Gene description for JUN
Gene name jun proto-oncogene
Gene symbol JUN
Other names/aliases AP-1
AP1
c-Jun
Species Homo sapiens
 Database cross references - JUN
ExoCarta ExoCarta_3725
Vesiclepedia VP_3725
Entrez Gene 3725
HGNC 6204
MIM 165160
UniProt P05412  
 JUN identified in exosomes derived from the following tissue/cell type
Endothelial cells 26027894    
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for JUN
Molecular Function
    poly(A) RNA binding GO:0044822 IDA
    RNA polymerase II activating transcription factor binding GO:0001102 IPI
    RNA polymerase II core promoter proximal region sequence-specific DNA binding GO:0000978 IBA
    GTPase activator activity GO:0005096 IDA
    protein binding GO:0005515 IPI
    double-stranded DNA binding GO:0003690 IEA
    RNA polymerase II distal enhancer sequence-specific DNA binding GO:0000980 IDA
    cAMP response element binding GO:0035497 IDA
    sequence-specific DNA binding transcription factor activity GO:0003700 IDA
    transcription factor binding GO:0008134 IPI
    DNA binding GO:0003677 TAS
    RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity GO:0003705 IDA
    RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription GO:0001077 IEA
    transcription regulatory region DNA binding GO:0044212 IDA
    RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription GO:0001190 IC
    enzyme binding GO:0019899 IPI
    R-SMAD binding GO:0070412 IPI
    sequence-specific DNA binding RNA polymerase II transcription factor activity GO:0000981 IC
    HMG box domain binding GO:0071837 IEA
    transcription coactivator activity GO:0003713 IDA
Biological Process
    learning GO:0007612 IEA
    liver development GO:0001889 IEA
    membrane depolarization GO:0051899 IEA
    response to cAMP GO:0051591 IBA
    positive regulation of DNA replication GO:0045740 IEA
    positive regulation by host of viral transcription GO:0043923 IDA
    toll-like receptor 4 signaling pathway GO:0034142 TAS
    regulation of cell death GO:0010941 IBA
    positive regulation of cell differentiation GO:0045597 IBA
    regulation of cell proliferation GO:0042127 IBA
    innate immune response GO:0045087 TAS
    negative regulation of transcription, DNA-templated GO:0045892 IDA
    negative regulation of neuron apoptotic process GO:0043524 IEA
    negative regulation by host of viral transcription GO:0043922 IDA
    positive regulation of transcription from RNA polymerase II promoter GO:0045944 IDA
    transforming growth factor beta receptor signaling pathway GO:0007179 IDA
    toll-like receptor 2 signaling pathway GO:0034134 TAS
    monocyte differentiation GO:0030224 IEA
    negative regulation of protein autophosphorylation GO:0031953 IEA
    positive regulation of DNA-templated transcription, initiation GO:2000144 IDA
    Fc-epsilon receptor signaling pathway GO:0038095 TAS
    toll-like receptor 10 signaling pathway GO:0034166 TAS
    cellular response to potassium ion starvation GO:0051365 IEA
    SMAD protein import into nucleus GO:0007184 IDA
    response to lipopolysaccharide GO:0032496 IBA
    negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress GO:1990441 IMP
    negative regulation of DNA binding GO:0043392 IDA
    positive regulation of fibroblast proliferation GO:0048146 IEA
    negative regulation of cell proliferation GO:0008285 IEA
    toll-like receptor 3 signaling pathway GO:0034138 TAS
    MyD88-independent toll-like receptor signaling pathway GO:0002756 TAS
    outflow tract morphogenesis GO:0003151 IEA
    positive regulation of smooth muscle cell proliferation GO:0048661 IEA
    positive regulation of neuron apoptotic process GO:0043525 IEA
    positive regulation of transcription, DNA-templated GO:0045893 IDA
    toll-like receptor 9 signaling pathway GO:0034162 TAS
    regulation of cell cycle GO:0051726 IBA
    circadian rhythm GO:0007623 IEA
    SMAD protein signal transduction GO:0060395 IDA
    stress-activated MAPK cascade GO:0051403 TAS
