Gene description for BARD1
Gene name BRCA1 associated RING domain 1
Gene symbol BARD1
Other names/aliases -
Species Homo sapiens
 Database cross references - BARD1
ExoCarta ExoCarta_580
Vesiclepedia VP_580
Entrez Gene 580
HGNC 952
MIM 601593
UniProt Q99728  
 BARD1 identified in exosomes derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for BARD1
Molecular Function
    RNA binding GO:0003723 IDA
    ubiquitin-protein transferase activity GO:0004842 IBA
    ubiquitin-protein transferase activity GO:0004842 IDA
    ubiquitin-protein transferase activity GO:0004842 NAS
    protein binding GO:0005515 IPI
    kinase binding GO:0019900 NAS
    protein homodimerization activity GO:0042803 IPI
    metal ion binding GO:0046872 IEA
    protein heterodimerization activity GO:0046982 IPI
    ubiquitin-modified histone reader activity GO:0061649 TAS
    histone H2AK127 ubiquitin ligase activity GO:0140863 TAS
    histone H2AK129 ubiquitin ligase activity GO:0140864 TAS
Biological Process
    tissue homeostasis GO:0001894 TAS
    DNA repair GO:0006281 NAS
    regulation of DNA repair GO:0006282 NAS
    chromatin remodeling GO:0006338 TAS
    regulation of transcription by RNA polymerase II GO:0006357 TAS
    DNA damage response GO:0006974 NAS
    protein ubiquitination GO:0016567 NAS
    negative regulation of mRNA 3'-end processing GO:0031441 NAS
    homologous recombination GO:0035825 NAS
    regulation of phosphorylation GO:0042325 IMP
    positive regulation of apoptotic process GO:0043065 IMP
    negative regulation of apoptotic process GO:0043066 IMP
    mitotic G2/M transition checkpoint GO:0044818 NAS
    positive regulation of protein catabolic process GO:0045732 NAS
    negative regulation of cell cycle GO:0045786 NAS
    negative regulation of protein export from nucleus GO:0046826 IDA
    regulation of cell cycle GO:0051726 NAS
    cellular response to ionizing radiation GO:0071479 IMP
    protein K6-linked ubiquitination GO:0085020 IBA
    protein K6-linked ubiquitination GO:0085020 IDA
    DNA strand resection involved in replication fork processing GO:0110025 NAS
    regulation of DNA damage checkpoint GO:2000001 NAS
Subcellular Localization
    ubiquitin ligase complex GO:0000151 NAS
    nuclear ubiquitin ligase complex GO:0000152 IDA
    nucleus GO:0005634 IDA
    nucleus GO:0005634 IMP
    nucleus GO:0005634 NAS
    nucleoplasm GO:0005654 IDA
    nucleoplasm GO:0005654 TAS
    cytoplasm GO:0005737 IDA
    nuclear speck GO:0016607 IDA
    BRCA1-BARD1 complex GO:0031436 IBA
    BRCA1-BARD1 complex GO:0031436 IDA
    BRCA1-BARD1 complex GO:0031436 IPI
    cytoplasmic ribonucleoprotein granule GO:0036464 IDA
    BRCA1-A complex GO:0070531 IBA
    BRCA1-A complex GO:0070531 IDA
    BRCA1-A complex GO:0070531 NAS
    BRCA1-B complex GO:0070532 IPI
    BRCA1-C complex GO:0070533 IPI
 Experiment description of studies that identified BARD1 in exosomes
1
Experiment ID 234
MISEV standards
EM
Biophysical techniques
TSG101|Alix|HSC70|GAPDH
Enriched markers
HSP90B1
Negative markers
qNano
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-C3
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for BARD1
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 POLR2B 5431
Affinity Capture-MS Homo sapiens
2 RNGTT 8732
Affinity Capture-MS Homo sapiens
3 ZFP64  
Two-hybrid Homo sapiens
4 HIST2H2BE 8349
Affinity Capture-MS Homo sapiens
5 VPS35 55737
Affinity Capture-MS Homo sapiens
6 HNRNPC 3183
Protein-RNA Homo sapiens
Affinity Capture-MS Homo sapiens
7 NPC2 10577
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
8 LDOC1  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
9 SNX3 8724
Two-hybrid Homo sapiens
10 KPNA3 3839
Affinity Capture-MS Homo sapiens
11 XIST  
Co-localization Homo sapiens
12 BCL2  
Co-localization Homo sapiens
13 MED17  
Co-purification Homo sapiens
14 RBMY2BP  
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
15 UBE2K 3093
Reconstituted Complex Homo sapiens
16 MSH6 2956
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
17 TCEB3 6924
Affinity Capture-MS Homo sapiens
18 PGAM5 192111
Affinity Capture-MS Homo sapiens
19 ING5  
Two-hybrid Homo sapiens
20 TOP2B 7155
Affinity Capture-Western Homo sapiens
21 ATP1B1 481
Two-hybrid Homo sapiens
22 HNRNPDL 9987
Affinity Capture-MS Homo sapiens
23 CAP1 10487
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
24 FAM9B  
Two-hybrid Homo sapiens
25 BRCA1 672
