Gene description for STRBP
Gene name spermatid perinuclear RNA binding protein
Gene symbol STRBP
Other names/aliases HEL162
ILF3L
SPNR
p74
Species Homo sapiens
 Database cross references - STRBP
ExoCarta ExoCarta_55342
Vesiclepedia VP_55342
Entrez Gene 55342
HGNC 16462
MIM 611138
UniProt Q96SI9  
 STRBP identified in exosomes derived from the following tissue/cell type
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
Colorectal cancer cells 23161513    
 Gene ontology annotations for STRBP
Molecular Function
    DNA binding GO:0003677 IEA
    RNA binding GO:0003723 HDA
    double-stranded RNA binding GO:0003725 IBA
    single-stranded RNA binding GO:0003727 IBA
    protein binding GO:0005515 IPI
    microtubule binding GO:0008017 IEA
Biological Process
    spermatid development GO:0007286 IEA
    mechanosensory behavior GO:0007638 IEA
    cell motility GO:0048870 IEA
Subcellular Localization
    manchette GO:0002177 IEA
    nucleus GO:0005634 IDA
    cytoplasm GO:0005737 IEA
 Experiment description of studies that identified STRBP in exosomes
1
Experiment ID 207
MISEV standards
EM
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DKO-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
2
Experiment ID 208
MISEV standards
EM
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name Dks-8
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 209
MISEV standards
Biophysical techniques
TSG101|HSP70|FLOT1
Enriched markers
VDAC
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23161513    
Organism Homo sapiens
Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name Mol Cell Proteomics
Publication year 2012
Sample Colorectal cancer cells
Sample name DLD-1
Isolation/purification methods Differential centrifugation
Filtration
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for STRBP
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 GNL2 29889
Affinity Capture-MS Homo sapiens
2 HNRNPH1 3187
Affinity Capture-MS Homo sapiens
3 RALY 22913
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
4 CCL3  
Affinity Capture-MS Homo sapiens
5 FOXF1 2294
Affinity Capture-MS Homo sapiens
6 MRPS27 23107
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
7 UBE2H 7328
Affinity Capture-MS Homo sapiens
8 HNRNPC 3183
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
9 ARNT 405
Two-hybrid Homo sapiens
10 RBPMS 11030
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
11 ZNF346  
Two-hybrid Homo sapiens
12 KPNA1 3836
Affinity Capture-MS Homo sapiens
13 ELAVL2 1993
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
14 RPA2 6118
Affinity Capture-MS Homo sapiens
15 NGRN  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
16 MAP4 4134
Two-hybrid Homo sapiens
17 DAB1 1600
Two-hybrid Homo sapiens
18 IGF2BP1 10642
Affinity Capture-MS Homo sapiens
19 PUM2 23369
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
20 ROCK2 9475
Co-fractionation Homo sapiens
21 CAND1 55832
Affinity Capture-MS Homo sapiens
22 HNRNPR 10236
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
23 RPS6KB2  
Co-fractionation Homo sapiens
24 MSI1  
Affinity Capture-MS Homo sapiens
25 RPS3 6188
Affinity Capture-MS Homo sapiens
26 ILF2 3608
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
27 HNRNPUL2 221092
Affinity Capture-MS Homo sapiens
28 APEX1 328
Proximity Label-MS Homo sapiens
29 SNRNP70 6625
Affinity Capture-MS Homo sapiens
30 MEAF6  
Affinity Capture-MS Homo sapiens
31 UCP3  
Affinity Capture-MS Homo sapiens
32 LLPH  
Affinity Capture-MS Homo sapiens
33 KIF23 9493
Affinity Capture-MS Homo sapiens
34 Htatsf1  
Two-hybrid Mus musculus
35 COPS5 10987
Affinity Capture-MS Homo sapiens
36 PRC1 9055
Affinity Capture-MS Homo sapiens
37 MRPS23 51649
Affinity Capture-MS Homo sapiens
38 OBSL1 23363
Affinity Capture-MS Homo sapiens
39 RHOA 387
Affinity Capture-MS Homo sapiens
40 ADARB1 104
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
41 STAU2 27067
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
42 PRKRA 8575
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
43 EED  
Affinity Capture-MS Homo sapiens
44 KLHL20  
Affinity Capture-MS Homo sapiens
45 KLK6 5653
Affinity Capture-MS Homo sapiens
46 CUL1 8454
Affinity Capture-MS Homo sapiens
47 MYCN  
Affinity Capture-MS Homo sapiens
48 ASF1A 25842
Proximity Label-MS Homo sapiens
49 RPL19 6143
Affinity Capture-MS Homo sapiens
50 NEIL3  
Protein-RNA Homo sapiens
51 KIF14 9928
Affinity Capture-MS Homo sapiens
52 LARP4B 23185
Affinity Capture-MS Homo sapiens
53 LIN28A  
