Gene ontology annotations for KLC4
Experiment description of studies that identified KLC4 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
6
Experiment ID
208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
7
Experiment ID
209
MISEV standards
✘
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
8
Experiment ID
1203
MISEV standards
✔
EM
Biophysical techniques
✔
SDCBP|FLOT1|CD9|CD81|CD63|EPCAM|GAPDH|LAMP1|TFRC|CD151|CD82|LAMP2|RAB35|TSG101|FLOT2|RAB5B|ICAM1|RAB5A
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
34887515
Organism
Homo sapiens
Experiment description
Supermeres are functional extracellular nanoparticles replete with disease biomarkers and therapeutic targets
Authors
"Zhang Q, Jeppesen DK, Higginbotham JN, Graves-Deal R, Trinh VQ, Ramirez MA, Sohn Y, Neininger AC, Taneja N, McKinley ET, Niitsu H, Cao Z, Evans R, Glass SE, Ray KC, Fissell WH, Hill S, Rose KL, Huh WJ, Washington MK, Ayers GD, Burnette DT, Sharma S, Rome LH, Franklin JL, Lee YA, Liu Q, Coffey RJ."
Journal name
Nat Cell Biol
Publication year
2021
Sample
Colorectal cancer cells
Sample name
DiFi
Isolation/purification methods
Differential centrifugation Filtration Centrifugal ultrafiltration Ultracentrifugation OptiPrep density gradient centrifugation
Flotation density
-
Molecules identified in the study
Protein miRNA
Methods used in the study
Western blotting Mass spectrometry RNA sequencing
9
Experiment ID
217
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|CD81|CD9|CD63
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23844026
Organism
Homo sapiens
Experiment description
Characterization of human thymic exosomes.
Authors
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name
PLoS One
Publication year
2013
Sample
Thymus
Sample name
Normal-Thymus
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
Protein-protein interactions for KLC4
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
Nedd4
25489
Biochemical Activity
Rattus norvegicus
2
HOOK1
Proximity Label-MS
Homo sapiens
3
NECAB2
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
4
KLC2
64837
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
COIL
Two-hybrid
Homo sapiens
6
PKP2
5318
Two-hybrid
Homo sapiens
7
NAA40
Affinity Capture-MS
Homo sapiens
8
YWHAE
7531
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
9
NUP62
23636
Affinity Capture-MS
Homo sapiens
10
SYNE4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
11
KPNA2
3838
Two-hybrid
Homo sapiens
12
CBY1
Affinity Capture-MS
Homo sapiens
13
APP
351
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
14
APEX1
328
Affinity Capture-RNA
Homo sapiens
15
DIAPH1
1729
Co-fractionation
Homo sapiens
16
KATNAL1
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
17
CEP57L1
Two-hybrid
Homo sapiens
18
COPB2
9276
Co-fractionation
Homo sapiens
19
KIF5B
3799
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
20
MEF2A
Affinity Capture-MS
Homo sapiens
21
PRC1
9055
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
22
YWHAG
7532
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
23
KRT31
3881
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
24
Klc2
Affinity Capture-MS
Mus musculus
25
YWHAH
7533
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
26
DDX6
1656
Two-hybrid
Homo sapiens
27
KPTN
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
28
MYCN
Affinity Capture-MS
Homo sapiens
29
Klc3
Affinity Capture-MS
Mus musculus
30
RBM14
10432
Two-hybrid
Homo sapiens
31
LAMTOR1
55004
Proximity Label-MS
Homo sapiens
32
YWHAB
7529
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
33
C15orf59
Affinity Capture-MS
Homo sapiens
34
KRT8
3856
Proximity Label-MS
Homo sapiens
35
KRT34
Two-hybrid
Homo sapiens
36
S100A2
6273
Affinity Capture-MS
Homo sapiens
37
KRT39
Affinity Capture-MS
Homo sapiens
38
RUFY1
80230
Co-fractionation
Homo sapiens
39
KLC1
3831
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
40
CLSTN1
22883
Affinity Capture-MS
Homo sapiens
41
TCEA2
Affinity Capture-MS
Homo sapiens
42
PRPS2
5634
Affinity Capture-MS
Homo sapiens
43
KIF5A
3798
Co-fractionation
Homo sapiens
Co-fractionation
Homo sapiens
44
SERTAD1
Two-hybrid
Homo sapiens
45
KRT16
3868
Two-hybrid
Homo sapiens
46
KLC3
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
47
NTRK1
4914
Affinity Capture-MS
Homo sapiens
48
MEOX2
Two-hybrid
Homo sapiens
49
YWHAQ
10971
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
50
ENTHD1
Affinity Capture-MS
Homo sapiens
51
PLXNA3
55558
Affinity Capture-MS
Homo sapiens
52
MYCL
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
53
ABI3
51225
Two-hybrid
Homo sapiens
54
CEP57
Two-hybrid
Homo sapiens
55
S100P
6286
Affinity Capture-MS
Homo sapiens
56
KRT33B
3884
Two-hybrid
Homo sapiens
57
AKAP9
10142
Two-hybrid
Homo sapiens
58
YWHAZ
7534
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
59
HOOK3
84376
Proximity Label-MS
Homo sapiens
60
NUP43
348995
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
61
OSBPL5
114879
Affinity Capture-MS
Homo sapiens
62
AZIN1
51582
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
63
LRRC16A
55604
Co-fractionation
Homo sapiens
64
CDR2
Affinity Capture-MS
Homo sapiens
65
KRT15
3866
Two-hybrid
Homo sapiens
66
COG6
57511
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
67
CHRNA9
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
68
TADA2A
Two-hybrid
Homo sapiens
69
NUCB1
4924
Co-fractionation
Homo sapiens
70
MTOR
2475
Affinity Capture-MS
Homo sapiens
71
USHBP1
Two-hybrid
Homo sapiens
72
PCM1
5108
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
73
KRT19
3880
Proximity Label-MS
Homo sapiens
74
MCM3AP
Affinity Capture-MS
Homo sapiens
75
KIF2B
84643
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
76
PARP16
54956
Affinity Capture-MS
Homo sapiens
77
HVCN1
84329
Affinity Capture-MS
Homo sapiens
78
TRIP6
7205
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
79
TRAK2
66008
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
80
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
81
KIF14
9928
Affinity Capture-MS
Homo sapiens
82
TRAK1
22906
Affinity Capture-MS
Homo sapiens
83
SLC16A9
Two-hybrid
Homo sapiens
84
CASK
8573
Two-hybrid
Homo sapiens
85
CLIP2
7461
Affinity Capture-MS
Homo sapiens
86
Kif5b
16573
Affinity Capture-MS
Mus musculus
87
PUF60
22827
Affinity Capture-MS
Homo sapiens
88
EPB41L2
2037
Affinity Capture-MS
Homo sapiens
89
KIF5C
3800
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
90
IARS2
55699
Affinity Capture-MS
Homo sapiens
91
BRK1
55845
Affinity Capture-MS
Homo sapiens
92
ANAPC2
29882
Proximity Label-MS
Homo sapiens
93
NLN
57486
Affinity Capture-MS
Homo sapiens
94
EZH2
Affinity Capture-MS
Homo sapiens
95
CDK9
1025
Affinity Capture-MS
Homo sapiens
96
RAB11A
8766
Proximity Label-MS
Homo sapiens
97
NDEL1
81565
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
98
UMPS
7372
Affinity Capture-MS
Homo sapiens
99
PDE4DIP
9659
Two-hybrid
Homo sapiens
100
KRT13
3860
Two-hybrid
Homo sapiens
101
CUL4A
8451
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which KLC4 is involved