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Co-localization Homo sapiens
Co-localization Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
FRET Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Co-localization Homo sapiens
Two-hybrid Homo sapiens
Co-crystal Structure Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Biochemical Activity Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Co-localization Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Co-localization Homo sapiens
Affinity Capture-Western Homo sapiens
PCA Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Co-crystal Structure Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Co-localization Homo sapiens
Two-hybrid Homo sapiens
Co-crystal Structure Homo sapiens
Two-hybrid Homo sapiens
PCA Homo sapiens
Co-localization Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
26 UBE3A 7337
Reconstituted Complex Homo sapiens
27 HIST1H2BB 3018
Biochemical Activity Homo sapiens
Co-crystal Structure Homo sapiens
28 SSB 6741
Affinity Capture-MS Homo sapiens
29 CRIPAK  
Two-hybrid Homo sapiens
30 DHX57 90957
Affinity Capture-MS Homo sapiens
31 SCAF4 57466
Affinity Capture-MS Homo sapiens
32 HIST1H3A 8350
Affinity Capture-Western Homo sapiens
33 SRSF2 6427
Two-hybrid Homo sapiens
34 PRPF40A 55660
Affinity Capture-MS Homo sapiens
35 WDR26 80232
Affinity Capture-MS Homo sapiens
36 MSH3 4437
Reconstituted Complex Homo sapiens
37 SETDB1  
Two-hybrid Homo sapiens
38 MOB4 25843
Affinity Capture-MS Homo sapiens
39 AKAP8L  
Affinity Capture-MS Homo sapiens
40 HNRNPUL2 221092
Affinity Capture-MS Homo sapiens
41 KAT7  
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
42 CCNK  
Affinity Capture-MS Homo sapiens
43 CPSF2 53981
Affinity Capture-MS Homo sapiens
44 RPS20 6224
Two-hybrid Homo sapiens
45 SNRNP70 6625
Affinity Capture-MS Homo sapiens
46 NCBP1 4686
Affinity Capture-MS Homo sapiens
47 YWHAZ 7534
Affinity Capture-MS Homo sapiens
48 PDXK 8566
Two-hybrid Homo sapiens
49 POLR2E 5434
Affinity Capture-MS Homo sapiens
50 CEP70  
Two-hybrid Homo sapiens
51 UBE2E2  
Reconstituted Complex Homo sapiens
52 KRT40  
Two-hybrid Homo sapiens
53 LAS1L 81887
Affinity Capture-MS Homo sapiens
54 RNF8  
Affinity Capture-Western Homo sapiens
55 EXOC5 10640
Two-hybrid Homo sapiens
56 CDK12 51755
Affinity Capture-MS Homo sapiens
57 PIAS4  
Two-hybrid Homo sapiens
58 BRCC3 79184
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
59 RBM22 55696
Affinity Capture-MS Homo sapiens
60 NPM1 4869
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
61 MDC1  
Affinity Capture-Western Homo sapiens
62 SNRPC 6631
Affinity Capture-MS Homo sapiens
63 TULP2  
Two-hybrid Homo sapiens
64 CCAR1 55749
Affinity Capture-MS Homo sapiens
65 KRI1  
Affinity Capture-MS Homo sapiens
66 EWSR1 2130
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
FRET Homo sapiens
Two-hybrid Homo sapiens
67 MCM6 4175
Affinity Capture-MS Homo sapiens
68 HMGA1 3159
Affinity Capture-MS Homo sapiens
69 SRSF1 6426
Affinity Capture-MS Homo sapiens
70 TRA2A 29896
Affinity Capture-MS Homo sapiens
71 RAD51  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
72 BEND3  
Affinity Capture-MS Homo sapiens
73 SMCHD1 23347
Two-hybrid Homo sapiens
74 HERC2 8924
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
75 HIST2H2AC 8338
Biochemical Activity Homo sapiens
76 MICAL3 57553
Affinity Capture-MS Homo sapiens
77 FBXO5  
Affinity Capture-Western Homo sapiens
78 HAP1  
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
79 ZNF768 79724
Affinity Capture-MS Homo sapiens
80 HP1BP3 50809
Affinity Capture-MS Homo sapiens
81 UBE2W  
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
82 TRAPPC11 60684
Two-hybrid Homo sapiens
83 CHD3 1107
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
84 SMARCB1 6598
Affinity Capture-Western Homo sapiens
85 SMARCA2 6595
Affinity Capture-Western Homo sapiens
86 GNPAT 8443
Affinity Capture-MS Homo sapiens
87 AKIP1  
Two-hybrid Homo sapiens
88 CBX1 10951
Reconstituted Complex Homo sapiens
89 MTA2 9219
Affinity Capture-MS Homo sapiens
90 UIMC1  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
91 ERCC6L 54821
Affinity Capture-MS Homo sapiens
92 TRA2B 6434
Affinity Capture-MS Homo sapiens
93 TBC1D1 23216
Affinity Capture-MS Homo sapiens
94 SAMHD1 25939
Affinity Capture-MS Homo sapiens
95 GOLGA2 2801
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
96 MAPK1 5594
Affinity Capture-MS Homo sapiens
