Gene ontology annotations for EPS15L1
Experiment description of studies that identified EPS15L1 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
363
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
6
Experiment ID
364
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
7
Experiment ID
365
MISEV standards
✘
Biophysical techniques
✔
TSG101|GAPDH|AQP1|CD151|CD81|CD82|CD9|EPCAM|FLOT1|FLOT2|ICAM1|ITGA2B|LAMP2|RAB35|RAB5A|RAB5B|SDCBP|TFRC|UCHL1
Enriched markers
✔
DCLK1
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
33991177
Organism
Homo sapiens
Experiment description
Cancer stem cell marker DCLK1 reprograms small extracellular vesicles toward migratory phenotype in gastric cancer cells
Authors
"Carli ALE, Afshar-Sterle S, Rai A, Fang H, O'Keefe R, Tse J, Ferguson FM, Gray NS, Ernst M, Greening DW, Buchert M."
Journal name
Proteomics
Publication year
2021
Sample
Gastric cancer cells
Sample name
MKN1 - 100K pellet
Isolation/purification methods
Differential centrifugation Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
8
Experiment ID
488
MISEV standards
✔
EM
Biophysical techniques
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Homo sapiens
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Mesenchymal stem cells
Sample name
UCMSC
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
9
Experiment ID
231
MISEV standards
✘
Biophysical techniques
✔
Alix|CD63|CD9
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Western blotting Mass spectrometry
10
Experiment ID
232
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
11
Experiment ID
233
MISEV standards
✘
Biophysical techniques
✘
Enriched markers
✘
Negative markers
✘
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
"Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G."
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 3
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
12
Experiment ID
834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
13
Experiment ID
835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for EPS15L1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
TRAPPC2
6399
Two-hybrid
Homo sapiens
2
AP2S1
1175
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
3
SMC3
9126
Affinity Capture-MS
Homo sapiens
4
AP2B1
163
Proximity Label-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
5
KIAA1107
Affinity Capture-MS
Homo sapiens
6
ATG9A
79065
Proximity Label-MS
Homo sapiens
7
SYCE1
Affinity Capture-MS
Homo sapiens
8
RIN3
Affinity Capture-MS
Homo sapiens
9
Numb
Affinity Capture-MS
Mus musculus
10
FCHO1
Affinity Capture-MS
Homo sapiens
11
EPS15
2060
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
12
Ndc80
Affinity Capture-MS
Mus musculus
13
RNMT
8731
Co-fractionation
Homo sapiens
14
UBC
7316
Reconstituted Complex
Homo sapiens
15
TRAPPC2B
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
16
DEGS1
Affinity Capture-MS
Homo sapiens
17
APEX1
328
Affinity Capture-RNA
Homo sapiens
18
RNPS1
10921
Affinity Capture-MS
Homo sapiens
19
DYNC1LI2
1783
Proximity Label-MS
Homo sapiens
20
MCM2
4171
Affinity Capture-MS
Homo sapiens
21
AP2A1
160
Affinity Capture-MS
Homo sapiens
22
SPAG9
9043
Affinity Capture-MS
Homo sapiens
23
MCM6
4175
Affinity Capture-MS
Homo sapiens
24
UBQLN1
29979
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
25
LURAP1L
Affinity Capture-MS
Homo sapiens
26
STX6
10228
Proximity Label-MS
Homo sapiens
27
ATG16L1
55054
Affinity Capture-MS
Homo sapiens
28
DVL2
1856
Affinity Capture-MS
Homo sapiens
29
KIF14
9928
Affinity Capture-MS
Homo sapiens
