Gene description for SMAD2
Gene name SMAD family member 2
Gene symbol SMAD2
Other names/aliases JV18
JV18-1
MADH2
MADR2
hMAD-2
hSMAD2
Species Homo sapiens
 Database cross references - SMAD2
ExoCarta ExoCarta_4087
Vesiclepedia VP_4087
Entrez Gene 4087
HGNC 6768
MIM 601366
UniProt Q15796  
 SMAD2 identified in exosomes derived from the following tissue/cell type
Hepatocytes 26054723    
Thymus 23844026    
 Gene ontology annotations for SMAD2
Molecular Function
    I-SMAD binding GO:0070411 IPI
    double-stranded DNA binding GO:0003690 ISS
    co-SMAD binding GO:0070410 IPI
    RNA polymerase II core promoter proximal region sequence-specific DNA binding GO:0000978 IDA
    protein binding GO:0005515 IPI
    RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription GO:0001077 IDA
    enhancer binding GO:0035326 IC
    type I transforming growth factor beta receptor binding GO:0034713 IPI
    phosphatase binding GO:0019902 IPI
    metal ion binding GO:0046872 IEA
    transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity GO:0030618 IDA
    transforming growth factor beta receptor binding GO:0005160 IPI
    chromatin binding GO:0003682 IEA
    SMAD binding GO:0046332 IPI
    transcription factor binding GO:0008134 IPI
    activating transcription factor binding GO:0033613 IPI
    R-SMAD binding GO:0070412 IPI
    ubiquitin protein ligase binding GO:0031625 IPI
    DNA binding GO:0003677 IDA
    sequence-specific DNA binding transcription factor activity GO:0003700 IDA
Biological Process
    SMAD protein signal transduction GO:0060395 IEA
    pancreas development GO:0031016 IEA
    zygotic specification of dorsal/ventral axis GO:0007352 IMP
    positive regulation of transcription, DNA-templated GO:0045893 ISS
    transforming growth factor beta receptor signaling pathway GO:0007179 TAS
    response to cholesterol GO:0070723 IDA
    primary miRNA processing GO:0031053 TAS
    gene expression GO:0010467 TAS
    nodal signaling pathway GO:0038092 IMP
    common-partner SMAD protein phosphorylation GO:0007182 IDA
    positive regulation of transcription from RNA polymerase II promoter GO:0045944 TAS
    embryonic foregut morphogenesis GO:0048617 IEA
    negative regulation of transcription, DNA-templated GO:0045892 IMP
    activin receptor signaling pathway GO:0032924 IMP
    negative regulation of cell proliferation GO:0008285 IEA
    positive regulation of BMP signaling pathway GO:0030513 IMP
    regulation of binding GO:0051098 ISS
    SMAD protein complex assembly GO:0007183 IDA
    signal transduction involved in regulation of gene expression GO:0023019 IEA
    post-embryonic development GO:0009791 IEA
    lung development GO:0030324 IEA
    somatic stem cell maintenance GO:0035019 TAS
    regulation of transforming growth factor beta receptor signaling pathway GO:0017015 IMP
    ureteric bud development GO:0001657 IEA
    endoderm formation GO:0001706 IEA
    embryonic cranial skeleton morphogenesis GO:0048701 IEA
    organ growth GO:0035265 IEA
    response to glucose GO:0009749 IEA
    in utero embryonic development GO:0001701 IEA
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 TAS
    intracellular signal transduction GO:0035556 ISS
    mesoderm formation GO:0001707 ISS
    anterior/posterior pattern specification GO:0009952 ISS
    cell fate commitment GO:0045165 ISS
    transcription initiation from RNA polymerase II promoter GO:0006367 TAS
    positive regulation of epithelial to mesenchymal transition GO:0010718 ISS
    palate development GO:0060021 ISS
    gastrulation GO:0007369 TAS
    pericardium development GO:0060039 IEA
    positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry GO:1900224 IMP
    paraxial mesoderm morphogenesis GO:0048340 ISS
    insulin secretion GO:0030073 IEA
    negative regulation of transforming growth factor beta receptor signaling pathway GO:0030512 TAS
    transcription, DNA-templated GO:0006351 TAS
Subcellular Localization
    nucleoplasm GO:0005654 TAS
    nucleus GO:0005634 IDA
    cytoplasm GO:0005737 IDA
    nuclear chromatin GO:0000790 IDA
    cytosol GO:0005829 TAS
    transcription factor complex GO:0005667 IDA
    SMAD2-SMAD3 protein complex GO:0071144 IDA
    SMAD protein complex GO:0071141 IDA
    activin responsive factor complex GO:0032444 IDA
 Experiment description of studies that identified SMAD2 in exosomes
1
Experiment ID 237
MISEV standards
EM
EV Biophysical techniques
TSG101|Alix|HSC70|GAPDH
EV Enriched markers
HSP90B1
EV Negative markers
qNano
EV Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocytes
Sample name MIHA
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RNA Sequencing
2
Experiment ID 217
MISEV standards
EM
EV Biophysical techniques
TSG101|CD81|CD9|CD63
EV Enriched markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O.