97 AURKA 6790
Affinity Capture-Western Homo sapiens
98 UBE2E3 10477
Reconstituted Complex Homo sapiens
99 GEMIN5 25929
Affinity Capture-MS Homo sapiens
100 POMZP3  
Two-hybrid Homo sapiens
101 MTUS2 23281
Two-hybrid Homo sapiens
102 CDKN2AIP  
Affinity Capture-MS Homo sapiens
103 BRIP1  
Affinity Capture-Western Homo sapiens
Protein-peptide Homo sapiens
104 LUC7L 55692
Affinity Capture-MS Homo sapiens
105 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
106 UBE2T  
Affinity Capture-MS Homo sapiens
107 MRE11A 4361
Affinity Capture-Western Homo sapiens
108 SRPK2 6733
Affinity Capture-MS Homo sapiens
109 MEPCE 56257
Affinity Capture-MS Homo sapiens
110 NOM1  
Affinity Capture-MS Homo sapiens
111 HMGN2 3151
Affinity Capture-MS Homo sapiens
112 NR1H3  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
113 CSTF2 1478
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
114 BRE 9577
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
115 NBN 4683
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
116 LRIF1  
Two-hybrid Homo sapiens
117 SRSF6 6431
Affinity Capture-MS Homo sapiens
118 CBX3 11335
PCA Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
119 SNRNP200 23020
Two-hybrid Homo sapiens
120 WDR61 80349
Two-hybrid Homo sapiens
121 RBM17 84991
Affinity Capture-MS Homo sapiens
122 BRCA2 675
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
123 SNRPB 6628
Affinity Capture-MS Homo sapiens
124 UBR5 51366
Two-hybrid Homo sapiens
125 DDX20 11218
Affinity Capture-MS Homo sapiens
126 GIT1 28964
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
127 BARD1 580
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Biochemical Activity Homo sapiens
Reconstituted Complex Homo sapiens
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
Reconstituted Complex Homo sapiens
Co-purification Homo sapiens
Biochemical Activity Homo sapiens
Reconstituted Complex Homo sapiens
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
128 ND1  
Two-hybrid Homo sapiens
129 CIRBP 1153
Affinity Capture-MS Homo sapiens
130 DRG1 4733
Affinity Capture-MS Homo sapiens
131 DCAF7 10238
Affinity Capture-MS Homo sapiens
132 CBX5 23468
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
133 U2AF2 11338
Affinity Capture-MS Homo sapiens
134 UBE2U  
Two-hybrid Homo sapiens
135 AP1B1 162
Two-hybrid Homo sapiens
136 CPSF6 11052
Affinity Capture-MS Homo sapiens
137 LUC7L2 51631
Affinity Capture-MS Homo sapiens
138 TACC1 6867
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
139 GTF3C1  
Affinity Capture-MS Homo sapiens
140 SMC1A 8243
Co-purification Homo sapiens
141 UBE2D3 7323
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
142 HECTD1 25831
Affinity Capture-MS Homo sapiens
143 RBBP8  
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Co-purification Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
144 DDX39B 7919
Two-hybrid Homo sapiens
145 SCAF11  
Affinity Capture-MS Homo sapiens
146 H2AFX 3014
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
147 PPM1G 5496
Affinity Capture-MS Homo sapiens
148 SRPK1 6732
Affinity Capture-MS Homo sapiens
149 U2AF1 7307
Affinity Capture-MS Homo sapiens
150 CCNT1  
Affinity Capture-MS Homo sapiens
151 PCBP2 5094
Two-hybrid Homo sapiens
152 LARP1 23367
Affinity Capture-MS Homo sapiens
153 NPM3 10360
Affinity Capture-MS Homo sapiens
154 BCLAF1 9774
Affinity Capture-MS Homo sapiens
155 HNRNPLL 92906
Two-hybrid Homo sapiens
156 PTN  
Two-hybrid Homo sapiens
157 BRD7  
Two-hybrid Homo sapiens
158 NUMA1 4926
Affinity Capture-MS Homo sapiens
159 UBE2N 7334
Reconstituted Complex Homo sapiens
160 NKRF 55922
Affinity Capture-MS Homo sapiens
161 OLA1 29789
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
162 RBM39 9584
Affinity Capture-MS Homo sapiens
163 CSTF1 1477
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
Reconstituted Complex Homo sapiens
164 FANCD2  
Affinity Capture-MS Homo sapiens
165 CCDC88A 55704
Affinity Capture-MS Homo sapiens
166 CDK9 1025
Affinity Capture-MS Homo sapiens
167 POLR2H 5437
Affinity Capture-Western Homo sapiens
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
168 MSH2 4436
Reconstituted Complex Homo sapiens
169 ZHX1  
Two-hybrid Homo sapiens
170 SLFN11 91607
Affinity Capture-MS Homo sapiens
171 YBX1 4904
Affinity Capture-MS Homo sapiens
172 PNN 5411
Affinity Capture-MS Homo sapiens
173 SRSF4 6429
Affinity Capture-MS Homo sapiens
174 GTSE1 51512
Affinity Capture-MS