Gene description for YIF1A
Gene name Yip1 interacting factor homolog A (S. cerevisiae)
Gene symbol YIF1A
Other names/aliases 54TM
FinGER7
YIF1
YIF1P
Species Homo sapiens
 Database cross references - YIF1A
ExoCarta ExoCarta_10897
Vesiclepedia VP_10897
Entrez Gene 10897
HGNC 16688
MIM 611484
UniProt O95070  
 YIF1A identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Mesenchymal stem cells 36408942    
 Gene ontology annotations for YIF1A
Molecular Function
    protein binding GO:0005515 IPI
Biological Process
    endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006888 IBA
    protein transport GO:0015031 IEA
Subcellular Localization
    Golgi membrane GO:0000139 IBA
    endoplasmic reticulum membrane GO:0005789 IBA
    endoplasmic reticulum membrane GO:0005789 TAS
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 IBA
    endoplasmic reticulum-Golgi intermediate compartment GO:0005793 IDA
    Golgi apparatus GO:0005794 IDA
    COPII-coated ER to Golgi transport vesicle GO:0030134 IBA
    endoplasmic reticulum-Golgi intermediate compartment membrane GO:0033116 IEA
    intracellular membrane-bounded organelle GO:0043231 IDA
 Experiment description of studies that identified YIF1A in exosomes
1
Experiment ID 489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
5
Experiment ID 488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Homo sapiens
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Mesenchymal stem cells
Sample name UCMSC
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for YIF1A
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 GJD3  
Proximity Label-MS Homo sapiens
2 VAPA 9218
Affinity Capture-MS Homo sapiens
3 LAMP3  
Proximity Label-MS Homo sapiens
4 ATP13A2  
Two-hybrid Homo sapiens
Affinity Capture-Western Homo sapiens
5 PCDHGB4 8641
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
6 BSCL2  
Affinity Capture-MS Homo sapiens
7 PTPN9 5780
Two-hybrid Homo sapiens
8 ZFYVE21  
Two-hybrid Homo sapiens
9 TMEM9B 56674
Affinity Capture-MS Homo sapiens
10 CD79A  
Two-hybrid Homo sapiens
11 APEX1 328
Affinity Capture-RNA Homo sapiens
12 B3GAT1  
Proximity Label-MS Homo sapiens
13 LSS 4047
Two-hybrid Homo sapiens
14 TIMMDC1  
Two-hybrid Homo sapiens
15 C4orf3  
Two-hybrid Homo sapiens
16 SEC24C 9632
Affinity Capture-MS Homo sapiens
17 VKORC1 79001
Two-hybrid Homo sapiens
18 SSR1 6745
Proximity Label-MS Homo sapiens
19 MARCH5  
Two-hybrid Homo sapiens
20 TMEM17  
Two-hybrid Homo sapiens
21 GPX8 493869
Two-hybrid Homo sapiens
22 MLLT1 4298
Two-hybrid Homo sapiens
23 NCSTN 23385
Affinity Capture-MS Homo sapiens
24 SLAMF7  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
25 MTERF3  
Two-hybrid Homo sapiens
26 NUP155 9631
Proximity Label-MS Homo sapiens
27 KIAA1715 80856
Two-hybrid Homo sapiens
28 ZDHHC17 23390
Two-hybrid Homo sapiens
29 DPEP2  
Affinity Capture-MS Homo sapiens
30 RNF144A  
Two-hybrid Homo sapiens
31 TMEM14B  
Two-hybrid Homo sapiens
32 C19orf38  
Affinity Capture-MS Homo sapiens
33 EMD 2010
Proximity Label-MS Homo sapiens
34 REEP4  
Two-hybrid Homo sapiens
35 CST6  
Two-hybrid Homo sapiens
36 COPE 11316
