Gene description for EXOSC7
Gene name exosome component 7
Gene symbol EXOSC7
Other names/aliases EAP1
RRP42
Rrp42p
hRrp42p
p8
Species Homo sapiens
 Database cross references - EXOSC7
ExoCarta ExoCarta_23016
Vesiclepedia VP_23016
Entrez Gene 23016
HGNC 28112
MIM 606488
UniProt Q15024  
 EXOSC7 identified in exosomes derived from the following tissue/cell type
Thymus 23844026    
 Gene ontology annotations for EXOSC7
Molecular Function
    3'-5'-RNA exonuclease activity GO:0000175 TAS
    RNA binding GO:0003723 TAS
    RNA exonuclease activity GO:0004532 IDA
    protein binding GO:0005515 IPI
    mRNA 3'-UTR AU-rich region binding GO:0035925 IBA
Biological Process
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000467 IBA
    rRNA processing GO:0006364 TAS
    RNA processing GO:0006396 IDA
    RNA catabolic process GO:0006401 IDA
    RNA catabolic process GO:0006401 NAS
    rRNA catabolic process GO:0016075 IBA
    U1 snRNA 3'-end processing GO:0034473 IBA
    U4 snRNA 3'-end processing GO:0034475 IBA
    U5 snRNA 3'-end processing GO:0034476 IBA
    nuclear mRNA surveillance GO:0071028 IBA
    nuclear polyadenylation-dependent rRNA catabolic process GO:0071035 IBA
    TRAMP-dependent tRNA surveillance pathway GO:0071038 IBA
Subcellular Localization
    nuclear exosome (RNase complex) GO:0000176 IBA
    nuclear exosome (RNase complex) GO:0000176 NAS
    cytoplasmic exosome (RNase complex) GO:0000177 IBA
    cytoplasmic exosome (RNase complex) GO:0000177 NAS
    exosome (RNase complex) GO:0000178 IDA
    exosome (RNase complex) GO:0000178 NAS
    exosome (RNase complex) GO:0000178 TAS
    nucleus GO:0005634 IDA
    nucleoplasm GO:0005654 TAS
    nucleolus GO:0005730 IDA
    cytosol GO:0005829 IDA
    cytosol GO:0005829 TAS
    nucleolar exosome (RNase complex) GO:0101019 NAS
 Experiment description of studies that identified EXOSC7 in exosomes
1
Experiment ID 217
MISEV standards
EM
Biophysical techniques
TSG101|CD81|CD9|CD63
Enriched markers
Negative markers
NTA
Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors "Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O."
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for EXOSC7
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 UBE2H 7328
Affinity Capture-MS Homo sapiens
2 RIT1 6016
Negative Genetic Homo sapiens
3 EIF4G3 8672
Co-fractionation Homo sapiens
4 SLIT2 9353
Affinity Capture-MS Homo sapiens
5 HOOK1  
Two-hybrid Homo sapiens
6 DGCR14  
Two-hybrid Homo sapiens
7 RBPMS 11030
Two-hybrid Homo sapiens
8 EXOSC3 51010
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
9 RBM22 55696
Two-hybrid Homo sapiens
10 CCDC59  
Two-hybrid Homo sapiens
11 RPA2 6118
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
12 Bbs5  
Two-hybrid Mus musculus
13 RALYL 138046
Two-hybrid Homo sapiens
14 MRPL50 54534
Affinity Capture-MS Homo sapiens
15 UNKL  
Two-hybrid Homo sapiens
16 EIF4E2  
Affinity Capture-MS Homo sapiens
17 SOX2  
Affinity Capture-MS Homo sapiens
18 PARP8  
Affinity Capture-MS Homo sapiens
19 USP36  
Affinity Capture-MS Homo sapiens
20 EIF4ENIF1 56478
Two-hybrid Homo sapiens
21 EXOSC2 23404
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
22 C1D  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
23 DPYSL2 1808
Two-hybrid Homo sapiens
24 TSNAX 7257
Affinity Capture-MS Homo sapiens
25 Htatsf1  
Two-hybrid Mus musculus
26 PRC1 9055
Two-hybrid Homo sapiens
27 GDI1 2664
Affinity Capture-MS Homo sapiens
28 Mrps31  
Two-hybrid Mus musculus
29 TFIP11  
Two-hybrid Homo sapiens
30 KRT31 3881
Two-hybrid Homo sapiens
31 RSRC1  
Affinity Capture-MS Homo sapiens
32 SNRNP48  
Two-hybrid Homo sapiens
33 Tsnax  
Two-hybrid Mus musculus
34 EXOSC4 54512
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
35 Nhp2l1 20826
Two-hybrid Mus musculus
36 ATG16L1 55054
Affinity Capture-MS Homo sapiens
