Gene description for RBM39
Gene name RNA binding motif protein 39
Gene symbol RBM39
Other names/aliases CAPER
CAPERalpha
FSAP59
HCC1
RNPC2
Species Homo sapiens
 Database cross references - RBM39
ExoCarta ExoCarta_9584
Entrez Gene 9584
HGNC 15923
MIM 604739
UniProt Q14498  
 RBM39 identified in exosomes derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for RBM39
Molecular Function
    poly(A) RNA binding GO:0044822 IDA
    protein binding GO:0005515 IPI
    nucleotide binding GO:0000166 IEA
Biological Process
    RNA splicing GO:0008380 IEA
    transcription, DNA-templated GO:0006351 IEA
    mRNA processing GO:0006397 IEA
    regulation of transcription, DNA-templated GO:0006355 IEA
    RNA processing GO:0006396 TAS
Subcellular Localization
    nuclear speck GO:0016607 IEA
    microtubule organizing center GO:0005815 IDA
    nucleoplasm GO:0005654 IDA
    microtubule cytoskeleton GO:0015630 IDA
 Experiment description of studies that identified RBM39 in exosomes
1
Experiment ID 217
ISEV standards
EM
EV Biophysical techniques
TSG101
EV Cytosolic markers
CD81|CD9|CD63
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O.
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for RBM39
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ESR1  
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
2 ESR2  
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
3 JUN 3725
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
View the network image/svg+xml
 Pathways in which RBM39 is involved
No pathways found





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