Gene description for SH3PXD2A
Gene name SH3 and PX domains 2A
Gene symbol SH3PXD2A
Other names/aliases FISH
SH3MD1
TKS5
Species Homo sapiens
 Database cross references - SH3PXD2A
ExoCarta ExoCarta_9644
Vesiclepedia VP_9644
Entrez Gene 9644
HGNC 23664
UniProt Q5TCZ1  
 SH3PXD2A identified in exosomes derived from the following tissue/cell type
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
Bone marrow mesenchymal stem cells 36408942    
 Gene ontology annotations for SH3PXD2A
Molecular Function
    protease binding GO:0002020 IEA
    protein binding GO:0005515 IPI
    phosphatidylinositol-4,5-bisphosphate binding GO:0005546 IEA
    phosphatidylinositol-5-phosphate binding GO:0010314 IEA
    superoxide-generating NADPH oxidase activator activity GO:0016176 IBA
    phosphatidylinositol-3-phosphate binding GO:0032266 IEA
    phosphatidylinositol-3,4-bisphosphate binding GO:0043325 IEA
    phosphatidylinositol-4-phosphate binding GO:0070273 IEA
Biological Process
    in utero embryonic development GO:0001701 IEA
    superoxide metabolic process GO:0006801 IDA
    superoxide metabolic process GO:0006801 IMP
    superoxide anion generation GO:0042554 IBA
    osteoclast fusion GO:0072675 IMP
Subcellular Localization
    podosome GO:0002102 IDA
    cytoplasm GO:0005737 IBA
    cytosol GO:0005829 TAS
    cell projection GO:0042995 IEA
    anchoring junction GO:0070161 IEA
 Experiment description of studies that identified SH3PXD2A in exosomes
1
Experiment ID 489
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 6
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
2
Experiment ID 490
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 7
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
3
Experiment ID 491
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 8
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
4
Experiment ID 492
MISEV standards
EM
Biophysical techniques
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
Canx
Negative markers
NTA
Particle analysis
Identified molecule Protein
Identification method Mass spectrometry
PubMed ID 36408942    
Organism Rattus norvegicus
Experiment description Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors "Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name Proteomics
Publication year 2023
Sample Bone marrow mesenchymal stem cells
Sample name BMSC - Passage 9
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectometry
 Protein-protein interactions for SH3PXD2A
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 HNRNPH1 3187
Affinity Capture-RNA Homo sapiens
2 HDAC4  
Affinity Capture-MS Homo sapiens
3 KSR1  
Affinity Capture-MS Homo sapiens
4 RALGPS2 55103
Affinity Capture-MS Homo sapiens
5 RIN3  
Affinity Capture-MS Homo sapiens
6 SH3BP4 23677
Affinity Capture-MS Homo sapiens
7 FGD1  
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
8 YWHAE 7531
Affinity Capture-MS Homo sapiens
9 NAV1 89796
Affinity Capture-MS Homo sapiens
10 CDC25B 994
Affinity Capture-MS Homo sapiens
11 SRGAP2 23380
Affinity Capture-MS Homo sapiens
12 CAMSAP2  
Affinity Capture-MS Homo sapiens
13 CBY1  
Affinity Capture-MS Homo sapiens
14 RTN4 57142
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
15 ADAM19 8728
Affinity Capture-MS Homo sapiens
16 KIF13B 23303
Affinity Capture-MS Homo sapiens
17 MLLT4 4301
Affinity Capture-MS Homo sapiens
18 ZBTB21  
Affinity Capture-MS Homo sapiens
19 RASAL2 9462
Affinity Capture-MS Homo sapiens
20 ZNF638 27332
Affinity Capture-MS Homo sapiens
21 RAB3IP  
Affinity Capture-MS Homo sapiens
22 KHDRBS1 10657
Protein-peptide Homo sapiens
23 YWHAG 7532
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
24 TIAM1  
Affinity Capture-MS Homo sapiens
25 PHLDB2 90102
Affinity Capture-MS Homo sapiens
26 Mib1  
Affinity Capture-MS Mus musculus
