Gene description for ZC3H13
Gene name zinc finger CCCH-type containing 13
Gene symbol ZC3H13
Other names/aliases KIAA0853
Species Homo sapiens
 Database cross references - ZC3H13
ExoCarta ExoCarta_23091
Vesiclepedia VP_23091
Entrez Gene 23091
HGNC 20368
UniProt Q5T200  
 ZC3H13 identified in sEVs derived from the following tissue/cell type
Hepatocellular carcinoma cells 26054723    
 Gene ontology annotations for ZC3H13
Molecular Function
    RNA binding GO:0003723 HDA
    protein binding GO:0005515 IPI
    metal ion binding GO:0046872 IEA
Biological Process
    mRNA processing GO:0006397 IMP
    RNA splicing GO:0008380 IEA
    regulation of stem cell population maintenance GO:2000036 ISS
Subcellular Localization
    nucleus GO:0005634 NAS
    nucleoplasm GO:0005654 IDA
    nuclear speck GO:0016607 IBA
    nuclear speck GO:0016607 IDA
    RNA N6-methyladenosine methyltransferase complex GO:0036396 IDA
    RNA N6-methyladenosine methyltransferase complex GO:0036396 IPI
 Experiment description of studies that identified ZC3H13 in sEVs
1
Experiment ID 235
MISEV standards
Biophysical techniques
Enriched markers
Negative markers
Particle analysis
Identified molecule mRNA
Identification method RNA Sequencing
PubMed ID 26054723    
Organism Homo sapiens
Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs
Authors "He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N"
Journal name Carcinogenesis
Publication year 2015
Sample Hepatocellular carcinoma cells
Sample name HKCI-8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.13-1.19 g/mL
Molecules identified in the study Protein
RNA
Methods used in the study Western blotting
Mass spectrometry
RT-PCR
RNA Sequencing
 Protein-protein interactions for ZC3H13
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 GNL2 29889
Affinity Capture-MS Homo sapiens
2 EIF3A 8661
Cross-Linking-MS (XL-MS) Homo sapiens
3 MED17  
Affinity Capture-MS Homo sapiens
4 ZNF645  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
5 MED29  
Affinity Capture-MS Homo sapiens
6 ANAPC15  
Affinity Capture-MS Homo sapiens
7 ID1  
Affinity Capture-MS Homo sapiens
8 MED9  
Affinity Capture-MS Homo sapiens
9 DHX8 1659
Proximity Label-MS Homo sapiens
10 CSNK2A1 1457
Biochemical Activity Homo sapiens
11 MED24 9862
Affinity Capture-MS Homo sapiens
12 RNF40 9810
Affinity Capture-MS Homo sapiens
13 ANKRD50 57182
Affinity Capture-MS Homo sapiens
14 KIAA1429 25962
Co-fractionation Homo sapiens
Affinity Capture-Western Homo sapiens
15 WTAP 9589
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
16 DDX23 9416
Proximity Label-MS Homo sapiens
17 MED13 9969
Affinity Capture-MS Homo sapiens
18 UBE2O 63893
Affinity Capture-MS Homo sapiens
19 COL8A1 1295
Affinity Capture-MS Homo sapiens
20 YWHAG 7532
Affinity Capture-MS Homo sapiens
21 DDOST 1650
Affinity Capture-MS Homo sapiens
22 PEA15 8682
Affinity Capture-MS Homo sapiens
23 GAGE2E 26749
Affinity Capture-MS Homo sapiens
24 YWHAH 7533
Affinity Capture-MS Homo sapiens
25 ATG16L1 55054
Affinity Capture-MS Homo sapiens
26 MECP2 4204
Affinity Capture-MS Homo sapiens
27 SCHIP1  
Reconstituted Complex Homo sapiens
28 SNX27 81609
Affinity Capture-MS Homo sapiens
29 SH3BGRL 6451
Affinity Capture-MS Homo sapiens
30 ASF1A 25842
Proximity Label-MS Homo sapiens
31 THOC1 9984
Affinity Capture-MS Homo sapiens
32 MZT1  
Affinity Capture-MS Homo sapiens
33 HSPA8 3312
Co-fractionation Homo sapiens
34 CBR1 873
Affinity Capture-MS Homo sapiens
35 MED1 5469
Affinity Capture-MS Homo sapiens
36 MED16 10025
Affinity Capture-MS Homo sapiens
37 TMEM14B  
Affinity Capture-MS Homo sapiens
