Experiment description of studies that identified ZFC3H1 in exosomes

1 Experiment ID 207 MISEV standards ✔ EM Biophysical techniques ✔ TSG101|HSP70|FLOT1 Enriched markers ✔ VDAC Negative markers ✔ NTA Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 23161513     Organism Homo sapiens Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." Journal name Mol Cell Proteomics Publication year 2012 Sample Colorectal cancer cells Sample name DKO-1 Isolation/purification methods Differential centrifugation Filtration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

2 Experiment ID 208 MISEV standards ✔ EM Biophysical techniques ✔ TSG101|HSP70|FLOT1 Enriched markers ✔ VDAC Negative markers ✔ NTA Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 23161513     Organism Homo sapiens Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." Journal name Mol Cell Proteomics Publication year 2012 Sample Colorectal cancer cells Sample name Dks-8 Isolation/purification methods Differential centrifugation Filtration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

3 Experiment ID 209 MISEV standards ✘ Biophysical techniques ✔ TSG101|HSP70|FLOT1 Enriched markers ✔ VDAC Negative markers ✔ NTA Particle analysis Identified molecule protein Identification method Mass spectrometry PubMed ID 23161513     Organism Homo sapiens Experiment description Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. Authors "Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." Journal name Mol Cell Proteomics Publication year 2012 Sample Colorectal cancer cells Sample name DLD-1 Isolation/purification methods Differential centrifugation Filtration Flotation density - Molecules identified in the study Protein Methods used in the study Mass spectrometry

