Gene description for CTDSPL
Gene name CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
Gene symbol CTDSPL
Other names/aliases C3orf8
HYA22
PSR1
RBSP3
SCP3
Species Homo sapiens
 Database cross references - CTDSPL
ExoCarta ExoCarta_10217
Vesiclepedia VP_10217
Entrez Gene 10217
HGNC 16890
MIM 608592
UniProt O15194  
 CTDSPL identified in sEVs derived from the following tissue/cell type
Platelets 25332113    
Platelets 25332113    
Platelets 25332113    
Urine 19056867    
 Gene ontology annotations for CTDSPL
Molecular Function
    protein binding GO:0005515 IPI
    RNA polymerase II CTD heptapeptide repeat phosphatase activity GO:0008420 IBA
    myosin phosphatase activity GO:0017018 IEA
    calmodulin-dependent protein phosphatase activity GO:0033192 IEA
    metal ion binding GO:0046872 IEA
    histone H2AXS140 phosphatase activity GO:0140791 IEA
    RNA polymerase II CTD heptapeptide repeat Y1 phosphatase activity GO:0180004 IEA
    RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity GO:0180005 IEA
    RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity GO:0180006 IEA
    RNA polymerase II CTD heptapeptide repeat S5 phosphatase activity GO:0180007 IEA
    RNA polymerase II CTD heptapeptide repeat S7 phosphatase activity GO:0180008 IEA
    MAP kinase serine/threonine phosphatase activity GO:1990439 IEA
Biological Process
    chromatin remodeling GO:0006338 IEA
    regulation of transcription by RNA polymerase II GO:0006357 IEA
    negative regulation of G1/S transition of mitotic cell cycle GO:2000134 IEA
Subcellular Localization
    nucleus GO:0005634 IEA
    extracellular exosome GO:0070062 HDA
 Experiment description of studies that identified CTDSPL in sEVs
1
Experiment ID 231
MISEV standards
Biophysical techniques
Alix|CD63|CD9
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 1
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Lipids
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 232
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 2
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 233
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25332113    
Organism Homo sapiens
Experiment description Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors "Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name Transfusion
Publication year 2015
Sample Platelets
Sample name PL-Exs - Rep 3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Optiprep density gradient
Flotation density 1.12-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 63
MISEV standards
Biophysical techniques
AQP2
Enriched markers
Negative markers
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19056867    
Organism Homo sapiens
Experiment description Large-scale proteomics and phosphoproteomics of urinary exosomes.
Authors "Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA"
Journal name JASN
Publication year 2009
Sample Urine
Sample name Urine - Normal
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [LTQ]
Western blotting
 Protein-protein interactions for CTDSPL
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 SLC29A1 2030
Proximity Label-MS Homo sapiens
2 CLCN7 1186
Proximity Label-MS Homo sapiens
3 ZDHHC5 25921
Proximity Label-MS Homo sapiens
4 RFTN1 23180
Proximity Label-MS Homo sapiens
5 CEP89 84902
Proximity Label-MS Homo sapiens
6 ARHGAP39  
Proximity Label-MS Homo sapiens
7 TBC1D4  
Affinity Capture-MS Homo sapiens
8 ADGRL2 23266
Proximity Label-MS Homo sapiens
9 DTNA  
Proximity Label-MS Homo sapiens
10 ROBO1 6091
Proximity Label-MS Homo sapiens
11 FMN2  
Proximity Label-MS Homo sapiens
12 BASP1 10409
Proximity Label-MS Homo sapiens
13 SLC12A2 6558
Proximity Label-MS Homo sapiens