Affinity Capture-MS Homo sapiens
37 SCAP  
Affinity Capture-MS Homo sapiens
38 APOA5 116519
Two-hybrid Homo sapiens
39 CERS2 29956
Two-hybrid Homo sapiens
40 KDSR 2531
Affinity Capture-MS Homo sapiens
41 GS1-259H13.2  
Two-hybrid Homo sapiens
42 JOSD2  
Two-hybrid Homo sapiens
43 C12orf10 60314
Two-hybrid Homo sapiens
44 RPN1 6184
Proximity Label-MS Homo sapiens
45 VMA21  
Two-hybrid Homo sapiens
46 MIEF2  
Two-hybrid Homo sapiens
47 SCN3B  
Two-hybrid Homo sapiens
48 SEC61B 10952
Proximity Label-MS Homo sapiens
49 CACNG4  
Affinity Capture-MS Homo sapiens
50 CHRND  
Affinity Capture-MS Homo sapiens
51 CLRN2  
Affinity Capture-MS Homo sapiens
52 REEP5 7905
Proximity Label-MS Homo sapiens
53 CLEC5A  
Affinity Capture-MS Homo sapiens
54 GJA8  
Two-hybrid Homo sapiens
55 ZDHHC16  
Two-hybrid Homo sapiens
56 SLC22A6 9356
Affinity Capture-MS Homo sapiens
57 PLEKHF2 79666
Two-hybrid Homo sapiens
58 FFAR2  
Two-hybrid Homo sapiens
59 ERGIC3 51614
Two-hybrid Homo sapiens
60 HSD3B7 80270
Proximity Label-MS Homo sapiens
61 SYTL5 94122
Two-hybrid Homo sapiens
62 TMEM139  
Two-hybrid Homo sapiens
63 YIPF5 81555
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
64 PTGES 9536
Two-hybrid Homo sapiens
65 NDRG4 65009
Two-hybrid Homo sapiens
66 GPR42  
Two-hybrid Homo sapiens
67 Uso1 56041
Affinity Capture-MS Mus musculus
68 SDCBP 6386
Two-hybrid Homo sapiens
69 SYTL2 54843
Two-hybrid Homo sapiens
70 SLC10A1  
Two-hybrid Homo sapiens
71 YIPF4 84272
Two-hybrid Homo sapiens
72 HSPA4 3308
Affinity Capture-MS Homo sapiens
73 SNX2 6643
Two-hybrid Homo sapiens
74 GPR37  
Two-hybrid Homo sapiens
75 RIC3  
Two-hybrid Homo sapiens
76 TMX2 51075
Two-hybrid Homo sapiens
77 PPIF 10105
Two-hybrid Homo sapiens
78 YIF1B 90522
Negative Genetic Homo sapiens
79 TMED10 10972
Affinity Capture-MS Homo sapiens
80 RBFA  
Two-hybrid Homo sapiens
81 WDFY2  
Two-hybrid Homo sapiens
82 SEC23IP 11196
Two-hybrid Homo sapiens
83 SIDT2 51092
Affinity Capture-MS Homo sapiens
84 ZFYVE27 118813
Two-hybrid Homo sapiens
85 SCN4B  
Two-hybrid Homo sapiens
86 HSD17B11 51170
Proximity Label-MS Homo sapiens
Two-hybrid Homo sapiens
87 CDK2AP2  
Two-hybrid Homo sapiens
88 CNRIP1 25927
Two-hybrid Homo sapiens
89 EBP  
Two-hybrid Homo sapiens
90 REEP2  
Two-hybrid Homo sapiens
91 ERGIC1 57222
Proximity Label-MS Homo sapiens
92 MMGT1 93380
Two-hybrid Homo sapiens
93 AOC2  
Affinity Capture-MS Homo sapiens
94 Tipin  
Affinity Capture-MS Mus musculus
95 SEC62 7095
Proximity Label-MS Homo sapiens
96 ZNRF4  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
97 TMEM248 55069
Two-hybrid Homo sapiens
98 POMK  
Affinity Capture-MS Homo sapiens
99 BNIP2  
Two-hybrid Homo sapiens
100 KIR2DL4  
Affinity Capture-MS Homo sapiens
101 RAB5C 5878
Proximity Label-MS Homo sapiens
102 TMEM31  
Two-hybrid Homo sapiens
103 FARS2 10667
Two-hybrid Homo sapiens
104 ELOVL4  
Two-hybrid Homo sapiens
105 FCER1G 2207
Two-hybrid Homo sapiens
106 MGST3 4259
Two-hybrid Homo sapiens
107 FAM210B  
Two-hybrid Homo sapiens
108 ATP2A1 487
Proximity Label-MS Homo sapiens
View the network image/svg+xml



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