Gene ontology annotations for PPP1R18
Experiment description of studies that identified PPP1R18 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
Protein-protein interactions for PPP1R18
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
LIG4
3981
Affinity Capture-MS
Homo sapiens
2
HOMER3
9454
Two-hybrid
Homo sapiens
3
LUZP4
Affinity Capture-MS
Homo sapiens
4
CCDC88B
283234
Two-hybrid
Homo sapiens
5
PPP1CB
5500
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
6
PPP1R3A
Affinity Capture-MS
Homo sapiens
7
Tpm1
22003
Affinity Capture-MS
Mus musculus
8
ABRA
Two-hybrid
Homo sapiens
9
CARD9
64170
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
10
SPERT
Two-hybrid
Homo sapiens
11
Calml3
Affinity Capture-MS
Mus musculus
12
FAM9B
Two-hybrid
Homo sapiens
13
TEX11
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
14
GFAP
2670
Two-hybrid
Homo sapiens
15
BRCA1
672
Affinity Capture-MS
Homo sapiens
16
PLEKHF2
79666
Two-hybrid
Homo sapiens
17
KIF20A
10112
Affinity Capture-MS
Homo sapiens
18
TRIM62
Two-hybrid
Homo sapiens
19
Actb
11461
Affinity Capture-MS
Mus musculus
20
CCDC102B
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
21
STX11
8676
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
22
PCBP3
54039
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
23
TRIM54
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
24
PPP1CC
5501
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
25
SEPT9
10801
Affinity Capture-MS
Homo sapiens
26
CEP70
Two-hybrid
Homo sapiens
27
DYRK1A
1859
Affinity Capture-MS
Homo sapiens
28
KRT40
Two-hybrid
Homo sapiens
29
IQGAP1
8826
Affinity Capture-MS
Homo sapiens
30
CALCOCO2
Two-hybrid
Homo sapiens
31
TFIP11
Two-hybrid
Homo sapiens
32
Taok2
Affinity Capture-MS
Mus musculus
33
KRT31
3881
Two-hybrid
Homo sapiens
34
MID2
11043
Two-hybrid
Homo sapiens
35
ATG16L1
55054
Affinity Capture-MS
Homo sapiens
36
FSD2
123722
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
37
Lima1
Affinity Capture-MS
Mus musculus
38
KIF14
9928
Affinity Capture-MS
Homo sapiens
39
GOLGA6L9
Two-hybrid
Homo sapiens
40
PPP1CA
5499
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Proximity Label-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
41
MTUS2
23281
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
42
KRT34
Two-hybrid
Homo sapiens
43
MYO18A
399687
Affinity Capture-MS
Homo sapiens
44
FHL5
9457
Two-hybrid
Homo sapiens
45
PRPH
5630
Two-hybrid
Homo sapiens
46
CTDP1
9150
Affinity Capture-MS
Homo sapiens
47
SPDL1
Two-hybrid
Homo sapiens
48
CDR2L
Two-hybrid
Homo sapiens
49
GOLGA2
2801
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
50
CPVL
54504
Affinity Capture-MS
Homo sapiens
51
CDH1
999
Proximity Label-MS
Homo sapiens
52
CHMP4B
128866
Affinity Capture-MS
Homo sapiens
53
GCC1
79571
Two-hybrid
Homo sapiens
54
VCP
7415
Affinity Capture-MS
Homo sapiens
55
Pafah1b1
18472
Affinity Capture-MS
Mus musculus
56
MEOX2
Two-hybrid
Homo sapiens
57
BICD2
23299
Two-hybrid
Homo sapiens
58
ACTB
60
Proximity Label-MS
Homo sapiens
59
DBN1
1627
Affinity Capture-MS
Homo sapiens
60
HAP1
Two-hybrid
Homo sapiens
61
GTPBP3
Two-hybrid
Homo sapiens
62
ANLN
54443
Affinity Capture-MS
Homo sapiens
63
LIMA1
51474
Affinity Capture-MS
Homo sapiens
64
HNRNPD
3184
Affinity Capture-MS
Homo sapiens
65
Myh9
17886
Affinity Capture-MS
Mus musculus
66
KRT33B
3884
Two-hybrid
Homo sapiens
67
KCTD9
Two-hybrid
Homo sapiens
68
ECT2
1894
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
69
DOCK7
85440
Affinity Capture-MS
Homo sapiens
70
IKZF3
Two-hybrid
Homo sapiens
71
CCDC57
284001
Two-hybrid
Homo sapiens
72
DES
1674
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
73
RASIP1
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
74
MYO19
Affinity Capture-MS
Homo sapiens
75
CCDC155
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
76
ACTN3
89
Two-hybrid
Homo sapiens
77
KRT27
342574
Two-hybrid
Homo sapiens
78
LZTS2
84445
Two-hybrid
Homo sapiens
79
KRT15
3866
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
80
COG6
57511
Two-hybrid
Homo sapiens
81
SYNPO
11346
Affinity Capture-MS
Homo sapiens
82
NEFL
4747
Two-hybrid
Homo sapiens
83
MYC
Affinity Capture-MS
Homo sapiens
84
TRIM27
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
85
SORBS3
10174
Two-hybrid
Homo sapiens
86
DZIP1
Two-hybrid
Homo sapiens
87
MRPL38
Two-hybrid
Homo sapiens
88
KRT19
3880
Two-hybrid
Homo sapiens
89
TSGA10
Two-hybrid
Homo sapiens
90
MGEA5
10724
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
91
GSN
2934
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
92
TRAF2
7186
Two-hybrid
Homo sapiens
93
KRT16
3868
Two-hybrid
Homo sapiens
94
KRT36
8689
Two-hybrid
Homo sapiens
95
VPS52
6293
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
96
EZR
7430
Proximity Label-MS
Homo sapiens
97
CAPZA2
830
Affinity Capture-MS
Homo sapiens
98
TSC1
7248
Two-hybrid
Homo sapiens
99
DDX58
23586
Affinity Capture-RNA
Homo sapiens
100
TCF4
Two-hybrid
Homo sapiens
101
TRIM23
373
Two-hybrid
Homo sapiens
102
FLNA
2316
Affinity Capture-MS
Homo sapiens
103
CIT
11113
Affinity Capture-MS
Homo sapiens
104
TRIM69
140691
Two-hybrid
Homo sapiens
105
LDOC1
Two-hybrid
Homo sapiens
106
PDE4DIP
9659
Two-hybrid
Homo sapiens
107
KRT13
3860
Two-hybrid
Homo sapiens
108
Flnb
286940
Affinity Capture-MS
Mus musculus
109
CCDC136
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
110
HSF2BP
Two-hybrid
Homo sapiens
View the network
image/svg+xml
Pathways in which PPP1R18 is involved
No pathways found