Gene description for NIPBL
Gene name Nipped-B homolog (Drosophila)
Gene symbol NIPBL
Other names/aliases CDLS
CDLS1
IDN3
IDN3-B
Scc2
Species Homo sapiens
 Database cross references - NIPBL
ExoCarta ExoCarta_25836
Entrez Gene 25836
HGNC 28862
MIM 608667
UniProt Q6KC79  
 NIPBL identified in exosomes derived from the following tissue/cell type
Plasma 19028452    
Urine 19056867    
 Gene ontology annotations for NIPBL
Molecular Function
    protein binding GO:0005515 IPI
    protein N-terminus binding GO:0047485 IPI
    chromatin binding GO:0003682 IEA
    protein C-terminus binding GO:0008022 IPI
    chromo shadow domain binding GO:0070087 IPI
    mediator complex binding GO:0036033 IEA
    histone deacetylase binding GO:0042826 IPI
Biological Process
    uterus morphogenesis GO:0061038 IMP
    outflow tract morphogenesis GO:0003151 IMP
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 IDA
    cognition GO:0050890 IMP
    metanephros development GO:0001656 NAS
    embryonic digestive tract morphogenesis GO:0048557 IMP
    cellular protein localization GO:0034613 IMP
    fat cell differentiation GO:0045444 IEA
    cellular response to X-ray GO:0071481 IMP
    embryonic forelimb morphogenesis GO:0035115 IMP
    eye morphogenesis GO:0048592 IMP
    mitotic sister chromatid cohesion GO:0007064 IMP
    sensory perception of sound GO:0007605 IMP
    regulation of hair cycle GO:0042634 IMP
    brain development GO:0007420 IMP
    positive regulation of ossification GO:0045778 IEA
    forelimb morphogenesis GO:0035136 IMP
    negative regulation of transcription, DNA-templated GO:0045892 IDA
    external genitalia morphogenesis GO:0035261 IMP
    maintenance of mitotic sister chromatid cohesion GO:0034088 IMP
    positive regulation of transcription from RNA polymerase II promoter GO:0045944 IEA
    embryonic viscerocranium morphogenesis GO:0048703 IEA
    positive regulation of multicellular organism growth GO:0040018 IEA
    cellular response to DNA damage stimulus GO:0006974 IMP
    mitotic cell cycle GO:0000278 TAS
    stem cell maintenance GO:0019827 IEA
    face morphogenesis GO:0060325 IMP
    positive regulation of histone deacetylation GO:0031065 IDA
    ear morphogenesis GO:0042471 IMP
    developmental growth GO:0048589 IMP
    gall bladder development GO:0061010 IMP
    regulation of developmental growth GO:0048638 IMP
    heart morphogenesis GO:0003007 IMP
    regulation of embryonic development GO:0045995 IMP
Subcellular Localization
    SMC loading complex GO:0032116 IDA
    extracellular exosome GO:0070062 IDA
    chromatin GO:0000785 IEA
    nucleoplasm GO:0005654 TAS
    nucleus GO:0005634 IDA
 Experiment description of studies that identified NIPBL in exosomes
1
Experiment ID 44
ISEV standards
IEM
EV Biophysical techniques
EV Cytosolic markers
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19028452    
Organism Homo sapiens
Experiment description Proteomic profiling of human plasma exosomes identifies PPARgamma as an exosome-associated protein.
Authors Looze C, Yui D, Leung L, Ingham M, Kaler M, Yao X, Wu WW, Shen RF, Daniels MP, Levine SJ
Journal name BBRC
Publication year 2009
Sample Plasma
Sample name Plasma
Isolation/purification methods Filtration
Size exclusion
Sucrose density gradient
Flotation density 1.15-1.16 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [LTQ]
Western blotting
Immunoelectron Microscopy
2
Experiment ID 63
ISEV standards
EV Biophysical techniques
EV Cytosolic markers
AQP2
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 19056867    
Organism Homo sapiens
Experiment description Large-scale proteomics and phosphoproteomics of urinary exosomes.
Authors Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA
Journal name JASN
Publication year 2009
Sample Urine
Sample name Urine - Normal
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry [LTQ]
Western blotting
 Protein-protein interactions for NIPBL
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 PRSS23 11098
Two-hybrid Homo sapiens
View the network image/svg+xml
 Pathways in which NIPBL is involved
PathwayEvidenceSource
Cohesin Loading onto Chromatin TAS Reactome





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