Affinity Capture-MS Homo sapiens
54 PSME3 10197
Affinity Capture-MS Homo sapiens
55 CPEB1  
Affinity Capture-MS Homo sapiens
56 CHMP4C 92421
Affinity Capture-MS Homo sapiens
57 MRPS25 64432
Affinity Capture-MS Homo sapiens
58 DDX21 9188
Affinity Capture-MS Homo sapiens
59 LIN28B  
Affinity Capture-MS Homo sapiens
60 MRPS34 65993
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
61 TARBP2  
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
62 YBX2 51087
Affinity Capture-MS Homo sapiens
63 MRPS11  
Affinity Capture-MS Homo sapiens
64 STAU1 6780
Two-hybrid Homo sapiens
65 APOBEC3C 27350
Affinity Capture-MS Homo sapiens
66 PURG  
Affinity Capture-MS Homo sapiens
67 AKR7L 246181
Affinity Capture-MS Homo sapiens
68 CHMP4B 128866
Affinity Capture-MS Homo sapiens
69 CRP  
Affinity Capture-MS Homo sapiens
70 AIM2  
Affinity Capture-MS Homo sapiens
71 RAD18  
Affinity Capture-MS Homo sapiens
72 CBX6  
Affinity Capture-MS Homo sapiens
73 DHX9 1660
Affinity Capture-MS Homo sapiens
74 HECTD1 25831
Affinity Capture-MS Homo sapiens
75 Ube2i  
Two-hybrid Mus musculus
76 MAGEB2 4113
Affinity Capture-MS Homo sapiens
77 UPF1 5976
Affinity Capture-MS Homo sapiens
78 CDX1  
Affinity Capture-MS Homo sapiens
79 CD3EAP  
Proximity Label-MS Homo sapiens
80 LARP1 23367
Affinity Capture-MS Homo sapiens
81 SCARNA22  
Affinity Capture-RNA Homo sapiens
82 ANLN 54443
Affinity Capture-MS Homo sapiens
83 FGFBP1 9982
Affinity Capture-MS Homo sapiens
84 HNRNPD 3184
Affinity Capture-MS Homo sapiens
85 FGF8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
86 ABT1 29777
Affinity Capture-MS Homo sapiens
87 AURKAIP1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
88 SIRT7  
Affinity Capture-MS Homo sapiens
89 RBPMS2  
Two-hybrid Homo sapiens
90 CUL3 8452
Affinity Capture-MS Homo sapiens
91 NR3C1 2908
Proximity Label-MS Homo sapiens
92 HNRNPA1 3178
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
93 FOXL1  
Affinity Capture-MS Homo sapiens
94 HNRNPCL2 440563
Affinity Capture-MS Homo sapiens
95 THAP1  
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
96 PRR3  
Affinity Capture-MS Homo sapiens
97 DICER1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
98 CTCFL  
Affinity Capture-MS Homo sapiens
99 DCUN1D1 54165
Affinity Capture-MS Homo sapiens
100 MYC  
Affinity Capture-MS Homo sapiens
101 RPA3 6119
Affinity Capture-MS Homo sapiens
Proximity Label-MS Homo sapiens
102 PABPC5 140886
Affinity Capture-MS Homo sapiens
103 HSPA1A 3303
Cross-Linking-MS (XL-MS) Homo sapiens
104 CXCL9  
Affinity Capture-MS Homo sapiens
105 DDRGK1 65992
Affinity Capture-MS Homo sapiens
106 RNF2  
Affinity Capture-MS Homo sapiens
107 BMI1  
Affinity Capture-MS Homo sapiens
108 MRPS17 51373
Affinity Capture-MS Homo sapiens
109 CAMK2G 818
Two-hybrid Homo sapiens
110 RBMS2 5939
Affinity Capture-MS Homo sapiens
111 RPS16 6217
Affinity Capture-MS Homo sapiens
112 FAM120A 23196
Affinity Capture-MS Homo sapiens
113 FBXL6  
Affinity Capture-MS Homo sapiens
114 PARP1 142
Proximity Label-MS Homo sapiens
115 ILF3 3609
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
Cross-Linking-MS (XL-MS) Homo sapiens
116 Osgep  
Affinity Capture-MS Mus musculus
117 APOBEC3D  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
118 RPA1 6117
Affinity Capture-MS Homo sapiens
119 UTP23  
Affinity Capture-MS Homo sapiens
120 MRPS15  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
121 MNDA 4332
Affinity Capture-MS Homo sapiens
122 MRPS18B 28973
Affinity Capture-MS Homo sapiens
123 RPS24 6229
Proximity Label-MS Homo sapiens
124 HNRNPL 3191
Affinity Capture-MS Homo sapiens
125 LRRK2 120892
Two-hybrid Homo sapiens
126 TRIM31  
Affinity Capture-MS Homo sapiens
127 RPL31 6160
Proximity Label-MS Homo sapiens
128 RPS6 6194
Proximity Label-MS Homo sapiens
Affinity Capture-MS Homo sapiens
129 RNASE1  
Affinity Capture-MS Homo sapiens
130 PPAN 56342
Affinity Capture-MS Homo sapiens
131 HNRNPU 3192
Affinity Capture-MS Homo sapiens
132 ZNF169 169841
Affinity Capture-MS Homo sapiens
133 RAC1 5879
Affinity Capture-MS Homo sapiens
134 ZNF467  
Affinity Capture-MS Homo sapiens
135 MRPS9 64965
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
136 NEDD8 4738
Affinity Capture-MS Homo sapiens
137 EP300 2033
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which STRBP is involved
No pathways found





Perform bioinformatics analysis of your extracellular vesicle data set using FunRich, a open access standalone tool. NEW UPDATED VERSION OF FunRich available for download (12/09/2016) from here