27 PTPN14 5784
Affinity Capture-MS Homo sapiens
28 YWHAH 7533
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
29 LRFN1  
Affinity Capture-MS Homo sapiens
30 KIAA1804  
Affinity Capture-MS Homo sapiens
31 MELK  
Affinity Capture-MS Homo sapiens
32 YWHAB 7529
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
33 AGAP1  
Affinity Capture-MS Homo sapiens
34 CDK16 5127
Affinity Capture-MS Homo sapiens
35 FASLG 356
Protein-peptide Homo sapiens
36 MIB1 57534
Affinity Capture-MS Homo sapiens
37 ANKRD34A  
Affinity Capture-MS Homo sapiens
38 USP21  
Affinity Capture-MS Homo sapiens
39 FAM110A  
Affinity Capture-MS Homo sapiens
40 SIPA1L1 26037
Affinity Capture-MS Homo sapiens
41 PRSS12 8492
Affinity Capture-MS Homo sapiens
42 TESK2  
Affinity Capture-MS Homo sapiens
43 HDAC7  
Affinity Capture-MS Homo sapiens
44 NTRK1 4914
Affinity Capture-MS Homo sapiens
45 CHEK1  
Affinity Capture-MS Homo sapiens
46 LPIN3 64900
Affinity Capture-MS Homo sapiens
47 YWHAQ 10971
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
48 FAM110B  
Affinity Capture-MS Homo sapiens
49 TANC2  
Affinity Capture-MS Homo sapiens
50 KCTD3  
Affinity Capture-MS Homo sapiens
51 LARP1 23367
Affinity Capture-MS Homo sapiens
52 LIMA1 51474
Affinity Capture-MS Homo sapiens
53 KIF1B 23095
Affinity Capture-MS Homo sapiens
54 FNBP1L 54874
Affinity Capture-MS Homo sapiens
55 DCLK1 9201
Affinity Capture-MS Homo sapiens
56 AHNAK 79026
Cross-Linking-MS (XL-MS) Homo sapiens
57 PRKAA2 5563
Affinity Capture-MS Homo sapiens
58 OSBPL6  
Affinity Capture-MS Homo sapiens
59 INPP5E 56623
Affinity Capture-MS Homo sapiens
60 TRAF6 7189
Affinity Capture-MS Homo sapiens
61 YWHAZ 7534
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
62 CTTN 2017
Affinity Capture-Western Homo sapiens
63 NADK 65220
Affinity Capture-MS Homo sapiens
64 EPRS 2058
Cross-Linking-MS (XL-MS) Homo sapiens
65 SYDE1 85360
Affinity Capture-MS Homo sapiens
66 PLEKHA5 54477
Affinity Capture-MS Homo sapiens
67 CDC25C  
Affinity Capture-MS Homo sapiens
68 PLIN1  
Cross-Linking-MS (XL-MS) Homo sapiens
69 PTPN13 5783
Affinity Capture-MS Homo sapiens
70 GIGYF1  
Affinity Capture-MS Homo sapiens
71 RAB11FIP2  
Affinity Capture-MS Homo sapiens
72 CGN  
Affinity Capture-MS Homo sapiens
73 KIAA0368 23392
Affinity Capture-MS Homo sapiens
74 PRKAB2 5565
Affinity Capture-MS Homo sapiens
75 EIF4E2  
Affinity Capture-MS Homo sapiens
76 TBC1D25  
Affinity Capture-MS Homo sapiens
77 DENND4C 55667
Affinity Capture-MS Homo sapiens
78 DEPDC1B 55789
Affinity Capture-MS Homo sapiens
79 SH3RF3  
Affinity Capture-MS Homo sapiens
80 GIGYF2 26058
Affinity Capture-MS Homo sapiens
81 STARD13 90627
Affinity Capture-MS Homo sapiens
82 MAPKAP1 79109
Affinity Capture-MS Homo sapiens
83 OVOS2  
Affinity Capture-MS Homo sapiens
84 FAM53C 51307
Affinity Capture-MS Homo sapiens
85 GRB2 2885
Affinity Capture-MS Homo sapiens
86 ZBED4 9889
Cross-Linking-MS (XL-MS) Homo sapiens
87 SVIL 6840
Two-hybrid Homo sapiens
88 RTKN 6242
Affinity Capture-MS Homo sapiens
89 DENND1A 57706
Affinity Capture-MS Homo sapiens
90 PPM1H  
Affinity Capture-MS Homo sapiens
91 SRSF12  
Affinity Capture-MS Homo sapiens
92 RPTOR 57521
Affinity Capture-MS Homo sapiens
93 ELAVL1 1994
Affinity Capture-RNA Homo sapiens
94 ZNF764 92595
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
95 EDC3 80153
Affinity Capture-MS Homo sapiens
96 ADAM15 8751
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
97 GAB2 9846
Affinity Capture-MS Homo sapiens
98 NF1 4763
Affinity Capture-MS Homo sapiens
99 DENND4A 10260
Affinity Capture-MS Homo sapiens
100 PLEKHA7 144100
Affinity Capture-MS Homo sapiens
101 KIF1C 10749
Affinity Capture-MS Homo sapiens
102 MAST3  
Affinity Capture-MS Homo sapiens
103 MAGI1  
Affinity Capture-MS Homo sapiens
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