    toll-like receptor signaling pathway GO:0002224 TAS
    positive regulation of monocyte differentiation GO:0045657 IEA
    response to radiation GO:0009314 IBA
    release of cytochrome c from mitochondria GO:0001836 IEA
    toll-like receptor 5 signaling pathway GO:0034146 TAS
    cellular response to hormone stimulus GO:0032870 IBA
    toll-like receptor TLR6:TLR2 signaling pathway GO:0038124 TAS
    response to cytokine GO:0034097 IBA
    axon regeneration GO:0031103 IEA
    response to drug GO:0042493 IBA
    response to hydrogen peroxide GO:0042542 IEA
    aging GO:0007568 IEA
    transcription from RNA polymerase II promoter GO:0006366 IEA
    positive regulation of endothelial cell proliferation GO:0001938 IEA
    angiogenesis GO:0001525 IEA
    toll-like receptor TLR1:TLR2 signaling pathway GO:0038123 TAS
    regulation of sequence-specific DNA binding transcription factor activity GO:0051090 TAS
    TRIF-dependent toll-like receptor signaling pathway GO:0035666 TAS
    positive regulation of GTPase activity GO:0043547 IDA
    microglial cell activation GO:0001774 IEA
    MyD88-dependent toll-like receptor signaling pathway GO:0002755 TAS
    leading edge cell differentiation GO:0035026 IEA
    cellular response to calcium ion GO:0071277 IEA
    response to mechanical stimulus GO:0009612 IBA
Subcellular Localization
    transcriptional repressor complex GO:0017053 IEA
    nuclear chromosome GO:0000228 TAS
    cytosol GO:0005829 IEA
    transcription factor complex GO:0005667 IBA
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 TAS
    nuclear euchromatin GO:0005719 IDA
 Experiment description of studies that identified JUN in exosomes
1
Experiment ID 226
MISEV standards
EM
EV Biophysical techniques
GAPDH|CD9|FLOT1
EV Enriched markers
LMNA|H2AFX|ATP5A1|TOMM20
EV Negative markers
EV Particle analysis
Identified molecule mRNA
Identification method Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
PubMed ID 26027894    
Organism Homo sapiens
Experiment description Quantitative and qualitative analysis of small RNAs in human endothelial cells and exosomes provides insights into localized RNA processing, degradation and sorting
Authors Bas W. M. van Balkom, Almut S. Eisele, D. Michiel Pegtel, Sander Bervoets, Marianne C. Verhaar
Journal name Journal of Extracellular Vesicles
Publication year 2015
Sample Endothelial cells
Sample name HMEC-1
Isolation/purification methods Differential ultracentrifugation
Sucrose density gradient
Flotation density 1.10 g/mL
Molecules identified in the study miRNA
Protein
snoRNA
lncRNA
yRNA
snRNA
mRNA
ncRNA
mtRNA
vtRNA
scaRNA
lincRNA
Methods used in the study Small RNA sequencing (Illumina HiSeq 2000 (Solexa)
Western blotting
2
Experiment ID 235
MISEV standards
EM
EV Biophysical techniques
TSG101|Alix|HSC70|GAPDH
EV Enriched markers
HSP90B1
EV Negative markers
qNano
EV Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for JUN
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 GTF2F1 2962
Reconstituted Complex Homo sapiens
2 NCOA6  
Reconstituted Complex Homo sapiens
3 RAGE  
Invitro Homo sapiens
4 NFE2L1  
Invitro Homo sapiens
5 SKI 6497
Affinity Capture-Western Homo sapiens
6 DDX21 9188
Affinity Capture-MS Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
7 SP1  
Invitro Homo sapiens
Invivo Homo sapiens
8 NACA 4666
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
9 GATA2  
Invitro Homo sapiens
10 EN1  
Invitro Homo sapiens
Two-hybrid Homo sapiens
11 BRCA1 672
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
12 CSNK2A1 1457
Reconstituted Complex Homo sapiens
Far Western Homo sapiens
13 TAF1  
Invitro Homo sapiens
14 MYOD1  
Invitro Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
Invivo Homo sapiens
15 TOP2A 7153
Invivo Homo sapiens
16 HDAC3 8841
Affinity Capture-Western Homo sapiens
17 SPIB  
Reconstituted Complex Homo sapiens
18 GTF2F2 2963
Reconstituted Complex Homo sapiens
19 COPS5 10987
