membrane GO:0016020 ISO
    chromatin GO:0000785 ISO
    perinuclear region of cytoplasm GO:0048471 ISO
    cytosol GO:0005829 ISO
    membrane raft GO:0045121 IDA
 Experiment description of studies that identified Nedd4 in exosomes
1
Experiment ID 225
ISEV standards
EM
EV Biophysical techniques
GAPDH
EV Cytosolic markers
CD63
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25998041    
Organism Rattus norvegicus
Experiment description Proteomic Analysis of Extracellular Vesicles Released by Adipocytes of Otsuka Long-Evans Tokushima Fatty (OLETF) Rats.
Authors Lee JE, Moon PG, Lee IK, Baek MC
Journal name Protein J
Publication year 2015
Sample Adipocytes
Sample name Adipocytes
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
Western blotting
2
Experiment ID 94
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D4 Rep 1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
3
Experiment ID 96
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D2 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.16-1.21 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
4
Experiment ID 98
ISEV standards
EM
EV Biophysical techniques
TSG101|HSP90|HSC70
EV Cytosolic markers
MHCI
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry [Orbitrap]
PubMed ID 21828046    
Organism Rattus norvegicus
Experiment description The proteo-lipidic composition of exosomes changes during reticulocyte maturation.
Authors Carayon K, Chaoui K, Ronzier E, Lazar I, Bertrand-Michel J, Roques V, Balor S, Terce F, Lopez A, Salome L, Joly E.
Journal name JBC
Publication year 2011
Sample Reticulocytes
Sample name Reticulocytes - D7 Rep 2
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.25 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Mass spectrometry [QSTAR]
Mass spectrometry [Orbitrap]
Western blotting
 Protein-protein interactions for Nedd4
  Protein Interactor ExoCarta ID Identification method PubMed Species
No interactions are found.
 Pathways in which Nedd4 is involved
No pathways found





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