Protein-protein interactions for ZFC3H1

Protein Interactor ExoCarta ID Identification method PubMed Species 1 GNL2 29889 Affinity Capture-MS Homo sapiens 2 RALY 22913 Affinity Capture-MS Homo sapiens 3 SUFU 51684 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 4 MIB1 57534 Affinity Capture-MS Homo sapiens 5 EXOSC7 23016 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 6 LGR4 55366 Affinity Capture-MS Homo sapiens 7 ANGEL2 90806 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 8 RPA2 6118 Proximity Label-MS Homo sapiens 9 VPRBP 9730 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 10 RPL13A 23521 Affinity Capture-MS Homo sapiens 11 ANAPC15   Affinity Capture-MS Homo sapiens 12 LARP1B 55132 Affinity Capture-MS Homo sapiens 13 NOP56 10528 Proximity Label-MS Homo sapiens 14 DHX8 1659 Proximity Label-MS Homo sapiens 15 PRMT6   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 16 BUB1B   Affinity Capture-MS Homo sapiens 17 CSNK2A1 1457 Biochemical Activity Homo sapiens 18 HNRNPCL1 343069 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 19 APP 351 Reconstituted Complex Homo sapiens Affinity Capture-MS Homo sapiens 20 ANKRD50 57182 Affinity Capture-MS Homo sapiens 21 EXOSC2 23404 Affinity Capture-MS Homo sapiens 22 VPS72   Co-fractionation Homo sapiens 23 CEP70   Two-hybrid Homo sapiens 24 KIF23 9493 Affinity Capture-MS Homo sapiens 25 PCID2 55795 Affinity Capture-MS Homo sapiens 26 CADPS   Two-hybrid Homo sapiens 27 MRPS5 64969 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 28 MRPS23 51649 Affinity Capture-MS Homo sapiens 29 MRPS24 64951 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 30 ACTR1A 10121 Affinity Capture-MS Homo sapiens 31 MAGEA9   Affinity Capture-MS Homo sapiens 32 FBXW8 26259 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 33 POLR1E   Proximity Label-MS Homo sapiens 34 MTUS2 23281 Two-hybrid Homo sapiens 35 PSENEN   Affinity Capture-MS Homo sapiens 36 EXOSC4 54512 Affinity Capture-MS Homo sapiens 37 CENPQ   Affinity Capture-MS Homo sapiens 38 SRSF6 6431 Affinity Capture-MS Homo sapiens 39 SDHAP2   Affinity Capture-MS Homo sapiens 40 MRPS7 51081 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 41 MYCN   Affinity Capture-MS Homo sapiens 42 MPHOSPH6 10200 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 43 THOC1 9984 Affinity Capture-MS Homo sapiens 44 MYH13 8735 Affinity Capture-MS Homo sapiens 45 PABPC4 8761 Affinity Capture-MS Homo sapiens 46 MTERF3   Affinity Capture-MS Homo sapiens 47 DYNC1H1 1778 Cross-Linking-MS (XL-MS) Homo sapiens 48 GPN3   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 49 TBC1D1 23216 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 50 NINL   Two-hybrid Homo sapiens 51 C15orf59   Affinity Capture-MS Homo sapiens 52 SPAG5 10615 Two-hybrid Homo sapiens 53 ZDHHC17 23390 Two-hybrid Homo sapiens 54 PURG   Affinity Capture-MS Homo sapiens 55 MRPS25 64432 Affinity Capture-MS Homo sapiens 56 TMEM14B   Affinity Capture-MS Homo sapiens 57 HIST1H4A 8359 Affinity Capture-MS Homo sapiens 58 MCAT 27349 Affinity Capture-MS Homo sapiens 59 RPL4 6124 Affinity Capture-MS Homo sapiens 60 Ddb1 13194 Affinity Capture-MS Mus musculus 61 NOL6 65083 Affinity Capture-MS Homo sapiens 62 MRPS11   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 63 GOLGA2 2801 Two-hybrid Homo sapiens 64 HTT 3064 Affinity Capture-Luminescence Homo sapiens Affinity Capture-Luminescence Homo sapiens 65 SRRT 51593 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 66 PTCD3 55037 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 67 MKRN2 23609 Affinity Capture-MS Homo sapiens 68 C9orf41   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 69 EXOSC5 56915 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 70 PPP2CA 5515 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 71 HECTD1 25831 Affinity Capture-MS Homo sapiens 72 MAGEB2 4113 Affinity Capture-MS Homo sapiens 73 DDX39B 7919 Affinity Capture-MS Homo sapiens 74 Exosc1   Affinity Capture-MS Mus musculus 75 CD3EAP   Proximity Label-MS Homo sapiens 76 LARP1 23367 Affinity Capture-MS Homo sapiens 77 OR10G9   Cross-Linking-MS (XL-MS) Homo sapiens 78 ZNF326 284695 Affinity Capture-MS Homo sapiens 79 FGFBP1 9982 Affinity Capture-MS Homo sapiens 80 PPP2R3A   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 81 CEP128   Cross-Linking-MS (XL-MS) Homo sapiens 82 GAN 8139 Affinity Capture-MS Homo sapiens 83 DOCK8 81704 Two-hybrid Homo sapiens 84 MRPS35 60488 Affinity Capture-MS Homo sapiens 85 BAG2 9532 Cross-Linking-MS (XL-MS) Homo sapiens 86 TBCE 6905 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 87 CCDC57 284001 Two-hybrid Homo sapiens 88 MRPS14   Affinity Capture-MS Homo sapiens 89 YLPM1 56252 Affinity Capture-MS Homo sapiens 90 ERCC4   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 91 EGFR 1956 Negative Genetic Homo sapiens 92 ERCC1   Affinity Capture-MS Homo sapiens 93 RBM27   Affinity Capture-MS Homo sapiens 94 PLXNB2 23654 Cross-Linking-MS (XL-MS) Homo sapiens 95 PPHLN1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 96 COG6 57511 Two-hybrid Homo sapiens 97 DGKZ   Affinity Capture-MS Homo sapiens 98 RPA3 6119 Proximity Label-MS Homo sapiens 99 ZC3H18   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 100 DHX30 22907 Affinity Capture-MS Homo sapiens 101 CCDC85B   Two-hybrid Homo sapiens 102 TRIM27   Two-hybrid Homo sapiens 103 HSPA1A 3303 Cross-Linking-MS (XL-MS) Homo sapiens 104 RBM45   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 105 SKIV2L2 23517 Affinity Capture-MS Homo sapiens 106 CUL7 9820 Affinity Capture-MS Homo sapiens 107 DDRGK1 65992 Affinity Capture-MS Homo sapiens 108 SLC12A6 9990 Affinity Capture-MS Homo sapiens 109 EIF2B1 1967 Affinity Capture-MS Homo sapiens 110 ADAR 103 Affinity Capture-MS Homo sapiens 111 ZC3H3   Affinity Capture-MS Homo sapiens 112 SLBP   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 113 TPM3 7170 Affinity Capture-MS Homo sapiens 114 TACC3   Affinity Capture-MS Homo sapiens 115 ZRANB1 54764 Affinity Capture-MS Homo sapiens 116 MAPKAPK2 9261 Affinity Capture-MS Homo sapiens 117 OR10G4   Cross-Linking-MS (XL-MS) Homo sapiens 118 PLEKHA4 57664 Affinity Capture-MS Homo sapiens 119 SIRT6   Affinity Capture-MS Homo sapiens 120 ANKHD1-EIF4EBP3   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 121 CPSF6 11052 Affinity Capture-MS Homo sapiens 122 MRPS31   Affinity Capture-MS Homo sapiens 123 SNRPA 6626 Affinity Capture-MS Homo sapiens 124 PPP2R2D 55844 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 125 LENG8   Affinity Capture-MS Homo sapiens 126 RPAP2   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 127 MKRN3   Two-hybrid Homo sapiens 128 MRPS15   Affinity Capture-MS Homo sapiens 129 EXOSC1 51013 Affinity Capture-MS Homo sapiens 130 PAPOLG   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 131 BUB3 9184 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 132 HNRNPK 3190 Two-hybrid Homo sapiens 133 SRGN 5552 Affinity Capture-MS Homo sapiens 134 DHX40   Proximity Label-MS Homo sapiens 135 C20orf197   Affinity Capture-MS Homo sapiens 136 KHDRBS2   Two-hybrid Homo sapiens 137 C1D   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 138 MOV10 4343 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 139 SMYD2 56950 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 140 VPS26B 112936 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 141 RTCB 51493 Affinity Capture-MS Homo sapiens 142 MAPK9 5601 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 143 UPF1 5976 Affinity Capture-MS Homo sapiens 144 RPL23A 6147 Cross-Linking-MS (XL-MS) Homo sapiens Cross-Linking-MS (XL-MS) Homo sapiens 145 PTGFR 5737 Cross-Linking-MS (XL-MS) Homo sapiens 146 DNAJC17   Proximity Label-MS Homo sapiens 147 HSF2BP   Two-hybrid Homo sapiens 148 SSRP1 6749 Affinity Capture-MS Homo sapiens 149 FBXO38 81545 Proximity Label-MS Homo sapiens 150 ZNF467   Affinity Capture-MS Homo sapiens 151 UNC119B 84747 Affinity Capture-MS Homo sapiens View the network

Pathways in which ZFC3H1 is involved

No pathways found