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
20 STAT3 6774
Invivo Homo sapiens
Invitro Homo sapiens
21 HMGA1 3159
Invitro Homo sapiens
22 VDR  
Reconstituted Complex Homo sapiens
23 SPI1  
Reconstituted Complex Homo sapiens
Invivo Homo sapiens
24 SARS 6301
Affinity Capture-Western Homo sapiens
25 NCOA1  
Invitro Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
26 RUNX1  
Invitro Homo sapiens
27 RB1 5925
Invitro Homo sapiens
Invivo Homo sapiens
28 TGIF  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
29 VAV1 7409
Biochemical Activity Homo sapiens
30 MAPK3 5595
Biochemical Activity Homo sapiens
31 Smarca2  
Affinity Capture-Western Mus musculus
32 BATF  
Invitro Homo sapiens
Two-hybrid Homo sapiens
33 ATF4  
Invitro Homo sapiens
34 ATF2  
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
Affinity Capture-Western Homo sapiens
35 UBE2I 7329
Two-hybrid Homo sapiens
36 SMAD3 4088
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
37 SMAD2 4087
Affinity Capture-Western Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
38 BCL6  
Invivo Homo sapiens
Invitro Homo sapiens
39 PML 5371
Invivo Homo sapiens
40 DHX9 1660
Affinity Capture-MS Homo sapiens
41 MAPK8 5599
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
42 ATF3  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
43 RBM39 9584
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
44 Senp2  
Phenotypic Enhancement Mus musculus
45 NR3C1 2908
Invivo Homo sapiens
Invitro Homo sapiens
Reconstituted Complex Homo sapiens
46 PRKD1 5587
Biochemical Activity Homo sapiens
47 BCL3  
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
48 FOSL2  
Two-hybrid Homo sapiens
49 TBP  
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
50 JUN 3725
Invitro Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Invitro Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
51 FOS 2353
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
Reconstituted Complex Homo sapiens
Co-crystal Structure Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
52 ERG  
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
53 CSNK2A2 1459
Reconstituted Complex Homo sapiens
Far Western Homo sapiens
54 RUNX2  
Invivo Homo sapiens
Invivo Homo sapiens
Invitro Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
55 ETS1  
Invitro Homo sapiens
56 MYBBP1A 10514
Invitro Homo sapiens
57 NR5A1  
Invitro Homo sapiens
58 NFYA 4800
Invivo Homo sapiens
59 NELFB 25920
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
60 TSC22D3  
Reconstituted Complex Homo sapiens
61 HIF1A 3091
Affinity Capture-Western Homo sapiens
62 STAT4  
Affinity Capture-Western Homo sapiens
63 RELA 5970
Two-hybrid Homo sapiens
Phenotypic Enhancement Homo sapiens
64 HHEX  
Invitro Homo sapiens
Two-hybrid Homo sapiens
65 RFWD2  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
66 FOSL1  
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
67 PIN1 5300
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
68 HNRNPM 4670
Affinity Capture-MS Homo sapiens
69 POU1F1  
Reconstituted Complex Homo sapiens
70 SMAD4  
Invitro Homo sapiens
71 CREBBP  
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
72 ATF1  
Invitro Homo sapiens
73 GTF2B 2959
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
74 Smarcb1  
Affinity Capture-Western Mus musculus
75 CREB5 9586
Reconstituted Complex Homo sapiens
76 ESR1  
Invitro Homo sapiens
77 DDIT3 1649
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
78 PHOX2A  
Reconstituted Complex Homo sapiens
79 ETS2  
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
80 TRIP4 9325
Invivo Homo sapiens
81 TCF20  
Reconstituted Complex Homo sapiens
82 STAT1 6772
Invivo Homo sapiens
83 NRIP1 8204
Reconstituted Complex Homo sapiens
84 AR 367
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
85 MAF  
Invivo Homo sapiens
Invitro Homo sapiens
86 GTF2E2  
Reconstituted Complex Homo sapiens
View the network image/svg+xml



Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here