14 USP31 57478
Proximity Label-MS Homo sapiens
15 CADM1 23705
Proximity Label-MS Homo sapiens
16 CTDSP2 10106
Affinity Capture-MS Homo sapiens
17 SLC39A10 57181
Proximity Label-MS Homo sapiens
18 NUMBL 9253
Proximity Label-MS Homo sapiens
19 PACS1 55690
Proximity Label-MS Homo sapiens
20 TIAM1  
Proximity Label-MS Homo sapiens
21 MBP 4155
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
22 TULP3 7289
Proximity Label-MS Homo sapiens
23 PTPN14 5784
Proximity Label-MS Homo sapiens
24 PALM 5064
Proximity Label-MS Homo sapiens
25 ESYT2 57488
Proximity Label-MS Homo sapiens
26 SLC12A7 10723
Proximity Label-MS Homo sapiens
27 TMEM2 23670
Proximity Label-MS Homo sapiens
28 GPRIN1 114787
Proximity Label-MS Homo sapiens
29 SLC30A1 7779
Proximity Label-MS Homo sapiens
30 NF2 4771
Proximity Label-MS Homo sapiens
31 ITGA6 3655
Proximity Label-MS Homo sapiens
32 CXADR 1525
Proximity Label-MS Homo sapiens
33 C2CD4C  
Proximity Label-MS Homo sapiens
34 MCAM 4162
Proximity Label-MS Homo sapiens
35 EFR3B  
Proximity Label-MS Homo sapiens
36 CNNM3 26505
Proximity Label-MS Homo sapiens
37 ADD2 119
Proximity Label-MS Homo sapiens
38 NUMB 8650
Proximity Label-MS Homo sapiens
39 RELL1 768211
Proximity Label-MS Homo sapiens
40 ARL13B 200894
Proximity Label-MS Homo sapiens
41 CDC42EP1 11135
Proximity Label-MS Homo sapiens
42 TTC7B 145567
Proximity Label-MS Homo sapiens
43 CACHD1  
Proximity Label-MS Homo sapiens
44 PALM2  
Proximity Label-MS Homo sapiens
45 MARVELD2 153562
Proximity Label-MS Homo sapiens
46 FLVCR1 28982
Proximity Label-MS Homo sapiens
47 FAM129B 64855
Proximity Label-MS Homo sapiens
48 CDCA3 83461
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
49 SLC39A6 25800
Proximity Label-MS Homo sapiens
50 ATP2B1 490
Proximity Label-MS Homo sapiens
51 ARVCF 421
Proximity Label-MS Homo sapiens
52 TBC1D10B 26000
Proximity Label-MS Homo sapiens
53 FAM171A1 221061
Proximity Label-MS Homo sapiens
54 TJP1 7082
Proximity Label-MS Homo sapiens
55 DAB2IP 153090
Proximity Label-MS Homo sapiens
56 EGFR 1956
Proximity Label-MS Homo sapiens
57 PCDH7 5099
Proximity Label-MS Homo sapiens
58 KCNE3  
Affinity Capture-MS Homo sapiens
59 FGFR2 2263
Two-hybrid Homo sapiens
60 SLC3A2 6520
Proximity Label-MS Homo sapiens
61 AKAP5  
Proximity Label-MS Homo sapiens
62 ABCC1 4363
Proximity Label-MS Homo sapiens
63 MPZL1 9019
Proximity Label-MS Homo sapiens
64 CTNNA1 1495
Proximity Label-MS Homo sapiens
65 CCDC8  
Proximity Label-MS Homo sapiens
66 MAGEA8  
Affinity Capture-MS Homo sapiens
67 GPRIN3  
Proximity Label-MS Homo sapiens
68 KIAA1549  
Proximity Label-MS Homo sapiens
69 ITGA5 3678
Proximity Label-MS Homo sapiens
70 PVRL2 5819
Proximity Label-MS Homo sapiens
71 PSD3 23362
Proximity Label-MS Homo sapiens
72 CTDSP1 58190
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
73 SNAI1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
74 ATP2B4 493
Proximity Label-MS Homo sapiens
75 SPTBN2 6712
Proximity Label-MS Homo sapiens
76 FAM171B  
Proximity Label-MS Homo sapiens
77 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
78 KIRREL 55243
Proximity Label-MS Homo sapiens
79 PPP1R9A  
Proximity Label-MS Homo sapiens
80 MICAL3 57553
Proximity Label-MS Homo sapiens
81 SLC38A1 81539
Proximity Label-MS Homo sapiens
82 EPHA2 1969
Proximity Label-MS Homo sapiens
83 ANK3  
Proximity Label-MS Homo sapiens
84 CD44 960
Proximity Label-MS Homo sapiens
85 HSPA12A 259217
Proximity Label-MS Homo sapiens
86 NOTCH1 4851
Proximity Label-MS Homo sapiens
87 CTNND1 1500
Proximity Label-MS Homo sapiens
View the network image/svg+xml
 Pathways in which CTDSPL is involved
No pathways found





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