38 MED20 9477
Affinity Capture-MS Homo sapiens
39 HIST1H4A 8359
Affinity Capture-MS Homo sapiens
40 C17orf85  
Proximity Label-MS Homo sapiens
41 SRSF6 6431
Affinity Capture-MS Homo sapiens
42 IFI27L1  
Affinity Capture-MS Homo sapiens
43 C16orf58 64755
Affinity Capture-MS Homo sapiens
44 RPL31 6160
Proximity Label-MS Homo sapiens
45 U2AF2 11338
Affinity Capture-MS Homo sapiens
46 RAD18  
Affinity Capture-MS Homo sapiens
47 YWHAQ 10971
Reconstituted Complex Homo sapiens
48 TMEM257  
Affinity Capture-MS Homo sapiens
49 MED25  
Affinity Capture-MS Homo sapiens
50 MAGOH 4116
Affinity Capture-MS Homo sapiens
51 MED15  
Affinity Capture-MS Homo sapiens
52 POLR2B 5431
Affinity Capture-MS Homo sapiens
53 GAN 8139
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
54 HSPA5 3309
Co-fractionation Homo sapiens
55 METTL14  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
56 CCNC  
Affinity Capture-MS Homo sapiens
57 CLK3  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
58 TCEAL7  
Affinity Capture-MS Homo sapiens
59 USP15 9958
Co-fractionation Homo sapiens
60 PSENEN  
Affinity Capture-MS Homo sapiens
61 SMARCA5 8467
Co-fractionation Homo sapiens
62 SIRT7  
Affinity Capture-MS Homo sapiens
63 MED26  
Affinity Capture-MS Homo sapiens
64 CDK19 23097
Affinity Capture-MS Homo sapiens
65 HNRNPA1 3178
Proximity Label-MS Homo sapiens
66 BAP1 8314
Co-purification Homo sapiens
67 POLR2A 5430
Affinity Capture-MS Homo sapiens
68 SUZ12  
Affinity Capture-MS Homo sapiens
69 KIF26B  
Affinity Capture-MS Homo sapiens
70 MYCN  
Affinity Capture-MS Homo sapiens
71 ZC3H18  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
72 DNAJC9 23234
Proximity Label-MS Homo sapiens
73 PABPC5 140886
Affinity Capture-MS Homo sapiens
74 MED23 9439
Affinity Capture-MS Homo sapiens
75 CHD8 57680
Affinity Capture-MS Homo sapiens
76 BMI1  
Affinity Capture-MS Homo sapiens
77 Nedd1  
Affinity Capture-MS Mus musculus
78 TMSB4Y  
Affinity Capture-MS Homo sapiens
79 MED14  
Affinity Capture-MS Homo sapiens
80 MALL  
Affinity Capture-MS Homo sapiens
81 OST4  
Affinity Capture-MS Homo sapiens
82 MED27  
Affinity Capture-MS Homo sapiens
83 MED19  
Affinity Capture-MS Homo sapiens
84 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
85 TERF2  
Affinity Capture-MS Homo sapiens
86 CENPA  
Co-purification Homo sapiens
87 MED4 29079
Affinity Capture-MS Homo sapiens
88 WBP11  
Co-fractionation Homo sapiens
89 SAA1 6288
Affinity Capture-MS Homo sapiens
90 SAP18 10284
Affinity Capture-MS Homo sapiens
91 MED8  
Affinity Capture-MS Homo sapiens
92 MED6  
Affinity Capture-MS Homo sapiens
93 IFI6  
Affinity Capture-MS Homo sapiens
94 EIF4A3 9775
Affinity Capture-MS Homo sapiens
95 EZH1  
Affinity Capture-MS Homo sapiens
96 MED30  
Affinity Capture-MS Homo sapiens
97 DHX40  
Proximity Label-MS Homo sapiens
98 C20orf197  
Affinity Capture-MS Homo sapiens
99 MED21  
Affinity Capture-MS Homo sapiens
100 MED12  
Affinity Capture-MS Homo sapiens
101 ALYREF 10189
Affinity Capture-MS Homo sapiens
102 CDK9 1025
Affinity Capture-MS Homo sapiens
103 PINK1  
Affinity Capture-MS Homo sapiens
104 CIT 11113
Affinity Capture-MS Homo sapiens
105 GAGE5  
Affinity Capture-MS Homo sapiens
106 METTL3  
Affinity Capture-MS Homo sapiens
Affinity Capture-Western Homo sapiens
107 EHHADH 1962
Affinity Capture-MS Homo sapiens
108 PRMT1 3276
Affinity Capture-MS Homo sapiens
109 UQCR11  
Affinity Capture-MS Homo sapiens
110 MED28  
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which ZC3H13 is involved
No pathways found





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