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for SMAD2
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 Rps27a 78294
Affinity Capture-Luminescence Mus musculus
2 FOXH1  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
3 PARD3B 117583
Reconstituted Complex Homo sapiens
4 DVL1 1855
Reconstituted Complex Homo sapiens
5 ERBB2IP 55914
Reconstituted Complex Homo sapiens
6 INSR 3643
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
7 ZFYVE9  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
8 SKIL  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
9 Arhgef1 16801
Affinity Capture-Luminescence Mus musculus
10 Wwp2  
Affinity Capture-Luminescence Mus musculus
11 TGFBRAP1 9392
Invivo Homo sapiens
12 SKI 6497
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
13 ZFHX1B  
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
14 AXIN1  
Invivo Homo sapiens
15 Trim35  
Affinity Capture-Luminescence Mus musculus
16 Rhebl1  
Affinity Capture-Luminescence Mus musculus
17 SP1  
Invivo Homo sapiens
18 NEDD9 4739
Invivo Homo sapiens
19 HOXA9  
Invivo Homo sapiens
20 NFYC 4802
Affinity Capture-Western Homo sapiens
21 TGIF  
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
22 Lmo2  
Affinity Capture-Luminescence Mus musculus
23 CDC16 8881
Affinity Capture-Western Homo sapiens
24 Rhobtb1  
Affinity Capture-Luminescence Mus musculus
25 Smad2  
Affinity Capture-Luminescence Mus musculus
26 SMAD3 4088
Affinity Capture-Western Homo sapiens
27 SMAD4  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
28 Rhoj  
Affinity Capture-Luminescence Mus musculus
29 HDAC1 3065
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
30 Arhgef6  
Affinity Capture-Luminescence Mus musculus
31 PIAS3  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
32 PIAS4  
Affinity Capture-Western Homo sapiens
33 ARL4D  
Affinity Capture-Luminescence Mus musculus
34 ZEB1  
Affinity Capture-Western Homo sapiens
35 ESR1  
Invitro Homo sapiens
36 STRAP 11171
Invivo Homo sapiens
Invitro Homo sapiens
37 Rab38  
Affinity Capture-Luminescence Mus musculus
38 JUN 3725
Invivo Homo sapiens
Invitro Homo sapiens
Affinity Capture-Western Homo sapiens
39 HNF4A  
Invivo Homo sapiens
40 BRCA2 675
Affinity Capture-Western Homo sapiens
41 Fbxo3  
Affinity Capture-Luminescence Mus musculus
42 SNIP1  
Two-hybrid Homo sapiens
43 DAB2 1601
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
44 Rasd2  
Affinity Capture-Luminescence Mus musculus
45 CRI2  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
46 Cdc40  
Affinity Capture-Luminescence Mus musculus
47 CTNNB1 1499
Affinity Capture-Western Homo sapiens
48 Map2k3  
Affinity Capture-Luminescence Mus musculus
49 Uhmk1  
Affinity Capture-Luminescence Mus musculus
50 GLI3 2737
Invitro Homo sapiens
51 ANAPC10  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
52 RUNX2  
Invitro Homo sapiens
53 Rhod  
Affinity Capture-Luminescence Mus musculus
54 Sqstm1  
Affinity Capture-Luminescence Mus musculus
55 Rab34  
Affinity Capture-Luminescence Mus musculus
56 MEF2A  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
57 Irak2  
Affinity Capture-Luminescence Mus musculus
58 HIPK2 28996
Reconstituted Complex Homo sapiens
59 Arhgef7  
Affinity Capture-Luminescence Mus musculus
60 SNW1 22938
Invitro Homo sapiens
Two-hybrid Homo sapiens
61 Lhx9  
Affinity Capture-Luminescence Mus musculus
62 PML 5371
Affinity Capture-Western Homo sapiens
63 Rgs3  
Affinity Capture-Luminescence Mus musculus
64 Smad3  
Affinity Capture-Luminescence Mus musculus
65 SMURF2 64750
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
66 MYC  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
67 LEF1  
Invivo Homo sapiens
Invitro Homo sapiens
68 AKT1 207
Affinity Capture-Western Homo sapiens
69 MEF2C  
Reconstituted Complex Homo sapiens
70 CAMK2G 818
Biochemical Activity Homo sapiens
71 Sip1  
Two-hybrid Mus musculus
72 Ppp2r2d  
Affinity Capture-Luminescence Mus musculus
73 ZNF8  
Invitro Homo sapiens
Invivo Homo sapiens
Two-hybrid Homo sapiens
74 EP300 2033
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
75 CDC27 996
Affinity Capture-Western Homo sapiens
76 1200013B22Rik  
Affinity Capture-Luminescence Mus musculus
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here