30
PRNP
5621
Affinity Capture-MS
Homo sapiens
31
C15orf59
Affinity Capture-MS
Homo sapiens
32
AURKA
6790
Affinity Capture-MS
Homo sapiens
33
KIFC1
3833
Affinity Capture-MS
Homo sapiens
34
MIB1
57534
Proximity Label-MS
Homo sapiens
35
AGFG1
3267
Phenotypic Enhancement
Homo sapiens
36
NCKIPSD
51517
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
37
NECAP2
55707
Affinity Capture-MS
Homo sapiens
38
CDH1
999
Proximity Label-MS
Homo sapiens
39
NTRK1
4914
Affinity Capture-MS
Homo sapiens
40
DCAF7
10238
Affinity Capture-MS
Homo sapiens
41
Odf2
Affinity Capture-MS
Mus musculus
42
HLA-DRB5
3127
Affinity Capture-MS
Homo sapiens
43
PLK1
5347
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
44
AP1B1
162
Affinity Capture-MS
Homo sapiens
45
RUNDC3A
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
46
GAREM
Affinity Capture-MS
Homo sapiens
47
GNG5
2787
Two-hybrid
Homo sapiens
48
PHLPP1
Proximity Label-MS
Homo sapiens
49
STON2
85439
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
50
Rab5c
19345
Affinity Capture-MS
Mus musculus
51
RNF40
9810
Affinity Capture-MS
Homo sapiens
52
HSF1
Affinity Capture-MS
Homo sapiens
53
Zwint
Affinity Capture-MS
Mus musculus
54
CEP63
Affinity Capture-MS
Homo sapiens
55
XPO1
7514
Affinity Capture-MS
Homo sapiens
56
USP15
9958
Affinity Capture-MS
Homo sapiens
57
MCM4
4173
Affinity Capture-MS
Homo sapiens
58
GTF3C4
9329
Affinity Capture-MS
Homo sapiens
59
SEC24A
10802
Co-fractionation
Homo sapiens
60
NXF1
10482
Affinity Capture-RNA
Homo sapiens
61
AP2M1
1173
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
62
BIRC6
57448
Co-fractionation
Homo sapiens
63
Otud5
Affinity Capture-MS
Mus musculus
64
GBF1
8729
Co-fractionation
Homo sapiens
65
FCHO2
115548
Affinity Capture-MS
Homo sapiens
66
EPN1
29924
Affinity Capture-Western
Homo sapiens
67
AP2A2
161
Affinity Capture-MS
Homo sapiens
68
SBNO1
55206
Affinity Capture-MS
Homo sapiens
69
NDC80
10403
Affinity Capture-MS
Homo sapiens
70
SGIP1
Affinity Capture-MS
Homo sapiens
71
CROCC
9696
Affinity Capture-MS
Homo sapiens
72
SMC1A
8243
Affinity Capture-MS
Homo sapiens
73
AGFG2
Phenotypic Enhancement
Homo sapiens
74
ANK3
Affinity Capture-MS
Homo sapiens
75
NCAPG
64151
Co-fractionation
Homo sapiens
76
PLEKHA4
57664
Affinity Capture-MS
Homo sapiens
77
TP53BP2
Affinity Capture-MS
Homo sapiens
78
ITSN1
6453
Two-hybrid
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
79
GRB2
2885
Affinity Capture-MS
Homo sapiens
80
LSR
51599
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
81
Fcho2
Affinity Capture-MS
Mus musculus
82
BFSP1
Affinity Capture-MS
Homo sapiens
83
ZZEF1
23140
Co-fractionation
Homo sapiens
84
SOX4
Affinity Capture-MS
Homo sapiens
85
SOS1
6654
Affinity Capture-MS
Homo sapiens
86
PDZD8
118987
Affinity Capture-MS
Homo sapiens
87
SPC25
57405
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
88
ITSN2
50618
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Co-fractionation
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
89
MOV10
4343
Affinity Capture-RNA
Homo sapiens
90
HNRNPH3
3189
Co-fractionation
Homo sapiens
91
GAPVD1
26130
Affinity Capture-MS
Homo sapiens
92
ZCCHC10
Affinity Capture-MS
Homo sapiens
93
CLTA
1211
Proximity Label-MS
Homo sapiens
94
CDR2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
95
PRPF4
9128
Co-fractionation
Homo sapiens
96
MYO6
4646
Proximity Label-MS
Homo sapiens
97
IVNS1ABP
Affinity Capture-MS
Homo sapiens
98
CDK11A
728642
Affinity Capture-MS
Homo sapiens
99
ZNF365
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which EPS15L1 is involved