37 EXOSC6 118460
Two-hybrid Homo sapiens
Co-fractionation Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
38 ARIH2 10425
Affinity Capture-MS Homo sapiens
39 MPHOSPH6 10200
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
40 THOC1 9984
Two-hybrid Homo sapiens
41 OBSL1 23363
Affinity Capture-MS Homo sapiens
42 MZT1  
Affinity Capture-MS Homo sapiens
43 EXOSC9 5393
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
44 DMRTB1  
Two-hybrid Homo sapiens
45 PRPF6 24148
Two-hybrid Homo sapiens
46 DIS3L  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
47 DRG1 4733
Affinity Capture-MS Homo sapiens
48 SUPT5H 6829
Two-hybrid Homo sapiens
49 Nudt21 68219
Two-hybrid Mus musculus
50 RBM7  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
51 Ssbp1  
Two-hybrid Mus musculus
52 Mapre3  
Two-hybrid Mus musculus
53 DXO  
Two-hybrid Homo sapiens
54 EXOSC5 56915
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
55 BICD2 23299
Proximity Label-MS Homo sapiens
56 IP6K1 9807
Two-hybrid Homo sapiens
57 HECTD1 25831
Affinity Capture-MS Homo sapiens
58 ZFC3H1 196441
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
59 Ube2i  
Two-hybrid Mus musculus
60 Exosc1  
Affinity Capture-MS Mus musculus
61 Nufip2  
Two-hybrid Mus musculus
62 ZCCHC8 55596
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
63 Zc3h11a 70579
Two-hybrid Mus musculus
64 Grb2 14784
Two-hybrid Mus musculus
65 HBS1L 10767
Reconstituted Complex Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
66 Rbm14  
Two-hybrid Mus musculus
67 Cnn3 71994
Two-hybrid Mus musculus
68 RPL21 6144
Two-hybrid Homo sapiens
69 LRRC47 57470
Affinity Capture-MS Homo sapiens
70 MYCN  
Affinity Capture-MS Homo sapiens
71 PSPC1 55269
Affinity Capture-MS Homo sapiens
72 RPA3 6119
Affinity Capture-MS Homo sapiens
73 DIS3 22894
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
74 DHPS 1725
Affinity Capture-MS Homo sapiens
75 EHMT2 10919
Two-hybrid Homo sapiens
76 SKIV2L2 23517
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
77 DDRGK1 65992
Affinity Capture-MS Homo sapiens
78 Dynlt1b  
Two-hybrid Mus musculus
79 Sf3b2  
Two-hybrid Mus musculus
80 LARP4 113251
Two-hybrid Homo sapiens
81 RPS16 6217
Affinity Capture-MS Homo sapiens
82 Sf3a3 75062
Two-hybrid Mus musculus
83 APP 351
Reconstituted Complex Homo sapiens
84 EXOSC10 5394
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
85 ALG13 79868
Two-hybrid Homo sapiens
86 KIF24  
Two-hybrid Homo sapiens
87 PLEKHA4 57664
Affinity Capture-MS Homo sapiens
88 GIGYF2 26058
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
89 SIRT6  
Affinity Capture-MS Homo sapiens
90 FBXL6  
Affinity Capture-MS Homo sapiens
91 TP53 7157
Affinity Capture-MS Homo sapiens
92 MNDA 4332
Affinity Capture-MS Homo sapiens
93 Eif3g 53356
Two-hybrid Mus musculus
94 LUM 4060
Affinity Capture-MS Homo sapiens
95 RPA1 6117
Affinity Capture-MS Homo sapiens
96 THOP1 7064
Affinity Capture-MS Homo sapiens
97 C1orf35  
Two-hybrid Homo sapiens
98 HDAC1 3065
Affinity Capture-MS Homo sapiens
99 PRRC2B  
Two-hybrid Homo sapiens
100 MKI67  
Affinity Capture-MS Homo sapiens
101 MIF 4282
Two-hybrid Homo sapiens
102 USP30  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
103 Fez2  
Two-hybrid Mus musculus
104 Rrbp1  
Affinity Capture-MS Mus musculus
105 SNW1 22938
Two-hybrid Homo sapiens
106 GNB2L1 10399
Affinity Capture-MS Homo sapiens
107 VIM 7431
Two-hybrid Homo sapiens
108 Pspc1  
Two-hybrid Mus musculus
109 Zcchc17  
Two-hybrid Mus musculus
110 HECW2  
Affinity Capture-MS Homo sapiens
111 EXOSC1 51013
Reconstituted Complex Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Co-fractionation Homo sapiens
112 EXOSC8  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Two-hybrid Homo sapiens
View the network image/svg+xml



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