Gene description for SMAD5
Gene name SMAD family member 5
Gene symbol SMAD5
Other names/aliases DWFC
JV5-1
MADH5
Species Homo sapiens
 Database cross references - SMAD5
ExoCarta ExoCarta_4090
Entrez Gene 4090
HGNC 6771
MIM 603110
UniProt Q99717  
 SMAD5 identified in exosomes derived from the following tissue/cell type
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
 Gene ontology annotations for SMAD5
Molecular Function
    ubiquitin protein ligase binding GO:0031625 IPI
    sequence-specific DNA binding transcription factor activity GO:0003700 IEA
    protein binding GO:0005515 IPI
    metal ion binding GO:0046872 IEA
    receptor signaling protein activity GO:0005057 NAS
    RNA polymerase II core promoter sequence-specific DNA binding GO:0000979 IEA
    transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity GO:0030618 TAS
Biological Process
    bone development GO:0060348 IEA
    signal transduction GO:0007165 NAS
    positive regulation of transcription, DNA-templated GO:0045893 NAS
    cellular response to BMP stimulus GO:0071773 ISS
    erythrocyte differentiation GO:0030218 IEA
    protein phosphorylation GO:0006468 IEA
    cellular response to organic cyclic compound GO:0071407 IEA
    embryonic pattern specification GO:0009880 ISS
    Mullerian duct regression GO:0001880 IEA
    transforming growth factor beta receptor signaling pathway GO:0007179 NAS
    ureteric bud development GO:0001657 IEA
    positive regulation of osteoblast differentiation GO:0045669 IEA
    positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus GO:1901522 ISS
    BMP signaling pathway GO:0030509 TAS
    transcription, DNA-templated GO:0006351 IEA
    germ cell development GO:0007281 IEA
    cardiac muscle contraction GO:0060048 IEA
    osteoblast fate commitment GO:0002051 IEA
    intracellular signal transduction GO:0035556 TAS
    cartilage development GO:0051216 IEA
Subcellular Localization
    transcription factor complex GO:0005667 IEA
    nucleus GO:0005634 TAS
    intracellular GO:0005622 NAS
    cytoplasm GO:0005737 IDA
    nucleoplasm GO:0005654 TAS
    integral component of membrane GO:0016021 NAS
    protein complex GO:0043234 IDA
    cytosol GO:0005829 TAS
 Experiment description of studies that identified SMAD5 in exosomes
1
Experiment ID 211
ISEV standards
EM
EV Biophysical techniques
TSG101|Alix
EV Cytosolic markers
EpCAM|TFRC
EV Membrane markers
cytochrome c|GOLGA2
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K.
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
2
Experiment ID 212
ISEV standards
CEM
EV Biophysical techniques
TSG101|Alix
EV Cytosolic markers
EpCAM|TFRC
EV Membrane markers
Cytochrome C|GOLGA2
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K.
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for SMAD5
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 PPIL4  
Affinity Capture-MS Homo sapiens
2 ACVR1 90
Invivo Homo sapiens
Invivo Homo sapiens
Affinity Capture-MS Homo sapiens
3 CHMP3 51652
Affinity Capture-MS Homo sapiens
4 RBM4 5936
Affinity Capture-MS Homo sapiens
5 SNRPA 6626
Affinity Capture-MS Homo sapiens
6 TOB1  
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
7 SMAD1  
Affinity Capture-MS Homo sapiens
8 SMAD4  
Affinity Capture-MS Homo sapiens
9 BCAT1 586
Affinity Capture-MS Homo sapiens
10 PNKP 11284
Affinity Capture-MS Homo sapiens
11 CXXC5  
Affinity Capture-MS Homo sapiens
12 FLNA  
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
13 ZNF8  
Invitro Homo sapiens
Invivo Homo sapiens
Two-hybrid Homo sapiens
14 U2AF2 11338
Affinity Capture-MS Homo sapiens
15 WWP1 11059
Affinity Capture-MS Homo sapiens
16 ZFHX1B  
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
View the network image/svg+xml
 Pathways in which SMAD5 is involved
PathwayEvidenceSource
Signaling by BMP TAS Reactome





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